RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 SNRPA1P09661 255 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 MTHFSDQ2M296 383 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 PPP1R12BO60237 982 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 GPTP24298 496 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 CREB3L3Q68CJ9 461 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 EIF2AK4Q9P2K8 1649 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 VPS36Q86VN1 386 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 PZPP20742 1482 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 PLCH2O75038 1416 aa12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 ZFYP08048 801 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 ZSCAN29Q8IWY8 852 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-211ENST00000438547 TUBB4AP04350 444 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 UBA7P41226 1012 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 CCDC94Q9BW85 323 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 HSP90AA4PQ58FG1 418 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 COPS6Q7L5N1 327 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 DHX37Q8IY37 1157 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 ZNF444Q8N0Y2 327 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 FAM107BQ9H098 131 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 ITSN2Q9NZM3 1697 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 ZBTB43O43298 467 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 TIGD1Q96MW7 591 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 MARCKSP29966 332 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 ZNF445P59923 1031 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
SEMA4D-211ENST00000438547 INSRP06213 1382 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 SPTLC2O15270 562 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 TMEM266Q2M3C6 531 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 LINS1Q8NG48 757 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 SYCP2Q9BX26 1530 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 ANKRD62A6NC57 917 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 RBM5P52756 815 aaKnown RBP eCLIP12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 CCDC178Q5BJE1 867 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 RUFY3Q7L099 469 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 ANKRD24Q8TF21 1146 aa12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-211ENST00000438547 NAA15Q9BXJ9 866 aaKnown RBP12.83□□□□□ -0.35
SEMA4D-211ENST00000438547 IDEP14735 1019 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 KIF20AO95235 890 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 IFFO1Q0D2I5 559 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 DYDC1Q8WWB3 177 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 JADE2Q9NQC1 790 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 RTL1A6NKG5 1358 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 AMPD3Q01432 767 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 HLTFQ14527 1009 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 ANKRD18AQ8IVF6 992 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 TEX14Q8IWB6 1497 aa12.83□□□□□ -0.36
SEMA4D-211ENST00000438547 CPA1P15085 419 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 WTAPQ15007 396 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 ZRSR2Q15696 482 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 CCDC113Q9H0I3 377 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 LIG1P18858 919 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 KIF5BP33176 963 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 AFMP43652 599 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 CTAGE15A4D2H0 777 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 CTAGE8P0CG41 777 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 MCM6Q14566 821 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 MICALCLQ6ZW33 695 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 CTAGE6Q86UF2 777 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 CTAGE4Q8IX94 777 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 EHBP1Q8NDI1 1231 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 CTAGE1Q96RT6 745 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 BLMP54132 1417 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 IL15P40933 162 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 CEBPAP49715 358 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 SPAG1Q07617 926 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 RNF187Q5TA31 235 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 FAM114A1Q8IWE2 563 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 GTPBP4Q9BZE4 634 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
SEMA4D-211ENST00000438547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms