RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 VEGFAP15692 232 aaPredicted RBP28.34■■■□□ 2.13
HDLBP-220ENST00000442730 TMX4Q9H1E5 349 aaPredicted RBP28.34■■■□□ 2.13
HDLBP-220ENST00000442730 POTECB2RU33 542 aa28.33■■■□□ 2.13
HDLBP-220ENST00000442730 NEXNQ0ZGT2 675 aa28.33■■■□□ 2.13
HDLBP-220ENST00000442730 SP8Q8IXZ3 490 aa28.33■■■□□ 2.13
HDLBP-220ENST00000442730 CACNA1FO60840 1977 aa28.33■■■□□ 2.13
HDLBP-220ENST00000442730 DDNO94850 711 aaPredicted RBP28.32■■■□□ 2.12
HDLBP-220ENST00000442730 HSP90B1P14625 803 aaKnown RBP28.32■■■□□ 2.12
HDLBP-220ENST00000442730 HSPA6P17066 643 aa28.32■■■□□ 2.12
HDLBP-220ENST00000442730 FKBP5Q13451 457 aaPredicted RBP28.32■■■□□ 2.12
HDLBP-220ENST00000442730 JARID2Q92833 1246 aaPredicted RBP28.32■■■□□ 2.12
HDLBP-220ENST00000442730 CEP350Q5VT06 3117 aa28.32■■■□□ 2.12
HDLBP-220ENST00000442730 NEURL1BA8MQ27 555 aa28.31■■■□□ 2.12
HDLBP-220ENST00000442730 FZD9O00144 591 aa28.31■■■□□ 2.12
HDLBP-220ENST00000442730 CWF19L2Q2TBE0 894 aaKnown RBP28.31■■■□□ 2.12
HDLBP-220ENST00000442730 TMC4Q7Z404 712 aa28.31■■■□□ 2.12
HDLBP-220ENST00000442730 CELF1Q92879 486 aaKnown RBP28.31■■■□□ 2.12
HDLBP-220ENST00000442730 CDHR2Q9BYE9 1310 aa28.31■■■□□ 2.12
HDLBP-220ENST00000442730 DUOX1Q9NRD9 1551 aa28.31■■■□□ 2.12
HDLBP-220ENST00000442730 RTFDC1Q9BY42 306 aaPredicted RBP28.3■■■□□ 2.12
HDLBP-220ENST00000442730 JDP2Q8WYK2 163 aa28.29■■■□□ 2.12
HDLBP-220ENST00000442730 L3MBTL3Q96JM7 780 aaPredicted RBP28.29■■■□□ 2.12
HDLBP-220ENST00000442730 PDE8AO60658 829 aa28.28■■■□□ 2.12
HDLBP-220ENST00000442730 DPP8Q6V1X1 898 aaPredicted RBP28.28■■■□□ 2.12
HDLBP-220ENST00000442730 LARGE2Q8N3Y3 721 aa28.28■■■□□ 2.12
HDLBP-220ENST00000442730 DNAAF4Q8WXU2 420 aa28.28■■■□□ 2.12
HDLBP-220ENST00000442730 E9PSI1 815 aa28.27■■■□□ 2.12
HDLBP-220ENST00000442730 FSTL1Q12841 308 aa28.27■■■□□ 2.12
HDLBP-220ENST00000442730 DIEXFQ68CQ4 756 aaKnown RBP28.27■■■□□ 2.12
HDLBP-220ENST00000442730 MPNDQ8N594 471 aa28.27■■■□□ 2.12
HDLBP-220ENST00000442730 PPIP5K2O43314 1243 aa28.26■■■□□ 2.11
HDLBP-220ENST00000442730 CCDC152Q4G0S7 254 aa28.26■■■□□ 2.11
HDLBP-220ENST00000442730 SUPT20HQ8NEM7 779 aa28.26■■■□□ 2.11
HDLBP-220ENST00000442730 AOC3Q16853 763 aa28.25■■■□□ 2.11
HDLBP-220ENST00000442730 SMC1BQ8NDV3 1235 aa28.25■■■□□ 2.11
HDLBP-220ENST00000442730 VPS33BQ9H267 617 aa28.25■■■□□ 2.11
HDLBP-220ENST00000442730 SEC31BQ9NQW1 1179 aa28.25■■■□□ 2.11
HDLBP-220ENST00000442730 LTBP1Q14766 1721 aa28.25■■■□□ 2.11
HDLBP-220ENST00000442730 GCKRQ14397 625 aa28.24■■■□□ 2.11
HDLBP-220ENST00000442730 LINS1Q8NG48 757 aa28.24■■■□□ 2.11
HDLBP-220ENST00000442730 CTSWP56202 376 aa28.23■■■□□ 2.11
HDLBP-220ENST00000442730 RPS8P62241 208 aaKnown RBP28.23■■■□□ 2.11
HDLBP-220ENST00000442730 SLFN5Q08AF3 891 aa28.23■■■□□ 2.11
HDLBP-220ENST00000442730 UBE3BQ7Z3V4 1068 aa28.23■■■□□ 2.11
HDLBP-220ENST00000442730 NIM1KQ8IY84 436 aa28.23■■■□□ 2.11
HDLBP-220ENST00000442730 GPC2Q8N158 579 aa28.23■■■□□ 2.11
HDLBP-220ENST00000442730 SCN4AP35499 1836 aa28.22■■■□□ 2.11
HDLBP-220ENST00000442730 IQCA1LA6NCM1 817 aa28.22■■■□□ 2.11
HDLBP-220ENST00000442730 F6X3S4 739 aa28.22■■■□□ 2.11
HDLBP-220ENST00000442730 H7C1W4 665 aa28.22■■■□□ 2.11
HDLBP-220ENST00000442730 CCDC85AQ96PX6 553 aaPredicted RBP28.22■■■□□ 2.11
HDLBP-220ENST00000442730 EIF6P56537 245 aaKnown RBP28.21■■■□□ 2.11
HDLBP-220ENST00000442730 KIAA2012Q0VF49 1180 aa28.21■■■□□ 2.11
HDLBP-220ENST00000442730 CDCA7LQ96GN5 454 aa28.2■■■□□ 2.1
HDLBP-220ENST00000442730 MYH3P11055 1940 aa28.2■■■□□ 2.1
HDLBP-220ENST00000442730 CASP7P55210 303 aa28.19■■■□□ 2.1
HDLBP-220ENST00000442730 GPSM2P81274 684 aa28.19■■■□□ 2.1
HDLBP-220ENST00000442730 TTLL11Q8NHH1 800 aa28.19■■■□□ 2.1
HDLBP-220ENST00000442730 RTL9Q8NET4 1388 aa28.19■■■□□ 2.1
HDLBP-220ENST00000442730 APLP1P51693 650 aa28.18■■■□□ 2.1
HDLBP-220ENST00000442730 BEND3Q5T5X7 828 aa28.18■■■□□ 2.1
HDLBP-220ENST00000442730 TAF1DQ9H5J8 278 aaPredicted RBP28.18■■■□□ 2.1
HDLBP-220ENST00000442730 NSFL1CQ9UNZ2 370 aaKnown RBP28.18■■■□□ 2.1
HDLBP-220ENST00000442730 POTEIP0CG38 1075 aa28.17■■■□□ 2.1
HDLBP-220ENST00000442730 POTEJP0CG39 1038 aa28.17■■■□□ 2.1
HDLBP-220ENST00000442730 PLA2G12BQ9BX93 195 aa28.17■■■□□ 2.1
HDLBP-220ENST00000442730 HACL1Q9UJ83 578 aa28.17■■■□□ 2.1
HDLBP-220ENST00000442730 ZNRF3Q9ULT6 936 aa28.17■■■□□ 2.1
HDLBP-220ENST00000442730 TRMT2AQ8IZ69 625 aaKnown RBP28.16■■■□□ 2.1
HDLBP-220ENST00000442730 MIER1Q8N108 512 aa28.16■■■□□ 2.1
HDLBP-220ENST00000442730 GREM2Q9H772 168 aa28.16■■■□□ 2.1
HDLBP-220ENST00000442730 POLLQ9UGP5 575 aa28.16■■■□□ 2.1
HDLBP-220ENST00000442730 GJA3Q9Y6H8 435 aa28.16■■■□□ 2.1
HDLBP-220ENST00000442730 ANKRD18AQ8IVF6 992 aa28.14■■■□□ 2.1
HDLBP-220ENST00000442730 MRPL50Q8N5N7 158 aaKnown RBP28.14■■■□□ 2.1
HDLBP-220ENST00000442730 CDC5LQ99459 802 aaKnown RBP28.14■■■□□ 2.1
HDLBP-220ENST00000442730 PODXL2Q9NZ53 605 aa28.14■■■□□ 2.1
HDLBP-220ENST00000442730 ADAMTSL1Q8N6G6 1762 aa28.14■■■□□ 2.09
HDLBP-220ENST00000442730 EPHX2P34913 555 aa28.13■■■□□ 2.09
HDLBP-220ENST00000442730 TBC1D16Q8TBP0 767 aa28.13■■■□□ 2.09
HDLBP-220ENST00000442730 C6orf229H3BNL8 230 aa28.12■■■□□ 2.09
HDLBP-220ENST00000442730 SCNN1DP51172 638 aa28.12■■■□□ 2.09
HDLBP-220ENST00000442730 CXCL9Q07325 125 aa28.12■■■□□ 2.09
HDLBP-220ENST00000442730 WASHC4Q2M389 1173 aa28.12■■■□□ 2.09
HDLBP-220ENST00000442730 CHADLQ6NUI6 762 aa28.12■■■□□ 2.09
HDLBP-220ENST00000442730 SSH1Q8WYL5 1049 aa28.12■■■□□ 2.09
HDLBP-220ENST00000442730 LDHDQ86WU2 507 aa28.11■■■□□ 2.09
HDLBP-220ENST00000442730 SPEF2Q9C093 1822 aa28.11■■■□□ 2.09
HDLBP-220ENST00000442730 YDJCA8MPS7 323 aa28.1■■■□□ 2.09
HDLBP-220ENST00000442730 FAM161AQ3B820 660 aa28.1■■■□□ 2.09
HDLBP-220ENST00000442730 GPR101Q96P66 508 aaPredicted RBP28.1■■■□□ 2.09
HDLBP-220ENST00000442730 ANKIB1Q9P2G1 1089 aa28.1■■■□□ 2.09
HDLBP-220ENST00000442730 UFL1O94874 794 aa28.09■■■□□ 2.09
HDLBP-220ENST00000442730 CSF1RP07333 972 aa28.09■■■□□ 2.09
HDLBP-220ENST00000442730 EAPPQ56P03 285 aaPredicted RBP28.09■■■□□ 2.09
HDLBP-220ENST00000442730 EYA3Q99504 573 aa28.09■■■□□ 2.09
HDLBP-220ENST00000442730 GRM8O00222 908 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 RIMBP2O15034 1052 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 ALDH1L1O75891 902 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 LMOD1P29536 600 aaPredicted RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms