RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
TNFRSF1A-203ENST00000437813 CXCL9Q07325 125 aa18.72■□□□□ 0.59
TNFRSF1A-203ENST00000437813 MAP1SQ66K74 1059 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-203ENST00000437813 NIM1KQ8IY84 436 aa18.72■□□□□ 0.59
TNFRSF1A-203ENST00000437813 CNTROBQ8N137 903 aa18.72■□□□□ 0.59
TNFRSF1A-203ENST00000437813 PHAXQ9H814 394 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1A-203ENST00000437813 HSPA1AP0DMV8 641 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 HSPA1BP0DMV9 641 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 DDX46Q7L014 1031 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 TMC4Q7Z404 712 aa18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 MPNDQ8N594 471 aa18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 SUPT20HQ8NEM7 779 aa18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 MKRN1Q9UHC7 482 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 ZNRF3Q9ULT6 936 aa18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 GJA3Q9Y6H8 435 aa18.71■□□□□ 0.59
TNFRSF1A-203ENST00000437813 TMEM88BA6NKF7 163 aa18.7■□□□□ 0.58
TNFRSF1A-203ENST00000437813 CALD1Q05682 793 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1A-203ENST00000437813 DPP8Q6V1X1 898 aaPredicted RBP18.7■□□□□ 0.58
TNFRSF1A-203ENST00000437813 CELF1Q92879 486 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1A-203ENST00000437813 GPRC5DQ9NZD1 345 aa18.7■□□□□ 0.58
TNFRSF1A-203ENST00000437813 YDJCA8MPS7 323 aa18.69■□□□□ 0.58
TNFRSF1A-203ENST00000437813 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
TNFRSF1A-203ENST00000437813 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1A-203ENST00000437813 CCDC27Q2M243 656 aa18.68■□□□□ 0.58
TNFRSF1A-203ENST00000437813 USP50Q70EL3 339 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1A-203ENST00000437813 TRPM7Q96QT4 1865 aa18.68■□□□□ 0.58
TNFRSF1A-203ENST00000437813 THSD7BQ9C0I4 1608 aa18.67■□□□□ 0.58
TNFRSF1A-203ENST00000437813 RASSF10A6NK89 507 aa18.67■□□□□ 0.58
TNFRSF1A-203ENST00000437813 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-203ENST00000437813 ZBTB38Q8NAP3 1195 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-203ENST00000437813 PGAP2Q9UHJ9 254 aa18.67■□□□□ 0.58
TNFRSF1A-203ENST00000437813 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
TNFRSF1A-203ENST00000437813 CDHR2Q9BYE9 1310 aa18.67■□□□□ 0.58
TNFRSF1A-203ENST00000437813 LMOD1P29536 600 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-203ENST00000437813 VEGFBP49765 207 aa18.66■□□□□ 0.58
TNFRSF1A-203ENST00000437813 FMR1Q06787 632 aaKnown RBP eCLIP18.66■□□□□ 0.58
TNFRSF1A-203ENST00000437813 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-203ENST00000437813 SCN9AQ15858 1988 aa18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 GMPSP49915 693 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 RIC3Q7Z5B4 369 aa18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 CCDC191Q8NCU4 936 aa18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 ADARB2Q9NS39 739 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 POLLQ9UGP5 575 aa18.65■□□□□ 0.58
TNFRSF1A-203ENST00000437813 PCCAP05165 728 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF1A-203ENST00000437813 CST9Q5W186 159 aa18.64■□□□□ 0.57
TNFRSF1A-203ENST00000437813 CIAPIN1Q6FI81 312 aa18.64■□□□□ 0.57
TNFRSF1A-203ENST00000437813 TSR2Q969E8 191 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-203ENST00000437813 METTL22Q9BUU2 404 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF1A-203ENST00000437813 RAD17O75943 681 aa18.63■□□□□ 0.57
TNFRSF1A-203ENST00000437813 HIRAP54198 1017 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-203ENST00000437813 RPS8P62241 208 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1A-203ENST00000437813 GPSM2P81274 684 aa18.63■□□□□ 0.57
TNFRSF1A-203ENST00000437813 CCDC30Q5VVM6 783 aa18.63■□□□□ 0.57
TNFRSF1A-203ENST00000437813 MYD88Q99836 296 aa18.63■□□□□ 0.57
TNFRSF1A-203ENST00000437813 SEC31BQ9NQW1 1179 aa18.63■□□□□ 0.57
TNFRSF1A-203ENST00000437813 SHTN1A0MZ66 631 aa18.62■□□□□ 0.57
TNFRSF1A-203ENST00000437813 TRAF5O00463 557 aa18.62■□□□□ 0.57
TNFRSF1A-203ENST00000437813 IGKV5-2P06315 115 aa18.62■□□□□ 0.57
TNFRSF1A-203ENST00000437813 PODXL2Q9NZ53 605 aa18.62■□□□□ 0.57
TNFRSF1A-203ENST00000437813 IL16Q14005 1332 aa18.62■□□□□ 0.57
TNFRSF1A-203ENST00000437813 RTL9Q8NET4 1388 aa18.61■□□□□ 0.57
TNFRSF1A-203ENST00000437813 FOXN1O15353 648 aa18.61■□□□□ 0.57
TNFRSF1A-203ENST00000437813 TNIP1Q15025 636 aa18.61■□□□□ 0.57
TNFRSF1A-203ENST00000437813 WASHC4Q2M389 1173 aa18.61■□□□□ 0.57
TNFRSF1A-203ENST00000437813 WBP1LQ9NX94 342 aa18.61■□□□□ 0.57
TNFRSF1A-203ENST00000437813 NSFL1CQ9UNZ2 370 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-203ENST00000437813 MYH3P11055 1940 aa18.61■□□□□ 0.57
TNFRSF1A-203ENST00000437813 PSME4Q14997 1843 aa18.6■□□□□ 0.57
TNFRSF1A-203ENST00000437813 TBC1D16Q8TBP0 767 aa18.6■□□□□ 0.57
TNFRSF1A-203ENST00000437813 TRPM4Q8TD43 1214 aa18.6■□□□□ 0.57
TNFRSF1A-203ENST00000437813 CWC25Q9NXE8 425 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-203ENST00000437813 MAP3K2Q9Y2U5 619 aa18.6■□□□□ 0.57
TNFRSF1A-203ENST00000437813 CACNA1FO60840 1977 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 PDE8AO60658 829 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 DEFB115Q30KQ5 88 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 KSR2Q6VAB6 950 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 G2E3Q7L622 706 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 ZC3H15Q8WU90 426 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 DPF2Q92785 391 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 JARID2Q92833 1246 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 KCNQ5Q9NR82 932 aa18.59■□□□□ 0.57
TNFRSF1A-203ENST00000437813 ZNF609O15014 1411 aa18.58■□□□□ 0.57
TNFRSF1A-203ENST00000437813 PSMD14O00487 310 aa18.58■□□□□ 0.56
TNFRSF1A-203ENST00000437813 GPR101Q96P66 508 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-203ENST00000437813 DBNDD1Q9H9R9 158 aa18.58■□□□□ 0.56
TNFRSF1A-203ENST00000437813 CNOT7Q9UIV1 285 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1A-203ENST00000437813 ZNF646O15015 1829 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-203ENST00000437813 WDR33Q9C0J8 1336 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-203ENST00000437813 DDX58O95786 925 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-203ENST00000437813 TWISTNBQ3B726 338 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-203ENST00000437813 TNS4Q8IZW8 715 aa18.57■□□□□ 0.56
TNFRSF1A-203ENST00000437813 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-203ENST00000437813 TLL2Q9Y6L7 1015 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms