RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 DEAF1O75398 565 aaPredicted RBP8.62□□□□□ -1.03
CHEK2-217ENST00000439346 ELMSAN1Q6PJG2 1045 aa8.62□□□□□ -1.03
CHEK2-217ENST00000439346 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
CHEK2-217ENST00000439346 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
CHEK2-217ENST00000439346 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
CHEK2-217ENST00000439346 ALX3O95076 343 aa8.61□□□□□ -1.03
CHEK2-217ENST00000439346 RARAP10276 462 aa8.61□□□□□ -1.03
CHEK2-217ENST00000439346 FLIIQ13045 1269 aa8.61□□□□□ -1.03
CHEK2-217ENST00000439346 KANK4Q5T7N3 995 aaPredicted RBP8.61□□□□□ -1.03
CHEK2-217ENST00000439346 WFDC8Q8IUA0 241 aa8.61□□□□□ -1.03
CHEK2-217ENST00000439346 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
CHEK2-217ENST00000439346 EFCC1Q9HA90 598 aa8.61□□□□□ -1.03
CHEK2-217ENST00000439346 IGFBP4P22692 258 aa8.6□□□□□ -1.03
CHEK2-217ENST00000439346 LCE3BQ5TA77 95 aa8.6□□□□□ -1.03
CHEK2-217ENST00000439346 TRPM4Q8TD43 1214 aa8.6□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L15C9J2P7 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L10C9JJH3 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L13C9JLJ4 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L11C9JVI0 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L21D6R901 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L18D6R9N7 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L22D6RA61 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L17D6RBQ6 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L19D6RCP7 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L20D6RJB6 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 J3QW42 95 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 MICAL2O94851 1124 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 EIF2AK2P19525 551 aaKnown RBP8.59□□□□□ -1.03
CHEK2-217ENST00000439346 USP17L24Q0WX57 530 aa8.59□□□□□ -1.03
CHEK2-217ENST00000439346 EPB42P16452 691 aa8.58□□□□□ -1.04
CHEK2-217ENST00000439346 ARSDP51689 593 aa8.58□□□□□ -1.04
CHEK2-217ENST00000439346 ANKMY2Q8IV38 441 aa8.58□□□□□ -1.04
CHEK2-217ENST00000439346 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
CHEK2-217ENST00000439346 FRRS1LQ9P0K9 344 aa8.58□□□□□ -1.04
CHEK2-217ENST00000439346 OPLAHO14841 1288 aa8.57□□□□□ -1.04
CHEK2-217ENST00000439346 GPLD1P80108 840 aa8.57□□□□□ -1.04
CHEK2-217ENST00000439346 DTWD1Q8N5C7 304 aa8.57□□□□□ -1.04
CHEK2-217ENST00000439346 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
CHEK2-217ENST00000439346 LRFN2Q9ULH4 789 aa8.57□□□□□ -1.04
CHEK2-217ENST00000439346 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
CHEK2-217ENST00000439346 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
CHEK2-217ENST00000439346 PROSER2Q86WR7 435 aaPredicted RBP8.56□□□□□ -1.04
CHEK2-217ENST00000439346 NSUN5Q96P11 429 aaKnown RBP8.56□□□□□ -1.04
CHEK2-217ENST00000439346 ARXQ96QS3 562 aa8.56□□□□□ -1.04
CHEK2-217ENST00000439346 DLL1O00548 723 aa8.55□□□□□ -1.04
CHEK2-217ENST00000439346 LMOD1P29536 600 aaPredicted RBP8.55□□□□□ -1.04
CHEK2-217ENST00000439346 PCSK7Q16549 785 aa8.55□□□□□ -1.04
CHEK2-217ENST00000439346 PRR23CQ6ZRP0 262 aa8.55□□□□□ -1.04
CHEK2-217ENST00000439346 RGL4Q8IZJ4 473 aa8.55□□□□□ -1.04
CHEK2-217ENST00000439346 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
CHEK2-217ENST00000439346 WEE1P30291 646 aa8.54□□□□□ -1.04
CHEK2-217ENST00000439346 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
CHEK2-217ENST00000439346 AGGF1Q8N302 714 aaeCLIP8.54□□□□□ -1.04
CHEK2-217ENST00000439346 RNF112Q9ULX5 631 aa8.54□□□□□ -1.04
CHEK2-217ENST00000439346 FAM196BA6NMK8 535 aa8.53□□□□□ -1.04
CHEK2-217ENST00000439346 XYLBO75191 536 aa8.53□□□□□ -1.04
CHEK2-217ENST00000439346 C11orf91Q3C1V1 193 aa8.53□□□□□ -1.04
CHEK2-217ENST00000439346 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
CHEK2-217ENST00000439346 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
CHEK2-217ENST00000439346 CALR3Q96L12 384 aaKnown RBP8.53□□□□□ -1.04
CHEK2-217ENST00000439346 TLR7Q9NYK1 1049 aaKnown RBP8.53□□□□□ -1.04
CHEK2-217ENST00000439346 MMP20O60882 483 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 SSTR4P31391 388 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 NRLP54845 237 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 IL22RA1Q8N6P7 574 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 TTC9Q92623 222 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 VTI1AQ96AJ9 217 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 AKTIPQ9H8T0 292 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 VRTNQ9H8Y1 702 aa8.52□□□□□ -1.05
CHEK2-217ENST00000439346 TREML1Q86YW5 311 aa8.51□□□□□ -1.05
CHEK2-217ENST00000439346 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
CHEK2-217ENST00000439346 TRIM33Q9UPN9 1127 aa8.51□□□□□ -1.05
CHEK2-217ENST00000439346 LOC102724428A0A0B4J2F2 783 aa8.5□□□□□ -1.05
CHEK2-217ENST00000439346 FSTP19883 344 aa8.5□□□□□ -1.05
CHEK2-217ENST00000439346 SIK1P57059 783 aa8.5□□□□□ -1.05
CHEK2-217ENST00000439346 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
CHEK2-217ENST00000439346 MYO19Q96H55 970 aa8.5□□□□□ -1.05
CHEK2-217ENST00000439346 PCMTD2Q9NV79 361 aa8.5□□□□□ -1.05
CHEK2-217ENST00000439346 KCNMB2Q9Y691 235 aa8.5□□□□□ -1.05
CHEK2-217ENST00000439346 F8W735 103 aaPredicted RBP8.49□□□□□ -1.05
CHEK2-217ENST00000439346 FOXO3O43524 673 aa8.49□□□□□ -1.05
CHEK2-217ENST00000439346 SETDB1Q15047 1291 aa8.49□□□□□ -1.05
CHEK2-217ENST00000439346 FAM26DQ5JW98 314 aa8.49□□□□□ -1.05
CHEK2-217ENST00000439346 COX20Q5RI15 118 aa8.49□□□□□ -1.05
CHEK2-217ENST00000439346 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
CHEK2-217ENST00000439346 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
CHEK2-217ENST00000439346 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
CHEK2-217ENST00000439346 MED26O95402 600 aa8.47□□□□□ -1.05
CHEK2-217ENST00000439346 GHRHP01286 108 aa8.47□□□□□ -1.05
CHEK2-217ENST00000439346 PSAPP07602 524 aa8.47□□□□□ -1.05
CHEK2-217ENST00000439346 TXNDC11Q6PKC3 985 aa8.47□□□□□ -1.05
CHEK2-217ENST00000439346 SAP130Q9H0E3 1048 aa8.47□□□□□ -1.05
CHEK2-217ENST00000439346 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
CHEK2-217ENST00000439346 WISP1O95388 367 aa8.46□□□□□ -1.06
CHEK2-217ENST00000439346 EGFRP00533 1210 aa8.46□□□□□ -1.06
CHEK2-217ENST00000439346 GLB1P16278 677 aa8.46□□□□□ -1.06
CHEK2-217ENST00000439346 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.06
CHEK2-217ENST00000439346 ETFBKMTQ8IXQ9 262 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms