RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 RASSF7Q02833 373 aa20.73■□□□□ 0.91
CTSD-205ENST00000438213 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
CTSD-205ENST00000438213 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
CTSD-205ENST00000438213 ATP6V0A2Q9Y487 856 aa20.73■□□□□ 0.91
CTSD-205ENST00000438213 LTBP3Q9NS15 1303 aa20.73■□□□□ 0.91
CTSD-205ENST00000438213 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
CTSD-205ENST00000438213 API5Q9BZZ5 524 aaKnown RBP20.72■□□□□ 0.91
CTSD-205ENST00000438213 IPO8O15397 1037 aaKnown RBP20.71■□□□□ 0.91
CTSD-205ENST00000438213 CTSWP56202 376 aa20.71■□□□□ 0.91
CTSD-205ENST00000438213 RPS8P62241 208 aaKnown RBP20.71■□□□□ 0.91
CTSD-205ENST00000438213 FKBP4Q02790 459 aaKnown RBP eCLIP20.71■□□□□ 0.91
CTSD-205ENST00000438213 OLFM4Q6UX06 510 aa20.71■□□□□ 0.91
CTSD-205ENST00000438213 ZNF784Q8NCA9 323 aaPredicted RBP20.71■□□□□ 0.91
CTSD-205ENST00000438213 ARHGAP45Q92619 1136 aa20.71■□□□□ 0.91
CTSD-205ENST00000438213 PLA2G12BQ9BX93 195 aa20.71■□□□□ 0.91
CTSD-205ENST00000438213 GRM8O00222 908 aa20.7■□□□□ 0.9
CTSD-205ENST00000438213 TTLL11Q8NHH1 800 aa20.7■□□□□ 0.9
CTSD-205ENST00000438213 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
CTSD-205ENST00000438213 CASP7P55210 303 aa20.69■□□□□ 0.9
CTSD-205ENST00000438213 PSMD1Q99460 953 aa20.69■□□□□ 0.9
CTSD-205ENST00000438213 CELF1Q92879 486 aaKnown RBP20.68■□□□□ 0.9
CTSD-205ENST00000438213 CCDC85AQ96PX6 553 aaPredicted RBP20.68■□□□□ 0.9
CTSD-205ENST00000438213 CDC5LQ99459 802 aaKnown RBP20.68■□□□□ 0.9
CTSD-205ENST00000438213 SEC31BQ9NQW1 1179 aa20.68■□□□□ 0.9
CTSD-205ENST00000438213 CACNA1SQ13698 1873 aa20.68■□□□□ 0.9
CTSD-205ENST00000438213 DDX60Q8IY21 1712 aaKnown RBP20.67■□□□□ 0.9
CTSD-205ENST00000438213 CCT4P50991 539 aaKnown RBP20.67■□□□□ 0.9
CTSD-205ENST00000438213 MPNDQ8N594 471 aa20.67■□□□□ 0.9
CTSD-205ENST00000438213 ZC3H4Q9UPT8 1303 aaKnown RBP20.67■□□□□ 0.9
CTSD-205ENST00000438213 BCAR3O75815 825 aa20.66■□□□□ 0.9
CTSD-205ENST00000438213 CSF1RP07333 972 aa20.66■□□□□ 0.9
CTSD-205ENST00000438213 PRELPP51888 382 aa20.66■□□□□ 0.9
CTSD-205ENST00000438213 ANKRD18AQ8IVF6 992 aa20.66■□□□□ 0.9
CTSD-205ENST00000438213 SUPT20HQ8NEM7 779 aa20.66■□□□□ 0.9
CTSD-205ENST00000438213 LAMB2P55268 1798 aa20.66■□□□□ 0.9
CTSD-205ENST00000438213 FER1L6Q2WGJ9 1857 aa20.65■□□□□ 0.9
CTSD-205ENST00000438213 DPP8Q6V1X1 898 aaPredicted RBP20.65■□□□□ 0.9
CTSD-205ENST00000438213 FRAT1Q92837 279 aaPredicted RBP20.65■□□□□ 0.9
CTSD-205ENST00000438213 VPS33BQ9H267 617 aa20.65■□□□□ 0.9
CTSD-205ENST00000438213 GREM2Q9H772 168 aa20.65■□□□□ 0.9
CTSD-205ENST00000438213 ZNF277Q9NRM2 450 aaPredicted RBP20.65■□□□□ 0.9
CTSD-205ENST00000438213 SBF1O95248 1867 aa20.64■□□□□ 0.9
CTSD-205ENST00000438213 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.89
CTSD-205ENST00000438213 DPY19L2Q6NUT2 758 aa20.64■□□□□ 0.89
CTSD-205ENST00000438213 GPBP1L1Q9HC44 474 aaPredicted RBP20.64■□□□□ 0.89
CTSD-205ENST00000438213 RTL9Q8NET4 1388 aa20.63■□□□□ 0.89
CTSD-205ENST00000438213 UTYO14607 1347 aa20.63■□□□□ 0.89
CTSD-205ENST00000438213 FOXO4P98177 505 aa20.63■□□□□ 0.89
CTSD-205ENST00000438213 JDP2Q8WYK2 163 aa20.63■□□□□ 0.89
CTSD-205ENST00000438213 NBPF7P0C2Y1 421 aaPredicted RBP20.62■□□□□ 0.89
CTSD-205ENST00000438213 ITGA6P23229 1130 aa20.62■□□□□ 0.89
CTSD-205ENST00000438213 IGHMBP2P38935 993 aaKnown RBP20.62■□□□□ 0.89
CTSD-205ENST00000438213 ATF7IPQ6VMQ6 1270 aa20.62■□□□□ 0.89
CTSD-205ENST00000438213 ZNF526Q8TF50 670 aaPredicted RBP20.62■□□□□ 0.89
CTSD-205ENST00000438213 RTFDC1Q9BY42 306 aaPredicted RBP20.62■□□□□ 0.89
CTSD-205ENST00000438213 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
CTSD-205ENST00000438213 NSFL1CQ9UNZ2 370 aaKnown RBP20.62■□□□□ 0.89
CTSD-205ENST00000438213 HDAC5Q9UQL6 1122 aa20.62■□□□□ 0.89
CTSD-205ENST00000438213 KDM2BQ8NHM5 1336 aa20.61■□□□□ 0.89
CTSD-205ENST00000438213 ANKRD18BA2A2Z9 1011 aa20.61■□□□□ 0.89
CTSD-205ENST00000438213 ZKSCAN2Q63HK3 967 aa20.61■□□□□ 0.89
CTSD-205ENST00000438213 LMBR1LQ6UX01 489 aa20.61■□□□□ 0.89
CTSD-205ENST00000438213 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
CTSD-205ENST00000438213 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
CTSD-205ENST00000438213 IFIT5Q13325 482 aaKnown RBP20.6■□□□□ 0.89
CTSD-205ENST00000438213 LARGE2Q8N3Y3 721 aa20.6■□□□□ 0.89
CTSD-205ENST00000438213 MPHOSPH8Q99549 860 aa20.6■□□□□ 0.89
CTSD-205ENST00000438213 SNED1Q8TER0 1413 aa20.6■□□□□ 0.89
CTSD-205ENST00000438213 TAF1P21675 1872 aa20.59■□□□□ 0.89
CTSD-205ENST00000438213 CCDC88AQ3V6T2 1871 aa20.59■□□□□ 0.89
CTSD-205ENST00000438213 GLTPD2A6NH11 291 aa20.59■□□□□ 0.89
CTSD-205ENST00000438213 CCDC57Q2TAC2 916 aa20.59■□□□□ 0.89
CTSD-205ENST00000438213 FAM161AQ3B820 660 aa20.59■□□□□ 0.89
CTSD-205ENST00000438213 INTS3Q68E01 1043 aaKnown RBP20.59■□□□□ 0.89
CTSD-205ENST00000438213 SUCLG2Q96I99 432 aa20.59■□□□□ 0.89
CTSD-205ENST00000438213 ANKIB1Q9P2G1 1089 aa20.59■□□□□ 0.89
CTSD-205ENST00000438213 C6orf229H3BNL8 230 aa20.58■□□□□ 0.89
CTSD-205ENST00000438213 PPIP5K2O43314 1243 aa20.58■□□□□ 0.89
CTSD-205ENST00000438213 TRIM27P14373 513 aa20.58■□□□□ 0.89
CTSD-205ENST00000438213 GPSM2P81274 684 aa20.58■□□□□ 0.89
CTSD-205ENST00000438213 EPHA10Q5JZY3 1008 aa20.58■□□□□ 0.89
CTSD-205ENST00000438213 SLC51AQ86UW1 340 aa20.58■□□□□ 0.89
CTSD-205ENST00000438213 PODXL2Q9NZ53 605 aa20.58■□□□□ 0.89
CTSD-205ENST00000438213 MYH3P11055 1940 aa20.57■□□□□ 0.88
CTSD-205ENST00000438213 EYA3Q99504 573 aa20.57■□□□□ 0.88
CTSD-205ENST00000438213 UBTFL1P0CB47 393 aaPredicted RBP20.56■□□□□ 0.88
CTSD-205ENST00000438213 AOC3Q16853 763 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 NIM1KQ8IY84 436 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 CLUAP1Q96AJ1 413 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 KAZALD1Q96I82 304 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 GGA1Q9UJY5 639 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 MINPP1Q9UNW1 487 aa20.56■□□□□ 0.88
CTSD-205ENST00000438213 FZD9O00144 591 aa20.55■□□□□ 0.88
CTSD-205ENST00000438213 EIF6P56537 245 aaKnown RBP20.55■□□□□ 0.88
CTSD-205ENST00000438213 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
CTSD-205ENST00000438213 BICC1Q9H694 974 aaKnown RBP20.55■□□□□ 0.88
CTSD-205ENST00000438213 POLLQ9UGP5 575 aa20.55■□□□□ 0.88
CTSD-205ENST00000438213 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms