RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 ATP6V0A2Q9Y487 856 aa27.89■■■□□ 2.05
TRAF4-205ENST00000444415 DUOX1Q9NRD9 1551 aa27.88■■■□□ 2.05
TRAF4-205ENST00000444415 KIF3CO14782 793 aa27.88■■■□□ 2.05
TRAF4-205ENST00000444415 CASP7P55210 303 aa27.88■■■□□ 2.05
TRAF4-205ENST00000444415 GCKRQ14397 625 aa27.88■■■□□ 2.05
TRAF4-205ENST00000444415 BEND3Q5T5X7 828 aa27.88■■■□□ 2.05
TRAF4-205ENST00000444415 DDX46Q7L014 1031 aaKnown RBP27.88■■■□□ 2.05
TRAF4-205ENST00000444415 LTBP1Q14766 1721 aa27.87■■■□□ 2.05
TRAF4-205ENST00000444415 LINS1Q8NG48 757 aa27.87■■■□□ 2.05
TRAF4-205ENST00000444415 PSMD1Q99460 953 aa27.87■■■□□ 2.05
TRAF4-205ENST00000444415 NMRK2Q9NPI5 230 aa27.87■■■□□ 2.05
TRAF4-205ENST00000444415 H7C1W4 665 aa27.86■■■□□ 2.05
TRAF4-205ENST00000444415 PDE8AO60658 829 aa27.86■■■□□ 2.05
TRAF4-205ENST00000444415 CC2D2BQ6DHV5 1058 aa27.86■■■□□ 2.05
TRAF4-205ENST00000444415 BBOX1O75936 387 aa27.85■■■□□ 2.05
TRAF4-205ENST00000444415 BCL2L13Q9BXK5 485 aa27.85■■■□□ 2.05
TRAF4-205ENST00000444415 SEC31BQ9NQW1 1179 aa27.85■■■□□ 2.05
TRAF4-205ENST00000444415 HNRNPUQ00839 825 aaKnown RBP eCLIP27.83■■■□□ 2.05
TRAF4-205ENST00000444415 UBE3BQ7Z3V4 1068 aa27.83■■■□□ 2.05
TRAF4-205ENST00000444415 SP8Q8IXZ3 490 aa27.83■■■□□ 2.04
TRAF4-205ENST00000444415 IARSP41252 1262 aaKnown RBP27.82■■■□□ 2.04
TRAF4-205ENST00000444415 CCDC85AQ96PX6 553 aaPredicted RBP27.82■■■□□ 2.04
TRAF4-205ENST00000444415 SPEF2Q9C093 1822 aa27.82■■■□□ 2.04
TRAF4-205ENST00000444415 WDR90Q96KV7 1748 aa27.81■■■□□ 2.04
TRAF4-205ENST00000444415 GLTPD2A6NH11 291 aa27.81■■■□□ 2.04
TRAF4-205ENST00000444415 CTSWP56202 376 aa27.81■■■□□ 2.04
TRAF4-205ENST00000444415 ALDH1L2Q3SY69 923 aa27.8■■■□□ 2.04
TRAF4-205ENST00000444415 TTLL11Q8NHH1 800 aa27.8■■■□□ 2.04
TRAF4-205ENST00000444415 PLA2G12BQ9BX93 195 aa27.79■■■□□ 2.04
TRAF4-205ENST00000444415 RTFDC1Q9BY42 306 aaPredicted RBP27.79■■■□□ 2.04
TRAF4-205ENST00000444415 HSP90B1P14625 803 aaKnown RBP27.78■■■□□ 2.04
TRAF4-205ENST00000444415 CCDC152Q4G0S7 254 aa27.78■■■□□ 2.04
TRAF4-205ENST00000444415 GRIPAP1Q4V328 841 aa27.78■■■□□ 2.04
TRAF4-205ENST00000444415 POTECB2RU33 542 aa27.77■■■□□ 2.04
TRAF4-205ENST00000444415 CT47B1P0C2W7 299 aaPredicted RBP27.77■■■□□ 2.04
TRAF4-205ENST00000444415 C1QTNF8P60827 252 aa27.77■■■□□ 2.04
TRAF4-205ENST00000444415 KDM2BQ8NHM5 1336 aa27.77■■■□□ 2.04
TRAF4-205ENST00000444415 ZNF541Q9H0D2 1346 aa27.77■■■□□ 2.04
TRAF4-205ENST00000444415 CEP350Q5VT06 3117 aa27.77■■■□□ 2.04
TRAF4-205ENST00000444415 PTPRCP08575 1304 aa27.77■■■□□ 2.04
TRAF4-205ENST00000444415 RPS8P62241 208 aaKnown RBP27.76■■■□□ 2.04
TRAF4-205ENST00000444415 GREM2Q9H772 168 aa27.76■■■□□ 2.04
TRAF4-205ENST00000444415 RTL9Q8NET4 1388 aa27.76■■■□□ 2.03
TRAF4-205ENST00000444415 SLC4A10Q6U841 1118 aa27.76■■■□□ 2.03
TRAF4-205ENST00000444415 TMC4Q7Z404 712 aa27.76■■■□□ 2.03
TRAF4-205ENST00000444415 RRAGCQ9HB90 399 aa27.76■■■□□ 2.03
TRAF4-205ENST00000444415 SMC4Q9NTJ3 1288 aa27.76■■■□□ 2.03
TRAF4-205ENST00000444415 FZD9O00144 591 aa27.75■■■□□ 2.03
TRAF4-205ENST00000444415 DDNO94850 711 aaPredicted RBP27.74■■■□□ 2.03
TRAF4-205ENST00000444415 DPP8Q6V1X1 898 aaPredicted RBP27.74■■■□□ 2.03
TRAF4-205ENST00000444415 MPNDQ8N594 471 aa27.74■■■□□ 2.03
TRAF4-205ENST00000444415 ALDH1L1O75891 902 aa27.73■■■□□ 2.03
TRAF4-205ENST00000444415 CSF1RP07333 972 aa27.73■■■□□ 2.03
TRAF4-205ENST00000444415 RARSP54136 660 aaKnown RBP27.73■■■□□ 2.03
TRAF4-205ENST00000444415 AOC3Q16853 763 aa27.73■■■□□ 2.03
TRAF4-205ENST00000444415 GRM8O00222 908 aa27.72■■■□□ 2.03
TRAF4-205ENST00000444415 BRPF1P55201 1214 aaPredicted RBP27.72■■■□□ 2.03
TRAF4-205ENST00000444415 GPSM2P81274 684 aa27.72■■■□□ 2.03
TRAF4-205ENST00000444415 FOXO4P98177 505 aa27.72■■■□□ 2.03
TRAF4-205ENST00000444415 EPHA10Q5JZY3 1008 aa27.72■■■□□ 2.03
TRAF4-205ENST00000444415 SRCIN1Q9C0H9 1055 aa27.72■■■□□ 2.03
TRAF4-205ENST00000444415 ZBED9Q6R2W3 1325 aa27.72■■■□□ 2.03
TRAF4-205ENST00000444415 FAM161AQ3B820 660 aa27.71■■■□□ 2.03
TRAF4-205ENST00000444415 LARGE2Q8N3Y3 721 aa27.7■■■□□ 2.03
TRAF4-205ENST00000444415 POLLQ9UGP5 575 aa27.7■■■□□ 2.03
TRAF4-205ENST00000444415 PPIP5K2O43314 1243 aa27.7■■■□□ 2.02
TRAF4-205ENST00000444415 DPY19L2Q6NUT2 758 aa27.7■■■□□ 2.02
TRAF4-205ENST00000444415 KAZALD1Q96I82 304 aa27.7■■■□□ 2.02
TRAF4-205ENST00000444415 TMX4Q9H1E5 349 aaPredicted RBP27.7■■■□□ 2.02
TRAF4-205ENST00000444415 UTYO14607 1347 aa27.69■■■□□ 2.02
TRAF4-205ENST00000444415 KIAA2012Q0VF49 1180 aa27.69■■■□□ 2.02
TRAF4-205ENST00000444415 NSFL1CQ9UNZ2 370 aaKnown RBP27.69■■■□□ 2.02
TRAF4-205ENST00000444415 A0A1B0GUL6 1792 aa27.68■■■□□ 2.02
TRAF4-205ENST00000444415 NBPF7P0C2Y1 421 aaPredicted RBP27.68■■■□□ 2.02
TRAF4-205ENST00000444415 ANKRD18AQ8IVF6 992 aa27.68■■■□□ 2.02
TRAF4-205ENST00000444415 VPS33BQ9H267 617 aa27.68■■■□□ 2.02
TRAF4-205ENST00000444415 NOB1Q9ULX3 412 aaKnown RBP27.68■■■□□ 2.02
TRAF4-205ENST00000444415 SCN4AP35499 1836 aa27.68■■■□□ 2.02
TRAF4-205ENST00000444415 SUPT20HQ8NEM7 779 aa27.67■■■□□ 2.02
TRAF4-205ENST00000444415 L3MBTL3Q96JM7 780 aaPredicted RBP27.67■■■□□ 2.02
TRAF4-205ENST00000444415 GPR101Q96P66 508 aaPredicted RBP27.67■■■□□ 2.02
TRAF4-205ENST00000444415 PODXL2Q9NZ53 605 aa27.67■■■□□ 2.02
TRAF4-205ENST00000444415 TOMM70O94826 608 aa27.66■■■□□ 2.02
TRAF4-205ENST00000444415 ITGA6P23229 1130 aa27.66■■■□□ 2.02
TRAF4-205ENST00000444415 TBC1D16Q8TBP0 767 aa27.66■■■□□ 2.02
TRAF4-205ENST00000444415 JDP2Q8WYK2 163 aa27.66■■■□□ 2.02
TRAF4-205ENST00000444415 CDC5LQ99459 802 aaKnown RBP27.66■■■□□ 2.02
TRAF4-205ENST00000444415 SUCLG2Q96I99 432 aa27.65■■■□□ 2.02
TRAF4-205ENST00000444415 SCN9AQ15858 1988 aa27.65■■■□□ 2.02
TRAF4-205ENST00000444415 WTIPA6NIX2 430 aaPredicted RBP27.64■■■□□ 2.02
TRAF4-205ENST00000444415 VEGFAP15692 232 aaPredicted RBP27.64■■■□□ 2.02
TRAF4-205ENST00000444415 C9orf78Q9NZ63 289 aaPredicted RBP27.64■■■□□ 2.02
TRAF4-205ENST00000444415 NIM1KQ8IY84 436 aa27.64■■■□□ 2.01
TRAF4-205ENST00000444415 BSDC1Q9NW68 430 aaPredicted RBP27.64■■■□□ 2.01
TRAF4-205ENST00000444415 YDJCA8MPS7 323 aa27.63■■■□□ 2.01
TRAF4-205ENST00000444415 BCAR3O75815 825 aa27.63■■■□□ 2.01
TRAF4-205ENST00000444415 LMBR1LQ6UX01 489 aa27.63■■■□□ 2.01
TRAF4-205ENST00000444415 USP44Q9H0E7 712 aa27.63■■■□□ 2.01
TRAF4-205ENST00000444415 MINPP1Q9UNW1 487 aa27.63■■■□□ 2.01
TRAF4-205ENST00000444415 GPC2Q8N158 579 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms