RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
HDAC9-215ENST00000441986 ZNF496Q96IT1 587 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-215ENST00000441986 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
HDAC9-215ENST00000441986 WBP1LQ9NX94 342 aa8.29□□□□□ -1.08
HDAC9-215ENST00000441986 HACL1Q9UJ83 578 aa8.29□□□□□ -1.08
HDAC9-215ENST00000441986 CARMIL3Q8ND23 1372 aa8.29□□□□□ -1.08
HDAC9-215ENST00000441986 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
HDAC9-215ENST00000441986 MAP3K7O43318 606 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 A1BGP04217 495 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 HSPA5P11021 654 aaKnown RBP8.28□□□□□ -1.08
HDAC9-215ENST00000441986 NPR1P16066 1061 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 ALDH1B1P30837 517 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 LBX1P52954 281 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 DOK7Q18PE1 504 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 NBPF5PQ86XG9 351 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-215ENST00000441986 CNTROBQ8N137 903 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 IL17REQ8NFR9 667 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 GAS2L2Q8NHY3 880 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 C7orf43Q8WVR3 580 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 NPDC1Q9NQX5 325 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-215ENST00000441986 TJP1Q07157 1748 aa8.28□□□□□ -1.08
HDAC9-215ENST00000441986 ADAMTS7Q9UKP4 1686 aa8.27□□□□□ -1.08
HDAC9-215ENST00000441986 HEG1Q9ULI3 1381 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 NRXN2Q9P2S2 1712 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 BTBD11A6QL63 1104 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 CAMTA2O94983 1202 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-215ENST00000441986 EPHX2P34913 555 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 FOSBP53539 338 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
HDAC9-215ENST00000441986 DZIP3Q86Y13 1208 aaKnown RBP8.27□□□□□ -1.09
HDAC9-215ENST00000441986 CDHR5Q9HBB8 845 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 ZSWIM6Q9HCJ5 1215 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 ZNF652Q9Y2D9 606 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 CLSPNQ9HAW4 1339 aa8.27□□□□□ -1.09
HDAC9-215ENST00000441986 SCN11AQ9UI33 1791 aa8.26□□□□□ -1.09
HDAC9-215ENST00000441986 KLRG2A4D1S0 409 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-215ENST00000441986 RASSF10A6NK89 507 aa8.26□□□□□ -1.09
HDAC9-215ENST00000441986 GPC2Q8N158 579 aa8.26□□□□□ -1.09
HDAC9-215ENST00000441986 JDP2Q8WYK2 163 aa8.26□□□□□ -1.09
HDAC9-215ENST00000441986 BEGAINQ9BUH8 593 aa8.26□□□□□ -1.09
HDAC9-215ENST00000441986 AFDNP55196 1824 aaKnown RBP8.26□□□□□ -1.09
HDAC9-215ENST00000441986 WDR33Q9C0J8 1336 aaKnown RBP8.26□□□□□ -1.09
HDAC9-215ENST00000441986 FZD9O00144 591 aa8.25□□□□□ -1.09
HDAC9-215ENST00000441986 U2SURPO15042 1029 aaKnown RBP8.25□□□□□ -1.09
HDAC9-215ENST00000441986 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-215ENST00000441986 GRIPAP1Q4V328 841 aa8.25□□□□□ -1.09
HDAC9-215ENST00000441986 MAMSTRQ6ZN01 415 aa8.25□□□□□ -1.09
HDAC9-215ENST00000441986 SYNE4Q8N205 404 aa8.25□□□□□ -1.09
HDAC9-215ENST00000441986 FAM163AQ96GL9 167 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-215ENST00000441986 ABHD8Q96I13 439 aa8.25□□□□□ -1.09
HDAC9-215ENST00000441986 SCUBE2Q9NQ36 999 aa8.25□□□□□ -1.09
HDAC9-215ENST00000441986 ZNF277Q9NRM2 450 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-215ENST00000441986 ABT1Q9ULW3 272 aaKnown RBP8.25□□□□□ -1.09
HDAC9-215ENST00000441986 USP16Q9Y5T5 823 aa8.25□□□□□ -1.09
HDAC9-215ENST00000441986 RIMBP2O15034 1052 aa8.24□□□□□ -1.09
HDAC9-215ENST00000441986 SNRPA1P09661 255 aaKnown RBP8.24□□□□□ -1.09
HDAC9-215ENST00000441986 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
HDAC9-215ENST00000441986 ECE1P42892 770 aa8.24□□□□□ -1.09
HDAC9-215ENST00000441986 EIF6P56537 245 aaKnown RBP8.24□□□□□ -1.09
HDAC9-215ENST00000441986 TSR1Q2NL82 804 aaKnown RBP8.24□□□□□ -1.09
HDAC9-215ENST00000441986 MAP1SQ66K74 1059 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-215ENST00000441986 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
HDAC9-215ENST00000441986 PARP9Q8IXQ6 854 aa8.24□□□□□ -1.09
HDAC9-215ENST00000441986 PCGF6Q9BYE7 350 aa8.24□□□□□ -1.09
HDAC9-215ENST00000441986 DDX21Q9NR30 783 aaKnown RBP eCLIP8.24□□□□□ -1.09
HDAC9-215ENST00000441986 NIP7Q9Y221 180 aaKnown RBP eCLIP8.24□□□□□ -1.09
HDAC9-215ENST00000441986 MRC1P22897 1456 aa8.24□□□□□ -1.09
HDAC9-215ENST00000441986 CCDC88AQ3V6T2 1871 aa8.23□□□□□ -1.09
HDAC9-215ENST00000441986 DLEC1Q9Y238 1755 aa8.23□□□□□ -1.09
HDAC9-215ENST00000441986 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-215ENST00000441986 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
HDAC9-215ENST00000441986 LMOD1P29536 600 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-215ENST00000441986 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-215ENST00000441986 CC2D1BQ5T0F9 858 aaKnown RBP8.23□□□□□ -1.09
HDAC9-215ENST00000441986 IL27Q8NEV9 243 aa8.23□□□□□ -1.09
HDAC9-215ENST00000441986 RTF1Q92541 710 aaKnown RBP8.23□□□□□ -1.09
HDAC9-215ENST00000441986 GPR101Q96P66 508 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-215ENST00000441986 PSMD1Q99460 953 aa8.23□□□□□ -1.09
HDAC9-215ENST00000441986 TIAM2Q8IVF5 1701 aa8.23□□□□□ -1.09
HDAC9-215ENST00000441986 FER1L6Q2WGJ9 1857 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 CCDC85CA6NKD9 419 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 KCNQ3O43525 872 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 NUDT7P0C024 238 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 RGS19P49795 217 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 ARSIQ5FYB1 569 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 USP50Q70EL3 339 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-215ENST00000441986 ZDHHC16Q969W1 377 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 NYXQ9GZU5 481 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 TMX4Q9H1E5 349 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-215ENST00000441986 GJA3Q9Y6H8 435 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 RNF123Q5XPI4 1314 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
HDAC9-215ENST00000441986 DICER1Q9UPY3 1922 aaKnown RBP8.21□□□□□ -1.09
HDAC9-215ENST00000441986 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
HDAC9-215ENST00000441986 MAP2K2P36507 400 aa8.21□□□□□ -1.1
HDAC9-215ENST00000441986 OLFM4Q6UX06 510 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms