RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 CDHR2Q9BYE9 1310 aa31.81■■■□□ 2.68
UFD1-204ENST00000447868 ZC3H4Q9UPT8 1303 aaKnown RBP31.81■■■□□ 2.68
UFD1-204ENST00000447868 GCKRQ14397 625 aa31.81■■■□□ 2.68
UFD1-204ENST00000447868 SSH1Q8WYL5 1049 aa31.81■■■□□ 2.68
UFD1-204ENST00000447868 BCL2L13Q9BXK5 485 aa31.81■■■□□ 2.68
UFD1-204ENST00000447868 SNED1Q8TER0 1413 aa31.81■■■□□ 2.68
UFD1-204ENST00000447868 UBE3BQ7Z3V4 1068 aa31.79■■■□□ 2.68
UFD1-204ENST00000447868 CELF1Q92879 486 aaKnown RBP31.79■■■□□ 2.68
UFD1-204ENST00000447868 CCDC85AQ96PX6 553 aaPredicted RBP31.79■■■□□ 2.68
UFD1-204ENST00000447868 PSMD1Q99460 953 aa31.78■■■□□ 2.68
UFD1-204ENST00000447868 KDM2BQ8NHM5 1336 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 H7C1W4 665 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 CCDC152Q4G0S7 254 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 GRIPAP1Q4V328 841 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 BEND3Q5T5X7 828 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 SLC4A10Q6U841 1118 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 SP8Q8IXZ3 490 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 NMRK2Q9NPI5 230 aa31.77■■■□□ 2.68
UFD1-204ENST00000447868 COL4A1P02462 1669 aa31.76■■■□□ 2.68
UFD1-204ENST00000447868 IARSP41252 1262 aaKnown RBP31.76■■■□□ 2.67
UFD1-204ENST00000447868 SEC31BQ9NQW1 1179 aa31.76■■■□□ 2.67
UFD1-204ENST00000447868 ALDH1L2Q3SY69 923 aa31.75■■■□□ 2.67
UFD1-204ENST00000447868 SMC4Q9NTJ3 1288 aa31.75■■■□□ 2.67
UFD1-204ENST00000447868 CTSWP56202 376 aa31.74■■■□□ 2.67
UFD1-204ENST00000447868 MYH3P11055 1940 aa31.73■■■□□ 2.67
UFD1-204ENST00000447868 GLTPD2A6NH11 291 aa31.73■■■□□ 2.67
UFD1-204ENST00000447868 CT47B1P0C2W7 299 aaPredicted RBP31.73■■■□□ 2.67
UFD1-204ENST00000447868 TMC4Q7Z404 712 aa31.73■■■□□ 2.67
UFD1-204ENST00000447868 DPP8Q6V1X1 898 aaPredicted RBP31.72■■■□□ 2.67
UFD1-204ENST00000447868 PTPRCP08575 1304 aa31.72■■■□□ 2.67
UFD1-204ENST00000447868 KIF3CO14782 793 aa31.71■■■□□ 2.67
UFD1-204ENST00000447868 CASP7P55210 303 aa31.71■■■□□ 2.67
UFD1-204ENST00000447868 RPS8P62241 208 aaKnown RBP31.71■■■□□ 2.67
UFD1-204ENST00000447868 DPY19L2Q6NUT2 758 aa31.71■■■□□ 2.67
UFD1-204ENST00000447868 MPNDQ8N594 471 aa31.71■■■□□ 2.67
UFD1-204ENST00000447868 RRAGCQ9HB90 399 aa31.71■■■□□ 2.67
UFD1-204ENST00000447868 TTLL11Q8NHH1 800 aa31.7■■■□□ 2.67
UFD1-204ENST00000447868 SRCIN1Q9C0H9 1055 aa31.7■■■□□ 2.67
UFD1-204ENST00000447868 LRRC37AA6NMS7 1700 aa31.69■■■□□ 2.66
UFD1-204ENST00000447868 LARGE2Q8N3Y3 721 aa31.68■■■□□ 2.66
UFD1-204ENST00000447868 GREM2Q9H772 168 aa31.68■■■□□ 2.66
UFD1-204ENST00000447868 ALDH1L1O75891 902 aa31.67■■■□□ 2.66
UFD1-204ENST00000447868 C1QTNF8P60827 252 aa31.67■■■□□ 2.66
UFD1-204ENST00000447868 SUPT20HQ8NEM7 779 aa31.67■■■□□ 2.66
UFD1-204ENST00000447868 JDP2Q8WYK2 163 aa31.67■■■□□ 2.66
UFD1-204ENST00000447868 PLA2G12BQ9BX93 195 aa31.67■■■□□ 2.66
UFD1-204ENST00000447868 PPIP5K2O43314 1243 aa31.66■■■□□ 2.66
UFD1-204ENST00000447868 AOC3Q16853 763 aa31.66■■■□□ 2.66
UFD1-204ENST00000447868 RTFDC1Q9BY42 306 aaPredicted RBP31.66■■■□□ 2.66
UFD1-204ENST00000447868 C9orf78Q9NZ63 289 aaPredicted RBP31.66■■■□□ 2.66
UFD1-204ENST00000447868 COL4A5P29400 1685 aa31.66■■■□□ 2.66
UFD1-204ENST00000447868 GRM8O00222 908 aa31.65■■■□□ 2.66
UFD1-204ENST00000447868 ANKRD18AQ8IVF6 992 aa31.65■■■□□ 2.66
UFD1-204ENST00000447868 NSFL1CQ9UNZ2 370 aaKnown RBP31.65■■■□□ 2.66
UFD1-204ENST00000447868 DDNO94850 711 aaPredicted RBP31.64■■■□□ 2.66
UFD1-204ENST00000447868 GPSM2P81274 684 aa31.64■■■□□ 2.66
UFD1-204ENST00000447868 CDC5LQ99459 802 aaKnown RBP31.64■■■□□ 2.66
UFD1-204ENST00000447868 ZNF541Q9H0D2 1346 aa31.64■■■□□ 2.66
UFD1-204ENST00000447868 RARSP54136 660 aaKnown RBP31.63■■■□□ 2.65
UFD1-204ENST00000447868 NOB1Q9ULX3 412 aaKnown RBP31.63■■■□□ 2.65
UFD1-204ENST00000447868 FZD9O00144 591 aa31.62■■■□□ 2.65
UFD1-204ENST00000447868 ZBED9Q6R2W3 1325 aa31.62■■■□□ 2.65
UFD1-204ENST00000447868 SPEF2Q9C093 1822 aa31.62■■■□□ 2.65
UFD1-204ENST00000447868 DUOX1Q9NRD9 1551 aa31.62■■■□□ 2.65
UFD1-204ENST00000447868 RTL9Q8NET4 1388 aa31.61■■■□□ 2.65
UFD1-204ENST00000447868 FAM161AQ3B820 660 aa31.61■■■□□ 2.65
UFD1-204ENST00000447868 NIM1KQ8IY84 436 aa31.61■■■□□ 2.65
UFD1-204ENST00000447868 C16orf71Q8IYS4 520 aaPredicted RBP31.61■■■□□ 2.65
UFD1-204ENST00000447868 CSF1RP07333 972 aa31.6■■■□□ 2.65
UFD1-204ENST00000447868 VPS33BQ9H267 617 aa31.6■■■□□ 2.65
UFD1-204ENST00000447868 WDR90Q96KV7 1748 aa31.6■■■□□ 2.65
UFD1-204ENST00000447868 C6orf229H3BNL8 230 aa31.59■■■□□ 2.65
UFD1-204ENST00000447868 VEGFAP15692 232 aaPredicted RBP31.59■■■□□ 2.65
UFD1-204ENST00000447868 ITGA6P23229 1130 aa31.59■■■□□ 2.65
UFD1-204ENST00000447868 FOXO4P98177 505 aa31.59■■■□□ 2.65
UFD1-204ENST00000447868 ANKIB1Q9P2G1 1089 aa31.59■■■□□ 2.65
UFD1-204ENST00000447868 EIF6P56537 245 aaKnown RBP31.58■■■□□ 2.65
UFD1-204ENST00000447868 POLLQ9UGP5 575 aa31.58■■■□□ 2.65
UFD1-204ENST00000447868 CHMP3Q9Y3E7 222 aa31.58■■■□□ 2.65
UFD1-204ENST00000447868 POTECB2RU33 542 aa31.57■■■□□ 2.64
UFD1-204ENST00000447868 BRPF1P55201 1214 aaPredicted RBP31.57■■■□□ 2.64
UFD1-204ENST00000447868 KIAA2012Q0VF49 1180 aa31.57■■■□□ 2.64
UFD1-204ENST00000447868 EPHA10Q5JZY3 1008 aa31.57■■■□□ 2.64
UFD1-204ENST00000447868 LTBP1Q14766 1721 aa31.57■■■□□ 2.64
UFD1-204ENST00000447868 TOMM70O94826 608 aa31.56■■■□□ 2.64
UFD1-204ENST00000447868 NBPF7P0C2Y1 421 aaPredicted RBP31.56■■■□□ 2.64
UFD1-204ENST00000447868 GPR101Q96P66 508 aaPredicted RBP31.56■■■□□ 2.64
UFD1-204ENST00000447868 RIMBP2O15034 1052 aa31.55■■■□□ 2.64
UFD1-204ENST00000447868 IGHMBP2P38935 993 aaKnown RBP31.55■■■□□ 2.64
UFD1-204ENST00000447868 WASHC4Q2M389 1173 aa31.55■■■□□ 2.64
UFD1-204ENST00000447868 LMBR1LQ6UX01 489 aa31.55■■■□□ 2.64
UFD1-204ENST00000447868 TBC1D16Q8TBP0 767 aa31.55■■■□□ 2.64
UFD1-204ENST00000447868 BSDC1Q9NW68 430 aaPredicted RBP31.55■■■□□ 2.64
UFD1-204ENST00000447868 GJA3Q9Y6H8 435 aa31.55■■■□□ 2.64
UFD1-204ENST00000447868 UFL1O94874 794 aa31.54■■■□□ 2.64
UFD1-204ENST00000447868 SUCLG2Q96I99 432 aa31.54■■■□□ 2.64
UFD1-204ENST00000447868 API5Q9BZZ5 524 aaKnown RBP31.54■■■□□ 2.64
UFD1-204ENST00000447868 PODXL2Q9NZ53 605 aa31.54■■■□□ 2.64
UFD1-204ENST00000447868 ANKRD18BA2A2Z9 1011 aa31.53■■■□□ 2.64
UFD1-204ENST00000447868 GGA1Q9UJY5 639 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms