RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 TMC4Q7Z404 712 aa18.61■□□□□ 0.57
PTPRN-206ENST00000442029 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
PTPRN-206ENST00000442029 MPNDQ8N594 471 aa18.61■□□□□ 0.57
PTPRN-206ENST00000442029 MYD88Q99836 296 aa18.61■□□□□ 0.57
PTPRN-206ENST00000442029 STK31Q9BXU1 1019 aa18.61■□□□□ 0.57
PTPRN-206ENST00000442029 VPS33BQ9H267 617 aa18.61■□□□□ 0.57
PTPRN-206ENST00000442029 EPHX2P34913 555 aa18.6■□□□□ 0.57
PTPRN-206ENST00000442029 TRIM28Q13263 835 aaKnown RBP18.6■□□□□ 0.57
PTPRN-206ENST00000442029 AOC3Q16853 763 aa18.6■□□□□ 0.57
PTPRN-206ENST00000442029 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
PTPRN-206ENST00000442029 CLEC11AQ9Y240 323 aa18.6■□□□□ 0.57
PTPRN-206ENST00000442029 IRS4O14654 1257 aaPredicted RBP18.59■□□□□ 0.57
PTPRN-206ENST00000442029 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
PTPRN-206ENST00000442029 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
PTPRN-206ENST00000442029 PNMA8AQ86V59 439 aaPredicted RBP18.59■□□□□ 0.57
PTPRN-206ENST00000442029 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
PTPRN-206ENST00000442029 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
PTPRN-206ENST00000442029 IL16Q14005 1332 aa18.58■□□□□ 0.57
PTPRN-206ENST00000442029 SF3B3Q15393 1217 aaKnown RBP18.58■□□□□ 0.56
PTPRN-206ENST00000442029 TWISTNBQ3B726 338 aaPredicted RBP18.58■□□□□ 0.56
PTPRN-206ENST00000442029 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
PTPRN-206ENST00000442029 ZBTB38Q8NAP3 1195 aaPredicted RBP18.58■□□□□ 0.56
PTPRN-206ENST00000442029 ADAMTSL1Q8N6G6 1762 aa18.58■□□□□ 0.56
PTPRN-206ENST00000442029 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
PTPRN-206ENST00000442029 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
PTPRN-206ENST00000442029 RTFDC1Q9BY42 306 aaPredicted RBP18.57■□□□□ 0.56
PTPRN-206ENST00000442029 CWC25Q9NXE8 425 aaPredicted RBP18.57■□□□□ 0.56
PTPRN-206ENST00000442029 SPEF2Q9C093 1822 aa18.57■□□□□ 0.56
PTPRN-206ENST00000442029 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
PTPRN-206ENST00000442029 MAP3K2Q9Y2U5 619 aa18.56■□□□□ 0.56
PTPRN-206ENST00000442029 LTBP1Q14766 1721 aa18.56■□□□□ 0.56
PTPRN-206ENST00000442029 TRPM7Q96QT4 1865 aa18.55■□□□□ 0.56
PTPRN-206ENST00000442029 CELF1Q92879 486 aaKnown RBP18.55■□□□□ 0.56
PTPRN-206ENST00000442029 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
PTPRN-206ENST00000442029 PCCAP05165 728 aaPredicted RBP18.54■□□□□ 0.56
PTPRN-206ENST00000442029 KIAA2012Q0VF49 1180 aa18.54■□□□□ 0.56
PTPRN-206ENST00000442029 KSR2Q6VAB6 950 aa18.54■□□□□ 0.56
PTPRN-206ENST00000442029 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
PTPRN-206ENST00000442029 NSFL1CQ9UNZ2 370 aaKnown RBP18.54■□□□□ 0.56
PTPRN-206ENST00000442029 PI4KAP2A4QPH2 592 aa18.53■□□□□ 0.56
PTPRN-206ENST00000442029 CCDC152Q4G0S7 254 aa18.53■□□□□ 0.56
PTPRN-206ENST00000442029 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
PTPRN-206ENST00000442029 PI4KAP1Q8N8J0 262 aa18.53■□□□□ 0.56
PTPRN-206ENST00000442029 DUOX1Q9NRD9 1551 aa18.53■□□□□ 0.56
PTPRN-206ENST00000442029 CREBZFQ9NS37 354 aa18.53■□□□□ 0.56
PTPRN-206ENST00000442029 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
PTPRN-206ENST00000442029 PDE8AO60658 829 aa18.52■□□□□ 0.56
PTPRN-206ENST00000442029 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
PTPRN-206ENST00000442029 RPS8P62241 208 aaKnown RBP18.52■□□□□ 0.56
PTPRN-206ENST00000442029 JMYQ8N9B5 988 aa18.52■□□□□ 0.56
PTPRN-206ENST00000442029 COL4A1P02462 1669 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 C6orf229H3BNL8 230 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 SCNN1DP51172 638 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 CXCL9Q07325 125 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 TNIP1Q15025 636 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 WASHC4Q2M389 1173 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 CIAPIN1Q6FI81 312 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 JARID2Q92833 1246 aaPredicted RBP18.51■□□□□ 0.55
PTPRN-206ENST00000442029 EYA3Q99504 573 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 BCL2L13Q9BXK5 485 aa18.51■□□□□ 0.55
PTPRN-206ENST00000442029 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
PTPRN-206ENST00000442029 EPS15P42566 896 aa18.5■□□□□ 0.55
PTPRN-206ENST00000442029 MAP1SQ66K74 1059 aaPredicted RBP18.5■□□□□ 0.55
PTPRN-206ENST00000442029 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
PTPRN-206ENST00000442029 CCDC85AQ96PX6 553 aaPredicted RBP18.5■□□□□ 0.55
PTPRN-206ENST00000442029 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
PTPRN-206ENST00000442029 RIMBP2O15034 1052 aa18.49■□□□□ 0.55
PTPRN-206ENST00000442029 RAD17O75943 681 aa18.49■□□□□ 0.55
PTPRN-206ENST00000442029 GPSM2P81274 684 aa18.49■□□□□ 0.55
PTPRN-206ENST00000442029 USP50Q70EL3 339 aaPredicted RBP18.49■□□□□ 0.55
PTPRN-206ENST00000442029 SEC31BQ9NQW1 1179 aa18.49■□□□□ 0.55
PTPRN-206ENST00000442029 TMEM88BA6NKF7 163 aa18.48■□□□□ 0.55
PTPRN-206ENST00000442029 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
PTPRN-206ENST00000442029 FLIIQ13045 1269 aa18.48■□□□□ 0.55
PTPRN-206ENST00000442029 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
PTPRN-206ENST00000442029 G2E3Q7L622 706 aa18.48■□□□□ 0.55
PTPRN-206ENST00000442029 MYH16Q9H6N6 1097 aa18.48■□□□□ 0.55
PTPRN-206ENST00000442029 ADARB2Q9NS39 739 aaKnown RBP18.48■□□□□ 0.55
PTPRN-206ENST00000442029 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
PTPRN-206ENST00000442029 ANKIB1Q9P2G1 1089 aa18.48■□□□□ 0.55
PTPRN-206ENST00000442029 MKRN1Q9UHC7 482 aaKnown RBP18.48■□□□□ 0.55
PTPRN-206ENST00000442029 G3V3G9 751 aa18.47■□□□□ 0.55
PTPRN-206ENST00000442029 IGKV5-2P06315 115 aa18.47■□□□□ 0.55
PTPRN-206ENST00000442029 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
PTPRN-206ENST00000442029 EXOSC9Q06265 439 aaKnown RBP18.47■□□□□ 0.55
PTPRN-206ENST00000442029 CWF19L2Q2TBE0 894 aaKnown RBP18.47■□□□□ 0.55
PTPRN-206ENST00000442029 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
PTPRN-206ENST00000442029 ANKRD18AQ8IVF6 992 aa18.47■□□□□ 0.55
PTPRN-206ENST00000442029 POLR2AP24928 1970 aaKnown RBP18.47■□□□□ 0.55
PTPRN-206ENST00000442029 PSME4Q14997 1843 aa18.46■□□□□ 0.55
PTPRN-206ENST00000442029 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
PTPRN-206ENST00000442029 CTSWP56202 376 aa18.46■□□□□ 0.55
PTPRN-206ENST00000442029 CDC5LQ99459 802 aaKnown RBP18.46■□□□□ 0.55
PTPRN-206ENST00000442029 DBNDD1Q9H9R9 158 aa18.46■□□□□ 0.55
PTPRN-206ENST00000442029 POLLQ9UGP5 575 aa18.46■□□□□ 0.55
PTPRN-206ENST00000442029 SCN9AQ15858 1988 aa18.46■□□□□ 0.55
PTPRN-206ENST00000442029 VAMP4O75379 141 aa18.45■□□□□ 0.54
PTPRN-206ENST00000442029 UFL1O94874 794 aa18.45■□□□□ 0.54
PTPRN-206ENST00000442029 TBC1D16Q8TBP0 767 aa18.45■□□□□ 0.54
PTPRN-206ENST00000442029 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms