RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 DDX58O95786 925 aaKnown RBP17.79■□□□□ 0.44
PRAME-209ENST00000439106 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
PRAME-209ENST00000439106 AOC3Q16853 763 aa17.79■□□□□ 0.44
PRAME-209ENST00000439106 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
PRAME-209ENST00000439106 SMC1BQ8NDV3 1235 aa17.79■□□□□ 0.44
PRAME-209ENST00000439106 FZD9O00144 591 aa17.78■□□□□ 0.44
PRAME-209ENST00000439106 PPIP5K2O43314 1243 aa17.78■□□□□ 0.44
PRAME-209ENST00000439106 FSTL1Q12841 308 aa17.78■□□□□ 0.44
PRAME-209ENST00000439106 KSR2Q6VAB6 950 aa17.78■□□□□ 0.44
PRAME-209ENST00000439106 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
PRAME-209ENST00000439106 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
PRAME-209ENST00000439106 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
PRAME-209ENST00000439106 CWC25Q9NXE8 425 aaPredicted RBP17.78■□□□□ 0.44
PRAME-209ENST00000439106 VAMP4O75379 141 aa17.77■□□□□ 0.44
PRAME-209ENST00000439106 IGKV5-2P06315 115 aa17.77■□□□□ 0.44
PRAME-209ENST00000439106 APLP1P51693 650 aa17.77■□□□□ 0.44
PRAME-209ENST00000439106 SF3B3Q15393 1217 aaKnown RBP17.77■□□□□ 0.44
PRAME-209ENST00000439106 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.44
PRAME-209ENST00000439106 SP8Q8IXZ3 490 aa17.77■□□□□ 0.44
PRAME-209ENST00000439106 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
PRAME-209ENST00000439106 TMX4Q9H1E5 349 aaPredicted RBP17.77■□□□□ 0.44
PRAME-209ENST00000439106 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
PRAME-209ENST00000439106 BBOX1O75936 387 aa17.76■□□□□ 0.43
PRAME-209ENST00000439106 PCCAP05165 728 aaPredicted RBP17.76■□□□□ 0.43
PRAME-209ENST00000439106 DPP8Q6V1X1 898 aaPredicted RBP17.76■□□□□ 0.43
PRAME-209ENST00000439106 MPNDQ8N594 471 aa17.76■□□□□ 0.43
PRAME-209ENST00000439106 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
PRAME-209ENST00000439106 CHMP4AQ9BY43 222 aa17.76■□□□□ 0.43
PRAME-209ENST00000439106 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
PRAME-209ENST00000439106 SCN9AQ15858 1988 aa17.76■□□□□ 0.43
PRAME-209ENST00000439106 FLIIQ13045 1269 aa17.75■□□□□ 0.43
PRAME-209ENST00000439106 GRIPAP1Q4V328 841 aa17.75■□□□□ 0.43
PRAME-209ENST00000439106 EIF6P56537 245 aaKnown RBP17.74■□□□□ 0.43
PRAME-209ENST00000439106 FKBP5Q13451 457 aaPredicted RBP17.74■□□□□ 0.43
PRAME-209ENST00000439106 EAPPQ56P03 285 aaPredicted RBP17.74■□□□□ 0.43
PRAME-209ENST00000439106 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
PRAME-209ENST00000439106 TAF1DQ9H5J8 278 aaPredicted RBP17.74■□□□□ 0.43
PRAME-209ENST00000439106 ZNF521Q96K83 1311 aa17.73■□□□□ 0.43
PRAME-209ENST00000439106 IQCA1LA6NCM1 817 aa17.73■□□□□ 0.43
PRAME-209ENST00000439106 NEURL1BA8MQ27 555 aa17.73■□□□□ 0.43
PRAME-209ENST00000439106 GPC2Q8N158 579 aa17.73■□□□□ 0.43
PRAME-209ENST00000439106 GPR101Q96P66 508 aaPredicted RBP17.73■□□□□ 0.43
PRAME-209ENST00000439106 RTFDC1Q9BY42 306 aaPredicted RBP17.73■□□□□ 0.43
PRAME-209ENST00000439106 A0A1B0GUL6 1792 aa17.73■□□□□ 0.43
PRAME-209ENST00000439106 PDE8AO60658 829 aa17.72■□□□□ 0.43
PRAME-209ENST00000439106 GPSM2P81274 684 aa17.72■□□□□ 0.43
PRAME-209ENST00000439106 NEXNQ0ZGT2 675 aa17.72■□□□□ 0.43
PRAME-209ENST00000439106 MYH16Q9H6N6 1097 aa17.72■□□□□ 0.43
PRAME-209ENST00000439106 HACL1Q9UJ83 578 aa17.72■□□□□ 0.43
PRAME-209ENST00000439106 PSME4Q14997 1843 aa17.72■□□□□ 0.43
PRAME-209ENST00000439106 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
PRAME-209ENST00000439106 EPHX2P34913 555 aa17.71■□□□□ 0.43
PRAME-209ENST00000439106 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
PRAME-209ENST00000439106 SUPT20HQ8NEM7 779 aa17.71■□□□□ 0.43
PRAME-209ENST00000439106 DNAAF4Q8WXU2 420 aa17.71■□□□□ 0.43
PRAME-209ENST00000439106 NSFL1CQ9UNZ2 370 aaKnown RBP17.71■□□□□ 0.43
PRAME-209ENST00000439106 F6X3S4 739 aa17.7■□□□□ 0.42
PRAME-209ENST00000439106 RPS8P62241 208 aaKnown RBP17.7■□□□□ 0.42
PRAME-209ENST00000439106 KIAA2012Q0VF49 1180 aa17.7■□□□□ 0.42
PRAME-209ENST00000439106 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
PRAME-209ENST00000439106 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
PRAME-209ENST00000439106 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
PRAME-209ENST00000439106 POLR2AP24928 1970 aaKnown RBP17.7■□□□□ 0.42
PRAME-209ENST00000439106 TRPM7Q96QT4 1865 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 YDJCA8MPS7 323 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 RIMBP2O15034 1052 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 EPS15P42566 896 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 SCNN1DP51172 638 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 CTSWP56202 376 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 DNAJC5GQ8N7S2 189 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 POLLQ9UGP5 575 aa17.69■□□□□ 0.42
PRAME-209ENST00000439106 C6orf229H3BNL8 230 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 RAD17O75943 681 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 CXCL9Q07325 125 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 GCKRQ14397 625 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 DBNDD1Q9H9R9 158 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 CLEC11AQ9Y240 323 aa17.68■□□□□ 0.42
PRAME-209ENST00000439106 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
PRAME-209ENST00000439106 VPS33BQ9H267 617 aa17.67■□□□□ 0.42
PRAME-209ENST00000439106 GREM2Q9H772 168 aa17.67■□□□□ 0.42
PRAME-209ENST00000439106 ZNF646O15015 1829 aaPredicted RBP17.67■□□□□ 0.42
PRAME-209ENST00000439106 H7C1W4 665 aa17.66■□□□□ 0.42
PRAME-209ENST00000439106 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
PRAME-209ENST00000439106 LMOD1P29536 600 aaPredicted RBP17.66■□□□□ 0.42
PRAME-209ENST00000439106 WASHC4Q2M389 1173 aa17.66■□□□□ 0.42
PRAME-209ENST00000439106 MAP1SQ66K74 1059 aaPredicted RBP17.66■□□□□ 0.42
PRAME-209ENST00000439106 TBC1D16Q8TBP0 767 aa17.66■□□□□ 0.42
PRAME-209ENST00000439106 PCNTO95613 3336 aa17.65■□□□□ 0.42
PRAME-209ENST00000439106 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
PRAME-209ENST00000439106 DOK7Q18PE1 504 aa17.65■□□□□ 0.42
PRAME-209ENST00000439106 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
PRAME-209ENST00000439106 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
PRAME-209ENST00000439106 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
PRAME-209ENST00000439106 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
PRAME-209ENST00000439106 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
PRAME-209ENST00000439106 SHTN1A0MZ66 631 aa17.64■□□□□ 0.41
PRAME-209ENST00000439106 UFL1O94874 794 aa17.64■□□□□ 0.41
PRAME-209ENST00000439106 CASP7P55210 303 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms