RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
HLA-W-207ENST00000439514 ALDH1L2Q3SY69 923 aa16.7■□□□□ 0.26
HLA-W-207ENST00000439514 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
HLA-W-207ENST00000439514 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
HLA-W-207ENST00000439514 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
HLA-W-207ENST00000439514 PTPRCP08575 1304 aa16.7■□□□□ 0.26
HLA-W-207ENST00000439514 CCDC88AQ3V6T2 1871 aa16.69■□□□□ 0.26
HLA-W-207ENST00000439514 GCKRQ14397 625 aa16.68■□□□□ 0.26
HLA-W-207ENST00000439514 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
HLA-W-207ENST00000439514 DPP8Q6V1X1 898 aaPredicted RBP16.68■□□□□ 0.26
HLA-W-207ENST00000439514 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
HLA-W-207ENST00000439514 RTL9Q8NET4 1388 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 H7C1W4 665 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 KIF3CO14782 793 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 TOMM70O94826 608 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 VEGFAP15692 232 aaPredicted RBP16.67■□□□□ 0.26
HLA-W-207ENST00000439514 PRELPP51888 382 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
HLA-W-207ENST00000439514 MPNDQ8N594 471 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
HLA-W-207ENST00000439514 PLA2G12BQ9BX93 195 aa16.67■□□□□ 0.26
HLA-W-207ENST00000439514 RTFDC1Q9BY42 306 aaPredicted RBP16.67■□□□□ 0.26
HLA-W-207ENST00000439514 ZNF277Q9NRM2 450 aaPredicted RBP16.67■□□□□ 0.26
HLA-W-207ENST00000439514 CTSWP56202 376 aa16.66■□□□□ 0.26
HLA-W-207ENST00000439514 CWF19L2Q2TBE0 894 aaKnown RBP16.66■□□□□ 0.26
HLA-W-207ENST00000439514 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
HLA-W-207ENST00000439514 EIF6P56537 245 aaKnown RBP16.65■□□□□ 0.26
HLA-W-207ENST00000439514 UBE3BQ7Z3V4 1068 aa16.65■□□□□ 0.26
HLA-W-207ENST00000439514 NIM1KQ8IY84 436 aa16.65■□□□□ 0.26
HLA-W-207ENST00000439514 LARGE2Q8N3Y3 721 aa16.65■□□□□ 0.26
HLA-W-207ENST00000439514 NMRK2Q9NPI5 230 aa16.65■□□□□ 0.26
HLA-W-207ENST00000439514 FZD9O00144 591 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 BEND3Q5T5X7 828 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 OLFM4Q6UX06 510 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 MRPL50Q8N5N7 158 aaKnown RBP16.64■□□□□ 0.25
HLA-W-207ENST00000439514 RBM46Q8TBY0 533 aaKnown RBP16.64■□□□□ 0.25
HLA-W-207ENST00000439514 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 EYA3Q99504 573 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 LRRC37AA6NMS7 1700 aa16.64■□□□□ 0.25
HLA-W-207ENST00000439514 MYH3P11055 1940 aa16.63■□□□□ 0.25
HLA-W-207ENST00000439514 WDR90Q96KV7 1748 aa16.63■□□□□ 0.25
HLA-W-207ENST00000439514 PPIP5K2O43314 1243 aa16.63■□□□□ 0.25
HLA-W-207ENST00000439514 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
HLA-W-207ENST00000439514 RRAGCQ9HB90 399 aa16.63■□□□□ 0.25
HLA-W-207ENST00000439514 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
HLA-W-207ENST00000439514 F6X3S4 739 aa16.62■□□□□ 0.25
HLA-W-207ENST00000439514 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
HLA-W-207ENST00000439514 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
HLA-W-207ENST00000439514 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
HLA-W-207ENST00000439514 FSTL1Q12841 308 aa16.62■□□□□ 0.25
HLA-W-207ENST00000439514 GPC2Q8N158 579 aa16.62■□□□□ 0.25
HLA-W-207ENST00000439514 TTLL11Q8NHH1 800 aa16.62■□□□□ 0.25
HLA-W-207ENST00000439514 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
HLA-W-207ENST00000439514 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
HLA-W-207ENST00000439514 C9orf78Q9NZ63 289 aaPredicted RBP16.62■□□□□ 0.25
HLA-W-207ENST00000439514 GRM8O00222 908 aa16.61■□□□□ 0.25
HLA-W-207ENST00000439514 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
HLA-W-207ENST00000439514 PODXL2Q9NZ53 605 aa16.61■□□□□ 0.25
HLA-W-207ENST00000439514 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
HLA-W-207ENST00000439514 IGHMBP2P38935 993 aaKnown RBP16.6■□□□□ 0.25
HLA-W-207ENST00000439514 CASP7P55210 303 aa16.6■□□□□ 0.25
HLA-W-207ENST00000439514 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
HLA-W-207ENST00000439514 ZNRF3Q9ULT6 936 aa16.6■□□□□ 0.25
HLA-W-207ENST00000439514 KIF16BQ96L93 1317 aa16.6■□□□□ 0.25
HLA-W-207ENST00000439514 CSF1RP07333 972 aa16.59■□□□□ 0.25
HLA-W-207ENST00000439514 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
HLA-W-207ENST00000439514 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
HLA-W-207ENST00000439514 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
HLA-W-207ENST00000439514 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
HLA-W-207ENST00000439514 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
HLA-W-207ENST00000439514 ANKIB1Q9P2G1 1089 aa16.59■□□□□ 0.25
HLA-W-207ENST00000439514 HDAC5Q9UQL6 1122 aa16.59■□□□□ 0.25
HLA-W-207ENST00000439514 XDHP47989 1333 aa16.59■□□□□ 0.25
HLA-W-207ENST00000439514 SCN4AP35499 1836 aa16.59■□□□□ 0.25
HLA-W-207ENST00000439514 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
HLA-W-207ENST00000439514 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
HLA-W-207ENST00000439514 LMOD1P29536 600 aaPredicted RBP16.58■□□□□ 0.24
HLA-W-207ENST00000439514 AOC3Q16853 763 aa16.58■□□□□ 0.24
HLA-W-207ENST00000439514 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.24
HLA-W-207ENST00000439514 GREM2Q9H772 168 aa16.58■□□□□ 0.24
HLA-W-207ENST00000439514 GGA1Q9UJY5 639 aa16.58■□□□□ 0.24
HLA-W-207ENST00000439514 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
HLA-W-207ENST00000439514 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
HLA-W-207ENST00000439514 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
HLA-W-207ENST00000439514 ATP2B4P23634 1241 aa16.57■□□□□ 0.24
HLA-W-207ENST00000439514 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
HLA-W-207ENST00000439514 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
HLA-W-207ENST00000439514 TNIP1Q15025 636 aa16.57■□□□□ 0.24
HLA-W-207ENST00000439514 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
HLA-W-207ENST00000439514 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
HLA-W-207ENST00000439514 ZC3H12CQ9C0D7 883 aaKnown RBP16.57■□□□□ 0.24
HLA-W-207ENST00000439514 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
HLA-W-207ENST00000439514 UTYO14607 1347 aa16.56■□□□□ 0.24
HLA-W-207ENST00000439514 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
HLA-W-207ENST00000439514 HSPA6P17066 643 aa16.56■□□□□ 0.24
HLA-W-207ENST00000439514 ITGA6P23229 1130 aa16.56■□□□□ 0.24
HLA-W-207ENST00000439514 GPSM2P81274 684 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms