RNA–Protein interactions for RNA: ENST00000433436.6

CLTA-204, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-204ENST00000433436 CCDC85AQ96PX6 553 aaPredicted RBP29.27■■■□□ 2.28
CLTA-204ENST00000433436 FER1L6Q2WGJ9 1857 aa29.27■■■□□ 2.28
CLTA-204ENST00000433436 LTBP3Q9NS15 1303 aa29.26■■■□□ 2.27
CLTA-204ENST00000433436 SBF1O95248 1867 aa29.26■■■□□ 2.27
CLTA-204ENST00000433436 RARSP54136 660 aaKnown RBP29.26■■■□□ 2.27
CLTA-204ENST00000433436 CC2D2BQ6DHV5 1058 aa29.26■■■□□ 2.27
CLTA-204ENST00000433436 TMX4Q9H1E5 349 aaPredicted RBP29.26■■■□□ 2.27
CLTA-204ENST00000433436 ATP6V0A2Q9Y487 856 aa29.26■■■□□ 2.27
CLTA-204ENST00000433436 FKBP4Q02790 459 aaKnown RBP eCLIP29.25■■■□□ 2.27
CLTA-204ENST00000433436 CCDC152Q4G0S7 254 aa29.25■■■□□ 2.27
CLTA-204ENST00000433436 SRCIN1Q9C0H9 1055 aa29.25■■■□□ 2.27
CLTA-204ENST00000433436 CELF1Q92879 486 aaKnown RBP29.24■■■□□ 2.27
CLTA-204ENST00000433436 NOB1Q9ULX3 412 aaKnown RBP29.24■■■□□ 2.27
CLTA-204ENST00000433436 TAF1P21675 1872 aa29.23■■■□□ 2.27
CLTA-204ENST00000433436 CASP7P55210 303 aa29.23■■■□□ 2.27
CLTA-204ENST00000433436 CTSWP56202 376 aa29.23■■■□□ 2.27
CLTA-204ENST00000433436 SEC31BQ9NQW1 1179 aa29.23■■■□□ 2.27
CLTA-204ENST00000433436 SP8Q8IXZ3 490 aa29.22■■■□□ 2.27
CLTA-204ENST00000433436 ZNF277Q9NRM2 450 aaPredicted RBP29.22■■■□□ 2.27
CLTA-204ENST00000433436 ALDH1L1O75891 902 aa29.21■■■□□ 2.27
CLTA-204ENST00000433436 GRIPAP1Q4V328 841 aa29.2■■■□□ 2.26
CLTA-204ENST00000433436 TTLL11Q8NHH1 800 aa29.2■■■□□ 2.26
CLTA-204ENST00000433436 C9orf78Q9NZ63 289 aaPredicted RBP29.2■■■□□ 2.26
CLTA-204ENST00000433436 CCDC88AQ3V6T2 1871 aa29.2■■■□□ 2.26
CLTA-204ENST00000433436 SNED1Q8TER0 1413 aa29.2■■■□□ 2.26
CLTA-204ENST00000433436 GRM8O00222 908 aa29.19■■■□□ 2.26
CLTA-204ENST00000433436 BRPF1P55201 1214 aaPredicted RBP29.19■■■□□ 2.26
CLTA-204ENST00000433436 RPS8P62241 208 aaKnown RBP29.19■■■□□ 2.26
CLTA-204ENST00000433436 PSMD1Q99460 953 aa29.19■■■□□ 2.26
CLTA-204ENST00000433436 GPBP1L1Q9HC44 474 aaPredicted RBP29.19■■■□□ 2.26
CLTA-204ENST00000433436 TMC4Q7Z404 712 aa29.18■■■□□ 2.26
CLTA-204ENST00000433436 PLA2G12BQ9BX93 195 aa29.18■■■□□ 2.26
CLTA-204ENST00000433436 COL4A1P02462 1669 aa29.18■■■□□ 2.26
CLTA-204ENST00000433436 GREM2Q9H772 168 aa29.17■■■□□ 2.26
CLTA-204ENST00000433436 BCAR3O75815 825 aa29.16■■■□□ 2.26
CLTA-204ENST00000433436 IARSP41252 1262 aaKnown RBP29.16■■■□□ 2.26
CLTA-204ENST00000433436 MPNDQ8N594 471 aa29.16■■■□□ 2.26
CLTA-204ENST00000433436 DPP8Q6V1X1 898 aaPredicted RBP29.15■■■□□ 2.26
CLTA-204ENST00000433436 ZC3H4Q9UPT8 1303 aaKnown RBP29.15■■■□□ 2.26
CLTA-204ENST00000433436 API5Q9BZZ5 524 aaKnown RBP29.14■■■□□ 2.26
CLTA-204ENST00000433436 FOXO4P98177 505 aa29.13■■■□□ 2.25
CLTA-204ENST00000433436 ANKRD18AQ8IVF6 992 aa29.13■■■□□ 2.25
CLTA-204ENST00000433436 KIF16BQ96L93 1317 aa29.13■■■□□ 2.25
CLTA-204ENST00000433436 CSF1RP07333 972 aa29.12■■■□□ 2.25
CLTA-204ENST00000433436 NBPF7P0C2Y1 421 aaPredicted RBP29.12■■■□□ 2.25
CLTA-204ENST00000433436 FRAT1Q92837 279 aaPredicted RBP29.12■■■□□ 2.25
CLTA-204ENST00000433436 CDC5LQ99459 802 aaKnown RBP29.12■■■□□ 2.25
CLTA-204ENST00000433436 NSFL1CQ9UNZ2 370 aaKnown RBP29.12■■■□□ 2.25
CLTA-204ENST00000433436 TIAM2Q8IVF5 1701 aa29.11■■■□□ 2.25
CLTA-204ENST00000433436 FAM161AQ3B820 660 aa29.11■■■□□ 2.25
CLTA-204ENST00000433436 EPHA10Q5JZY3 1008 aa29.11■■■□□ 2.25
CLTA-204ENST00000433436 MYH3P11055 1940 aa29.11■■■□□ 2.25
CLTA-204ENST00000433436 RTL9Q8NET4 1388 aa29.11■■■□□ 2.25
CLTA-204ENST00000433436 ITGA6P23229 1130 aa29.1■■■□□ 2.25
CLTA-204ENST00000433436 GPSM2P81274 684 aa29.1■■■□□ 2.25
CLTA-204ENST00000433436 SUPT20HQ8NEM7 779 aa29.1■■■□□ 2.25
CLTA-204ENST00000433436 ARHGAP45Q92619 1136 aa29.1■■■□□ 2.25
CLTA-204ENST00000433436 RTFDC1Q9BY42 306 aaPredicted RBP29.1■■■□□ 2.25
CLTA-204ENST00000433436 CHMP3Q9Y3E7 222 aa29.1■■■□□ 2.25
CLTA-204ENST00000433436 KDM2BQ8NHM5 1336 aa29.1■■■□□ 2.25
CLTA-204ENST00000433436 IPO8O15397 1037 aaKnown RBP29.09■■■□□ 2.25
CLTA-204ENST00000433436 CCT4P50991 539 aaKnown RBP29.09■■■□□ 2.25
CLTA-204ENST00000433436 LARGE2Q8N3Y3 721 aa29.09■■■□□ 2.25
CLTA-204ENST00000433436 SUCLG2Q96I99 432 aa29.09■■■□□ 2.25
CLTA-204ENST00000433436 DICER1Q9UPY3 1922 aaKnown RBP29.09■■■□□ 2.25
CLTA-204ENST00000433436 GLTPD2A6NH11 291 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 PPIP5K2O43314 1243 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 AOC3Q16853 763 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 DPY19L2Q6NUT2 758 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 LMBR1LQ6UX01 489 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 JDP2Q8WYK2 163 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 NMRK2Q9NPI5 230 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 UTYO14607 1347 aa29.08■■■□□ 2.25
CLTA-204ENST00000433436 USP44Q9H0E7 712 aa29.07■■■□□ 2.24
CLTA-204ENST00000433436 LRRC37AA6NMS7 1700 aa29.06■■■□□ 2.24
CLTA-204ENST00000433436 KAZALD1Q96I82 304 aa29.06■■■□□ 2.24
CLTA-204ENST00000433436 ANKIB1Q9P2G1 1089 aa29.06■■■□□ 2.24
CLTA-204ENST00000433436 ANKRD18BA2A2Z9 1011 aa29.05■■■□□ 2.24
CLTA-204ENST00000433436 C6orf229H3BNL8 230 aa29.05■■■□□ 2.24
CLTA-204ENST00000433436 IGHMBP2P38935 993 aaKnown RBP29.05■■■□□ 2.24
CLTA-204ENST00000433436 BSDC1Q9NW68 430 aaPredicted RBP29.05■■■□□ 2.24
CLTA-204ENST00000433436 TRIM27P14373 513 aa29.04■■■□□ 2.24
CLTA-204ENST00000433436 IFIT5Q13325 482 aaKnown RBP29.04■■■□□ 2.24
CLTA-204ENST00000433436 ATF7IPQ6VMQ6 1270 aa29.04■■■□□ 2.24
CLTA-204ENST00000433436 VPS33BQ9H267 617 aa29.04■■■□□ 2.24
CLTA-204ENST00000433436 RRAGCQ9HB90 399 aa29.04■■■□□ 2.24
CLTA-204ENST00000433436 POLLQ9UGP5 575 aa29.04■■■□□ 2.24
CLTA-204ENST00000433436 TNNQ9UQP3 1299 aa29.04■■■□□ 2.24
CLTA-204ENST00000433436 COL4A5P29400 1685 aa29.03■■■□□ 2.24
CLTA-204ENST00000433436 DDNO94850 711 aaPredicted RBP29.03■■■□□ 2.24
CLTA-204ENST00000433436 NIM1KQ8IY84 436 aa29.03■■■□□ 2.24
CLTA-204ENST00000433436 ZNF541Q9H0D2 1346 aa29.02■■■□□ 2.24
CLTA-204ENST00000433436 FZD9O00144 591 aa29.02■■■□□ 2.24
CLTA-204ENST00000433436 TBC1D16Q8TBP0 767 aa29.02■■■□□ 2.24
CLTA-204ENST00000433436 CLUAP1Q96AJ1 413 aa29.02■■■□□ 2.24
CLTA-204ENST00000433436 MPHOSPH8Q99549 860 aa29.02■■■□□ 2.24
CLTA-204ENST00000433436 BICC1Q9H694 974 aaKnown RBP29.02■■■□□ 2.24
CLTA-204ENST00000433436 MINPP1Q9UNW1 487 aa29.02■■■□□ 2.24
CLTA-204ENST00000433436 DUOX1Q9NRD9 1551 aa29.01■■■□□ 2.24
CLTA-204ENST00000433436 KIF3CO14782 793 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms