RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 HACL1Q9UJ83 578 aa14.53□□□□□ -0.08
CDCA3-203ENST00000446553 IRS4O14654 1257 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-203ENST00000446553 PCCAP05165 728 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-203ENST00000446553 DPP8Q6V1X1 898 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-203ENST00000446553 MPNDQ8N594 471 aa14.52□□□□□ -0.09
CDCA3-203ENST00000446553 JMYQ8N9B5 988 aa14.52□□□□□ -0.09
CDCA3-203ENST00000446553 TSR2Q969E8 191 aaKnown RBP14.52□□□□□ -0.09
CDCA3-203ENST00000446553 STK31Q9BXU1 1019 aa14.52□□□□□ -0.09
CDCA3-203ENST00000446553 ADAMTSL1Q8N6G6 1762 aa14.52□□□□□ -0.09
CDCA3-203ENST00000446553 PPIP5K2O43314 1243 aa14.51□□□□□ -0.09
CDCA3-203ENST00000446553 KIAA2012Q0VF49 1180 aa14.51□□□□□ -0.09
CDCA3-203ENST00000446553 TWISTNBQ3B726 338 aaPredicted RBP14.51□□□□□ -0.09
CDCA3-203ENST00000446553 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
CDCA3-203ENST00000446553 NIM1KQ8IY84 436 aa14.51□□□□□ -0.09
CDCA3-203ENST00000446553 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
CDCA3-203ENST00000446553 EPHX2P34913 555 aa14.5□□□□□ -0.09
CDCA3-203ENST00000446553 MYD88Q99836 296 aa14.5□□□□□ -0.09
CDCA3-203ENST00000446553 CWC25Q9NXE8 425 aaPredicted RBP14.5□□□□□ -0.09
CDCA3-203ENST00000446553 ZNRF3Q9ULT6 936 aa14.5□□□□□ -0.09
CDCA3-203ENST00000446553 TAF1P21675 1872 aa14.5□□□□□ -0.09
CDCA3-203ENST00000446553 PASKQ96RG2 1323 aa14.49□□□□□ -0.09
CDCA3-203ENST00000446553 CDHR2Q9BYE9 1310 aa14.49□□□□□ -0.09
CDCA3-203ENST00000446553 PDE8AO60658 829 aa14.49□□□□□ -0.09
CDCA3-203ENST00000446553 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
CDCA3-203ENST00000446553 POTEJP0CG39 1038 aa14.49□□□□□ -0.09
CDCA3-203ENST00000446553 AOC3Q16853 763 aa14.49□□□□□ -0.09
CDCA3-203ENST00000446553 CREBZFQ9NS37 354 aa14.49□□□□□ -0.09
CDCA3-203ENST00000446553 PCNTO95613 3336 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 DUOX1Q9NRD9 1551 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 FANCIQ9NVI1 1328 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 PI4KAP2A4QPH2 592 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 LMOD1P29536 600 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-203ENST00000446553 RPS8P62241 208 aaKnown RBP14.48□□□□□ -0.09
CDCA3-203ENST00000446553 NEXNQ0ZGT2 675 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 SLC51AQ86UW1 340 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 PI4KAP1Q8N8J0 262 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 CELF1Q92879 486 aaKnown RBP14.48□□□□□ -0.09
CDCA3-203ENST00000446553 MAP3K2Q9Y2U5 619 aa14.48□□□□□ -0.09
CDCA3-203ENST00000446553 ITGBL1O95965 494 aaPredicted RBP14.47□□□□□ -0.09
CDCA3-203ENST00000446553 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
CDCA3-203ENST00000446553 SCNN1DP51172 638 aa14.47□□□□□ -0.09
CDCA3-203ENST00000446553 HTRA3P83110 453 aa14.47□□□□□ -0.09
CDCA3-203ENST00000446553 CCDC152Q4G0S7 254 aa14.47□□□□□ -0.09
CDCA3-203ENST00000446553 PODXL2Q9NZ53 605 aa14.47□□□□□ -0.09
CDCA3-203ENST00000446553 LTBP1Q14766 1721 aa14.46□□□□□ -0.09
CDCA3-203ENST00000446553 VAMP4O75379 141 aa14.46□□□□□ -0.09
CDCA3-203ENST00000446553 IGKV5-2P06315 115 aa14.46□□□□□ -0.09
CDCA3-203ENST00000446553 CXCL9Q07325 125 aa14.46□□□□□ -0.09
CDCA3-203ENST00000446553 TNIP1Q15025 636 aa14.46□□□□□ -0.09
CDCA3-203ENST00000446553 USP50Q70EL3 339 aaPredicted RBP14.46□□□□□ -0.09
CDCA3-203ENST00000446553 GJA3Q9Y6H8 435 aa14.46□□□□□ -0.09
CDCA3-203ENST00000446553 MYH3P11055 1940 aa14.45□□□□□ -0.1
CDCA3-203ENST00000446553 FLIIQ13045 1269 aa14.45□□□□□ -0.1
CDCA3-203ENST00000446553 EAPPQ56P03 285 aaPredicted RBP14.45□□□□□ -0.1
CDCA3-203ENST00000446553 RTL5Q5HYW3 569 aaPredicted RBP14.45□□□□□ -0.1
CDCA3-203ENST00000446553 CIAPIN1Q6FI81 312 aa14.45□□□□□ -0.1
CDCA3-203ENST00000446553 EYA3Q99504 573 aa14.45□□□□□ -0.1
CDCA3-203ENST00000446553 MYH16Q9H6N6 1097 aa14.45□□□□□ -0.1
CDCA3-203ENST00000446553 GPRC5DQ9NZD1 345 aa14.45□□□□□ -0.1
CDCA3-203ENST00000446553 RTL9Q8NET4 1388 aa14.45□□□□□ -0.1
CDCA3-203ENST00000446553 NEURL1BA8MQ27 555 aa14.44□□□□□ -0.1
CDCA3-203ENST00000446553 WASHC4Q2M389 1173 aa14.44□□□□□ -0.1
CDCA3-203ENST00000446553 ADARB2Q9NS39 739 aaKnown RBP14.44□□□□□ -0.1
CDCA3-203ENST00000446553 NSFL1CQ9UNZ2 370 aaKnown RBP14.44□□□□□ -0.1
CDCA3-203ENST00000446553 H7C1W4 665 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 EPS15P42566 896 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 CTSWP56202 376 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 G2E3Q7L622 706 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 CNTROBQ8N137 903 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 PLA2G12BQ9BX93 195 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 POLLQ9UGP5 575 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
CDCA3-203ENST00000446553 COL4A1P02462 1669 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 ZNF521Q96K83 1311 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 TMEM88BA6NKF7 163 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 GPSM2P81274 684 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 EXOSC9Q06265 439 aaKnown RBP14.42□□□□□ -0.1
CDCA3-203ENST00000446553 ANKRD18AQ8IVF6 992 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 FAM9BQ8IZU0 186 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 LINS1Q8NG48 757 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 TTLL11Q8NHH1 800 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 TBC1D16Q8TBP0 767 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 DNAAF4Q8WXU2 420 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 DPF2Q92785 391 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 CDC5LQ99459 802 aaKnown RBP14.42□□□□□ -0.1
CDCA3-203ENST00000446553 SEC31BQ9NQW1 1179 aa14.42□□□□□ -0.1
CDCA3-203ENST00000446553 YDJCA8MPS7 323 aa14.41□□□□□ -0.1
CDCA3-203ENST00000446553 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-203ENST00000446553 GCKRQ14397 625 aa14.41□□□□□ -0.1
CDCA3-203ENST00000446553 ZC3H15Q8WU90 426 aaKnown RBP14.41□□□□□ -0.1
CDCA3-203ENST00000446553 PGAP2Q9UHJ9 254 aa14.41□□□□□ -0.1
CDCA3-203ENST00000446553 CNTNAP1P78357 1384 aa14.4□□□□□ -0.1
CDCA3-203ENST00000446553 C6orf229H3BNL8 230 aa14.4□□□□□ -0.1
CDCA3-203ENST00000446553 RPS12P25398 132 aaKnown RBP14.4□□□□□ -0.1
CDCA3-203ENST00000446553 GMPSP49915 693 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-203ENST00000446553 CWF19L2Q2TBE0 894 aaKnown RBP14.4□□□□□ -0.1
CDCA3-203ENST00000446553 MAP1SQ66K74 1059 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-203ENST00000446553 ZC3H12CQ9C0D7 883 aaKnown RBP14.4□□□□□ -0.1
CDCA3-203ENST00000446553 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms