RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 DPP8Q6V1X1 898 aaPredicted RBP23.57■■□□□ 1.36
COL9A1-205ENST00000447041 PNMA8AQ86V59 439 aaPredicted RBP23.57■■□□□ 1.36
COL9A1-205ENST00000447041 ITGBL1O95965 494 aaPredicted RBP23.56■■□□□ 1.36
COL9A1-205ENST00000447041 GOLGA2Q08379 1002 aa23.56■■□□□ 1.36
COL9A1-205ENST00000447041 RIC3Q7Z5B4 369 aa23.56■■□□□ 1.36
COL9A1-205ENST00000447041 SUPT20HQ8NEM7 779 aa23.56■■□□□ 1.36
COL9A1-205ENST00000447041 MAP1SQ66K74 1059 aaPredicted RBP23.55■■□□□ 1.36
COL9A1-205ENST00000447041 MPNDQ8N594 471 aa23.55■■□□□ 1.36
COL9A1-205ENST00000447041 MKRN1Q9UHC7 482 aaKnown RBP23.55■■□□□ 1.36
COL9A1-205ENST00000447041 LMOD1P29536 600 aaPredicted RBP23.54■■□□□ 1.36
COL9A1-205ENST00000447041 EPS15P42566 896 aa23.54■■□□□ 1.36
COL9A1-205ENST00000447041 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
COL9A1-205ENST00000447041 TSR2Q969E8 191 aaKnown RBP23.54■■□□□ 1.36
COL9A1-205ENST00000447041 VPS33BQ9H267 617 aa23.54■■□□□ 1.36
COL9A1-205ENST00000447041 TRIM28Q13263 835 aaKnown RBP23.53■■□□□ 1.36
COL9A1-205ENST00000447041 SF3B3Q15393 1217 aaKnown RBP23.53■■□□□ 1.36
COL9A1-205ENST00000447041 CELF1Q92879 486 aaKnown RBP23.53■■□□□ 1.36
COL9A1-205ENST00000447041 MYD88Q99836 296 aa23.53■■□□□ 1.36
COL9A1-205ENST00000447041 IRS4O14654 1257 aaPredicted RBP23.52■■□□□ 1.36
COL9A1-205ENST00000447041 KIAA2012Q0VF49 1180 aa23.52■■□□□ 1.36
COL9A1-205ENST00000447041 ZNRF3Q9ULT6 936 aa23.52■■□□□ 1.36
COL9A1-205ENST00000447041 HSPA1AP0DMV8 641 aaKnown RBP23.51■■□□□ 1.35
COL9A1-205ENST00000447041 HSPA1BP0DMV9 641 aaKnown RBP23.51■■□□□ 1.35
COL9A1-205ENST00000447041 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
COL9A1-205ENST00000447041 CXCL9Q07325 125 aa23.51■■□□□ 1.35
COL9A1-205ENST00000447041 TMC4Q7Z404 712 aa23.51■■□□□ 1.35
COL9A1-205ENST00000447041 CNTROBQ8N137 903 aa23.51■■□□□ 1.35
COL9A1-205ENST00000447041 CNTNAP1P78357 1384 aa23.51■■□□□ 1.35
COL9A1-205ENST00000447041 CCDC30Q5VVM6 783 aa23.5■■□□□ 1.35
COL9A1-205ENST00000447041 ZBTB38Q8NAP3 1195 aaPredicted RBP23.5■■□□□ 1.35
COL9A1-205ENST00000447041 TMEM88BA6NKF7 163 aa23.49■■□□□ 1.35
COL9A1-205ENST00000447041 CCDC27Q2M243 656 aa23.49■■□□□ 1.35
COL9A1-205ENST00000447041 WWC1Q8IX03 1113 aa23.49■■□□□ 1.35
COL9A1-205ENST00000447041 COL13A1Q5TAT6 717 aaPredicted RBP23.48■■□□□ 1.35
COL9A1-205ENST00000447041 MRS2Q9HD23 443 aa23.48■■□□□ 1.35
COL9A1-205ENST00000447041 GPRC5DQ9NZD1 345 aa23.48■■□□□ 1.35
COL9A1-205ENST00000447041 YDJCA8MPS7 323 aa23.47■■□□□ 1.35
COL9A1-205ENST00000447041 RAD17O75943 681 aa23.46■■□□□ 1.35
COL9A1-205ENST00000447041 GMPSP49915 693 aaPredicted RBP23.46■■□□□ 1.35
COL9A1-205ENST00000447041 GPSM2P81274 684 aa23.46■■□□□ 1.35
COL9A1-205ENST00000447041 CIAPIN1Q6FI81 312 aa23.46■■□□□ 1.35
COL9A1-205ENST00000447041 USP50Q70EL3 339 aaPredicted RBP23.46■■□□□ 1.35
COL9A1-205ENST00000447041 CCDC191Q8NCU4 936 aa23.46■■□□□ 1.35
COL9A1-205ENST00000447041 JARID2Q92833 1246 aaPredicted RBP23.46■■□□□ 1.35
COL9A1-205ENST00000447041 METTL22Q9BUU2 404 aaPredicted RBP23.46■■□□□ 1.35
COL9A1-205ENST00000447041 NSFL1CQ9UNZ2 370 aaKnown RBP23.46■■□□□ 1.35
COL9A1-205ENST00000447041 ZNF316A6NFI3 1004 aaPredicted RBP23.45■■□□□ 1.34
COL9A1-205ENST00000447041 DDX58O95786 925 aaKnown RBP23.45■■□□□ 1.34
COL9A1-205ENST00000447041 PCCAP05165 728 aaPredicted RBP23.45■■□□□ 1.34
COL9A1-205ENST00000447041 SEC31BQ9NQW1 1179 aa23.45■■□□□ 1.34
COL9A1-205ENST00000447041 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
COL9A1-205ENST00000447041 MAP3K2Q9Y2U5 619 aa23.45■■□□□ 1.34
COL9A1-205ENST00000447041 ANP32CO43423 234 aa23.44■■□□□ 1.34
COL9A1-205ENST00000447041 FMR1Q06787 632 aaKnown RBP eCLIP23.44■■□□□ 1.34
COL9A1-205ENST00000447041 CHMP4AQ9BY43 222 aa23.44■■□□□ 1.34
COL9A1-205ENST00000447041 ADARB2Q9NS39 739 aaKnown RBP23.44■■□□□ 1.34
COL9A1-205ENST00000447041 POLLQ9UGP5 575 aa23.44■■□□□ 1.34
COL9A1-205ENST00000447041 WASHC4Q2M389 1173 aa23.43■■□□□ 1.34
COL9A1-205ENST00000447041 TWISTNBQ3B726 338 aaPredicted RBP23.43■■□□□ 1.34
COL9A1-205ENST00000447041 CDHR2Q9BYE9 1310 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 PI4KAP2A4QPH2 592 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 C6orf229H3BNL8 230 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 RIMBP2O15034 1052 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 VEGFBP49765 207 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 RPS8P62241 208 aaKnown RBP23.42■■□□□ 1.34
COL9A1-205ENST00000447041 PI4KAP1Q8N8J0 262 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 GPR101Q96P66 508 aaPredicted RBP23.42■■□□□ 1.34
COL9A1-205ENST00000447041 CCDC85AQ96PX6 553 aaPredicted RBP23.42■■□□□ 1.34
COL9A1-205ENST00000447041 BCL2L13Q9BXK5 485 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 STK31Q9BXU1 1019 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 DBNDD1Q9H9R9 158 aa23.42■■□□□ 1.34
COL9A1-205ENST00000447041 TRPM7Q96QT4 1865 aa23.41■■□□□ 1.34
COL9A1-205ENST00000447041 IL16Q14005 1332 aa23.41■■□□□ 1.34
COL9A1-205ENST00000447041 PDE8AO60658 829 aa23.41■■□□□ 1.34
COL9A1-205ENST00000447041 IGKV5-2P06315 115 aa23.41■■□□□ 1.34
COL9A1-205ENST00000447041 TNIP1Q15025 636 aa23.41■■□□□ 1.34
COL9A1-205ENST00000447041 KSR2Q6VAB6 950 aa23.41■■□□□ 1.34
COL9A1-205ENST00000447041 G2E3Q7L622 706 aa23.41■■□□□ 1.34
COL9A1-205ENST00000447041 SHTN1A0MZ66 631 aa23.4■■□□□ 1.34
COL9A1-205ENST00000447041 TRAF5O00463 557 aa23.4■■□□□ 1.34
COL9A1-205ENST00000447041 HSP90B1P14625 803 aaKnown RBP23.4■■□□□ 1.34
COL9A1-205ENST00000447041 CCDC152Q4G0S7 254 aa23.4■■□□□ 1.34
COL9A1-205ENST00000447041 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
COL9A1-205ENST00000447041 FANCIQ9NVI1 1328 aa23.39■■□□□ 1.34
COL9A1-205ENST00000447041 SPEF2Q9C093 1822 aa23.39■■□□□ 1.33
COL9A1-205ENST00000447041 RASSF10A6NK89 507 aa23.39■■□□□ 1.33
COL9A1-205ENST00000447041 TBC1D16Q8TBP0 767 aa23.39■■□□□ 1.33
COL9A1-205ENST00000447041 ABT1Q9ULW3 272 aaKnown RBP23.39■■□□□ 1.33
COL9A1-205ENST00000447041 ZBTB12Q9Y330 459 aaPredicted RBP23.39■■□□□ 1.33
COL9A1-205ENST00000447041 MYH3P11055 1940 aa23.39■■□□□ 1.33
COL9A1-205ENST00000447041 PSMD14O00487 310 aa23.38■■□□□ 1.33
COL9A1-205ENST00000447041 ECE2O60344 883 aa23.38■■□□□ 1.33
COL9A1-205ENST00000447041 DOK7Q18PE1 504 aa23.38■■□□□ 1.33
COL9A1-205ENST00000447041 CWF19L2Q2TBE0 894 aaKnown RBP23.38■■□□□ 1.33
COL9A1-205ENST00000447041 NCBP3Q53F19 620 aaKnown RBP23.38■■□□□ 1.33
COL9A1-205ENST00000447041 TRPM4Q8TD43 1214 aa23.38■■□□□ 1.33
COL9A1-205ENST00000447041 EYA3Q99504 573 aa23.38■■□□□ 1.33
COL9A1-205ENST00000447041 SLC4A2P04920 1241 aa23.37■■□□□ 1.33
COL9A1-205ENST00000447041 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
COL9A1-205ENST00000447041 DEFB115Q30KQ5 88 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms