RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 DPP8Q6V1X1 898 aaPredicted RBP18.61■□□□□ 0.57
LINC01006-204ENST00000435354 PNMA8AQ86V59 439 aaPredicted RBP18.61■□□□□ 0.57
LINC01006-204ENST00000435354 VPS33BQ9H267 617 aa18.61■□□□□ 0.57
LINC01006-204ENST00000435354 CLEC11AQ9Y240 323 aa18.61■□□□□ 0.57
LINC01006-204ENST00000435354 EPS15P42566 896 aa18.6■□□□□ 0.57
LINC01006-204ENST00000435354 SF3B3Q15393 1217 aaKnown RBP18.6■□□□□ 0.57
LINC01006-204ENST00000435354 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
LINC01006-204ENST00000435354 MPNDQ8N594 471 aa18.6■□□□□ 0.57
LINC01006-204ENST00000435354 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
LINC01006-204ENST00000435354 MAP1SQ66K74 1059 aaPredicted RBP18.59■□□□□ 0.57
LINC01006-204ENST00000435354 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
LINC01006-204ENST00000435354 SUPT20HQ8NEM7 779 aa18.59■□□□□ 0.57
LINC01006-204ENST00000435354 MKRN1Q9UHC7 482 aaKnown RBP18.59■□□□□ 0.57
LINC01006-204ENST00000435354 LMOD1P29536 600 aaPredicted RBP18.58■□□□□ 0.56
LINC01006-204ENST00000435354 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
LINC01006-204ENST00000435354 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
LINC01006-204ENST00000435354 CNTROBQ8N137 903 aa18.58■□□□□ 0.56
LINC01006-204ENST00000435354 CELF1Q92879 486 aaKnown RBP18.58■□□□□ 0.56
LINC01006-204ENST00000435354 ZNRF3Q9ULT6 936 aa18.58■□□□□ 0.56
LINC01006-204ENST00000435354 IRS4O14654 1257 aaPredicted RBP18.57■□□□□ 0.56
LINC01006-204ENST00000435354 CXCL9Q07325 125 aa18.57■□□□□ 0.56
LINC01006-204ENST00000435354 TMC4Q7Z404 712 aa18.57■□□□□ 0.56
LINC01006-204ENST00000435354 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
LINC01006-204ENST00000435354 CNTNAP1P78357 1384 aa18.56■□□□□ 0.56
LINC01006-204ENST00000435354 TMEM88BA6NKF7 163 aa18.56■□□□□ 0.56
LINC01006-204ENST00000435354 HSPA1AP0DMV8 641 aaKnown RBP18.56■□□□□ 0.56
LINC01006-204ENST00000435354 HSPA1BP0DMV9 641 aaKnown RBP18.56■□□□□ 0.56
LINC01006-204ENST00000435354 COL13A1Q5TAT6 717 aaPredicted RBP18.56■□□□□ 0.56
LINC01006-204ENST00000435354 ZBTB38Q8NAP3 1195 aaPredicted RBP18.56■□□□□ 0.56
LINC01006-204ENST00000435354 MYD88Q99836 296 aa18.56■□□□□ 0.56
LINC01006-204ENST00000435354 CCDC27Q2M243 656 aa18.55■□□□□ 0.56
LINC01006-204ENST00000435354 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
LINC01006-204ENST00000435354 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
LINC01006-204ENST00000435354 GPRC5DQ9NZD1 345 aa18.55■□□□□ 0.56
LINC01006-204ENST00000435354 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
LINC01006-204ENST00000435354 USP50Q70EL3 339 aaPredicted RBP18.54■□□□□ 0.56
LINC01006-204ENST00000435354 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
LINC01006-204ENST00000435354 RAD17O75943 681 aa18.53■□□□□ 0.56
LINC01006-204ENST00000435354 GMPSP49915 693 aaPredicted RBP18.53■□□□□ 0.56
LINC01006-204ENST00000435354 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
LINC01006-204ENST00000435354 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
LINC01006-204ENST00000435354 METTL22Q9BUU2 404 aaPredicted RBP18.53■□□□□ 0.56
LINC01006-204ENST00000435354 PCCAP05165 728 aaPredicted RBP18.52■□□□□ 0.56
LINC01006-204ENST00000435354 GPSM2P81274 684 aa18.52■□□□□ 0.56
LINC01006-204ENST00000435354 FMR1Q06787 632 aaKnown RBP eCLIP18.52■□□□□ 0.56
LINC01006-204ENST00000435354 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
LINC01006-204ENST00000435354 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
LINC01006-204ENST00000435354 CWC25Q9NXE8 425 aaPredicted RBP18.52■□□□□ 0.56
LINC01006-204ENST00000435354 NSFL1CQ9UNZ2 370 aaKnown RBP18.52■□□□□ 0.56
LINC01006-204ENST00000435354 MAP3K2Q9Y2U5 619 aa18.52■□□□□ 0.56
LINC01006-204ENST00000435354 DDX58O95786 925 aaKnown RBP18.51■□□□□ 0.55
LINC01006-204ENST00000435354 RPS8P62241 208 aaKnown RBP18.51■□□□□ 0.55
LINC01006-204ENST00000435354 CHMP4AQ9BY43 222 aa18.51■□□□□ 0.55
LINC01006-204ENST00000435354 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
LINC01006-204ENST00000435354 ADARB2Q9NS39 739 aaKnown RBP18.51■□□□□ 0.55
LINC01006-204ENST00000435354 POLLQ9UGP5 575 aa18.51■□□□□ 0.55
LINC01006-204ENST00000435354 IL16Q14005 1332 aa18.5■□□□□ 0.55
LINC01006-204ENST00000435354 TRPM7Q96QT4 1865 aa18.5■□□□□ 0.55
LINC01006-204ENST00000435354 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
LINC01006-204ENST00000435354 VEGFBP49765 207 aa18.5■□□□□ 0.55
LINC01006-204ENST00000435354 TNIP1Q15025 636 aa18.5■□□□□ 0.55
LINC01006-204ENST00000435354 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 PI4KAP2A4QPH2 592 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 RASSF10A6NK89 507 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 TRAF5O00463 557 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 WASHC4Q2M389 1173 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 TWISTNBQ3B726 338 aaPredicted RBP18.49■□□□□ 0.55
LINC01006-204ENST00000435354 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
LINC01006-204ENST00000435354 KSR2Q6VAB6 950 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 PI4KAP1Q8N8J0 262 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 DBNDD1Q9H9R9 158 aa18.49■□□□□ 0.55
LINC01006-204ENST00000435354 SHTN1A0MZ66 631 aa18.48■□□□□ 0.55
LINC01006-204ENST00000435354 C6orf229H3BNL8 230 aa18.48■□□□□ 0.55
LINC01006-204ENST00000435354 RIMBP2O15034 1052 aa18.48■□□□□ 0.55
LINC01006-204ENST00000435354 PDE8AO60658 829 aa18.48■□□□□ 0.55
LINC01006-204ENST00000435354 HSP90B1P14625 803 aaKnown RBP18.48■□□□□ 0.55
LINC01006-204ENST00000435354 G2E3Q7L622 706 aa18.48■□□□□ 0.55
LINC01006-204ENST00000435354 TBC1D16Q8TBP0 767 aa18.48■□□□□ 0.55
LINC01006-204ENST00000435354 GPR101Q96P66 508 aaPredicted RBP18.48■□□□□ 0.55
LINC01006-204ENST00000435354 SCN9AQ15858 1988 aa18.48■□□□□ 0.55
LINC01006-204ENST00000435354 ANP32CO43423 234 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 HIRAP54198 1017 aaPredicted RBP18.47■□□□□ 0.55
LINC01006-204ENST00000435354 CCDC152Q4G0S7 254 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 TRPM4Q8TD43 1214 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 CCDC85AQ96PX6 553 aaPredicted RBP18.47■□□□□ 0.55
LINC01006-204ENST00000435354 BCL2L13Q9BXK5 485 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 STK31Q9BXU1 1019 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 MYH3P11055 1940 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
LINC01006-204ENST00000435354 PSMD14O00487 310 aa18.46■□□□□ 0.55
LINC01006-204ENST00000435354 DOK7Q18PE1 504 aa18.46■□□□□ 0.55
LINC01006-204ENST00000435354 DEFB115Q30KQ5 88 aa18.46■□□□□ 0.55
LINC01006-204ENST00000435354 CST9Q5W186 159 aa18.46■□□□□ 0.55
LINC01006-204ENST00000435354 KCNQ5Q9NR82 932 aa18.46■□□□□ 0.55
LINC01006-204ENST00000435354 PGAP2Q9UHJ9 254 aa18.46■□□□□ 0.55
LINC01006-204ENST00000435354 CNOT7Q9UIV1 285 aaKnown RBP18.46■□□□□ 0.55
LINC01006-204ENST00000435354 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
LINC01006-204ENST00000435354 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms