RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 CCDC191Q8NCU4 936 aa20.1■□□□□ 0.81
UBE2F-214ENST00000440223 CWC25Q9NXE8 425 aaPredicted RBP20.09■□□□□ 0.81
UBE2F-214ENST00000440223 FER1L6Q2WGJ9 1857 aa20.09■□□□□ 0.81
UBE2F-214ENST00000440223 GNAI3P08754 354 aa20.08■□□□□ 0.81
UBE2F-214ENST00000440223 HSP90B1P14625 803 aaKnown RBP20.08■□□□□ 0.81
UBE2F-214ENST00000440223 RBM17Q96I25 401 aaKnown RBP20.08■□□□□ 0.81
UBE2F-214ENST00000440223 SBF1O95248 1867 aa20.07■□□□□ 0.8
UBE2F-214ENST00000440223 ZBTB7BO15156 539 aaPredicted RBP20.07■□□□□ 0.8
UBE2F-214ENST00000440223 C21orf2O43822 256 aa20.07■□□□□ 0.8
UBE2F-214ENST00000440223 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
UBE2F-214ENST00000440223 ZBTB38Q8NAP3 1195 aaPredicted RBP20.07■□□□□ 0.8
UBE2F-214ENST00000440223 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
UBE2F-214ENST00000440223 ZBTB40Q9NUA8 1239 aa20.07■□□□□ 0.8
UBE2F-214ENST00000440223 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
UBE2F-214ENST00000440223 HDAC5Q9UQL6 1122 aa20.07■□□□□ 0.8
UBE2F-214ENST00000440223 HCLS1P14317 486 aaPredicted RBP20.06■□□□□ 0.8
UBE2F-214ENST00000440223 HOXA10P31260 410 aaPredicted RBP20.06■□□□□ 0.8
UBE2F-214ENST00000440223 PCCAP05165 728 aaPredicted RBP20.05■□□□□ 0.8
UBE2F-214ENST00000440223 C3orf67Q6ZVT6 689 aa20.05■□□□□ 0.8
UBE2F-214ENST00000440223 SYNE4Q8N205 404 aa20.05■□□□□ 0.8
UBE2F-214ENST00000440223 LINS1Q8NG48 757 aa20.05■□□□□ 0.8
UBE2F-214ENST00000440223 CRAMP1Q96RY5 1269 aa20.05■□□□□ 0.8
UBE2F-214ENST00000440223 IRS4O14654 1257 aaPredicted RBP20.04■□□□□ 0.8
UBE2F-214ENST00000440223 CCDC93Q567U6 631 aa20.04■□□□□ 0.8
UBE2F-214ENST00000440223 BEND3Q5T5X7 828 aa20.04■□□□□ 0.8
UBE2F-214ENST00000440223 RWDD1Q9H446 243 aaPredicted RBP20.04■□□□□ 0.8
UBE2F-214ENST00000440223 CCDC88AQ3V6T2 1871 aa20.04■□□□□ 0.8
UBE2F-214ENST00000440223 NEURL1BA8MQ27 555 aa20.03■□□□□ 0.8
UBE2F-214ENST00000440223 IGKV5-2P06315 115 aa20.03■□□□□ 0.8
UBE2F-214ENST00000440223 RASSF7Q02833 373 aa20.03■□□□□ 0.8
UBE2F-214ENST00000440223 RTL5Q5HYW3 569 aaPredicted RBP20.03■□□□□ 0.8
UBE2F-214ENST00000440223 CENPQQ7L2Z9 268 aaPredicted RBP20.03■□□□□ 0.8
UBE2F-214ENST00000440223 MYH3P11055 1940 aa20.03■□□□□ 0.8
UBE2F-214ENST00000440223 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.8
UBE2F-214ENST00000440223 PPEF1O14829 653 aaPredicted RBP20.02■□□□□ 0.8
UBE2F-214ENST00000440223 UBTFL1P0CB47 393 aaPredicted RBP20.02■□□□□ 0.8
UBE2F-214ENST00000440223 CWF19L2Q2TBE0 894 aaKnown RBP20.02■□□□□ 0.8
UBE2F-214ENST00000440223 C9orf131Q5VYM1 1079 aa20.02■□□□□ 0.8
UBE2F-214ENST00000440223 DDX46Q7L014 1031 aaKnown RBP20.02■□□□□ 0.8
UBE2F-214ENST00000440223 RNF181Q9P0P0 153 aa20.02■□□□□ 0.8
UBE2F-214ENST00000440223 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
UBE2F-214ENST00000440223 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.79
UBE2F-214ENST00000440223 NFKBIEO00221 500 aa20.01■□□□□ 0.79
UBE2F-214ENST00000440223 GNAI2P04899 355 aa20.01■□□□□ 0.79
UBE2F-214ENST00000440223 LMNB1P20700 586 aa20.01■□□□□ 0.79
UBE2F-214ENST00000440223 ZNF784Q8NCA9 323 aaPredicted RBP20.01■□□□□ 0.79
UBE2F-214ENST00000440223 C7orf43Q8WVR3 580 aa20.01■□□□□ 0.79
UBE2F-214ENST00000440223 MEIS3Q99687 375 aa20.01■□□□□ 0.79
UBE2F-214ENST00000440223 TMX4Q9H1E5 349 aaPredicted RBP20.01■□□□□ 0.79
UBE2F-214ENST00000440223 TAOK3Q9H2K8 898 aa20.01■□□□□ 0.79
UBE2F-214ENST00000440223 C9orf78Q9NZ63 289 aaPredicted RBP20.01■□□□□ 0.79
UBE2F-214ENST00000440223 DICER1Q9UPY3 1922 aaKnown RBP20.01■□□□□ 0.79
UBE2F-214ENST00000440223 SF3B3Q15393 1217 aaKnown RBP20■□□□□ 0.79
UBE2F-214ENST00000440223 CC2D2BQ6DHV5 1058 aa20■□□□□ 0.79
UBE2F-214ENST00000440223 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
UBE2F-214ENST00000440223 PDE8AO60658 829 aa19.99■□□□□ 0.79
UBE2F-214ENST00000440223 GCKRQ14397 625 aa19.99■□□□□ 0.79
UBE2F-214ENST00000440223 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
UBE2F-214ENST00000440223 PCDHB15Q9Y5E8 787 aa19.99■□□□□ 0.79
UBE2F-214ENST00000440223 ZC3H4Q9UPT8 1303 aaKnown RBP19.99■□□□□ 0.79
UBE2F-214ENST00000440223 HMMRO75330 724 aa19.98■□□□□ 0.79
UBE2F-214ENST00000440223 HDAC1Q13547 482 aaPredicted RBP19.98■□□□□ 0.79
UBE2F-214ENST00000440223 GRAPQ13588 217 aa19.98■□□□□ 0.79
UBE2F-214ENST00000440223 RPAP2Q8IXW5 612 aaPredicted RBP19.98■□□□□ 0.79
UBE2F-214ENST00000440223 GRAPLQ8TC17 118 aaPredicted RBP19.98■□□□□ 0.79
UBE2F-214ENST00000440223 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
UBE2F-214ENST00000440223 TAF1P21675 1872 aa19.98■□□□□ 0.79
UBE2F-214ENST00000440223 BBOX1O75936 387 aa19.97■□□□□ 0.79
UBE2F-214ENST00000440223 FKBP4Q02790 459 aaKnown RBP eCLIP19.97■□□□□ 0.79
UBE2F-214ENST00000440223 CCDC152Q4G0S7 254 aa19.97■□□□□ 0.79
UBE2F-214ENST00000440223 TMC4Q7Z404 712 aa19.97■□□□□ 0.79
UBE2F-214ENST00000440223 LRRC37AA6NMS7 1700 aa19.96■□□□□ 0.79
UBE2F-214ENST00000440223 GRM8O00222 908 aa19.96■□□□□ 0.79
UBE2F-214ENST00000440223 UBE3BQ7Z3V4 1068 aa19.96■□□□□ 0.79
UBE2F-214ENST00000440223 JARID2Q92833 1246 aaPredicted RBP19.96■□□□□ 0.79
UBE2F-214ENST00000440223 USP44Q9H0E7 712 aa19.96■□□□□ 0.79
UBE2F-214ENST00000440223 KDM2BQ8NHM5 1336 aa19.96■□□□□ 0.79
UBE2F-214ENST00000440223 SNED1Q8TER0 1413 aa19.95■□□□□ 0.78
UBE2F-214ENST00000440223 H7C1W4 665 aa19.95■□□□□ 0.78
UBE2F-214ENST00000440223 OLFM4Q6UX06 510 aa19.95■□□□□ 0.78
UBE2F-214ENST00000440223 ATP6V0A2Q9Y487 856 aa19.95■□□□□ 0.78
UBE2F-214ENST00000440223 CTSWP56202 376 aa19.94■□□□□ 0.78
UBE2F-214ENST00000440223 ANKRD44Q8N8A2 993 aa19.94■□□□□ 0.78
UBE2F-214ENST00000440223 PSMD1Q99460 953 aa19.94■□□□□ 0.78
UBE2F-214ENST00000440223 GPBP1L1Q9HC44 474 aaPredicted RBP19.94■□□□□ 0.78
UBE2F-214ENST00000440223 PRELPP51888 382 aa19.93■□□□□ 0.78
UBE2F-214ENST00000440223 LRRFIP2Q9Y608 721 aaKnown RBP19.93■□□□□ 0.78
UBE2F-214ENST00000440223 UTYO14607 1347 aa19.93■□□□□ 0.78
UBE2F-214ENST00000440223 CEP85Q6P2H3 762 aa19.92■□□□□ 0.78
UBE2F-214ENST00000440223 SP8Q8IXZ3 490 aa19.92■□□□□ 0.78
UBE2F-214ENST00000440223 ZNF526Q8TF50 670 aaPredicted RBP19.92■□□□□ 0.78
UBE2F-214ENST00000440223 PLA2G12BQ9BX93 195 aa19.92■□□□□ 0.78
UBE2F-214ENST00000440223 SPEF2Q9C093 1822 aa19.91■□□□□ 0.78
UBE2F-214ENST00000440223 CELF1Q92879 486 aaKnown RBP19.91■□□□□ 0.78
UBE2F-214ENST00000440223 IGHDP01880 384 aa19.9■□□□□ 0.78
UBE2F-214ENST00000440223 NBPF7P0C2Y1 421 aaPredicted RBP19.9■□□□□ 0.78
UBE2F-214ENST00000440223 CASP7P55210 303 aa19.9■□□□□ 0.78
UBE2F-214ENST00000440223 SUPT20HQ8NEM7 779 aa19.9■□□□□ 0.78
UBE2F-214ENST00000440223 GCC1Q96CN9 775 aa19.9■□□□□ 0.78
UBE2F-214ENST00000440223 CDC5LQ99459 802 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms