RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 TRAF5O00463 557 aa18.08■□□□□ 0.48
SEC13-211ENST00000431352 HOXB7P09629 217 aa18.08■□□□□ 0.48
SEC13-211ENST00000431352 CXCL9Q07325 125 aa18.08■□□□□ 0.48
SEC13-211ENST00000431352 ANKRD13DQ6ZTN6 518 aa18.08■□□□□ 0.48
SEC13-211ENST00000431352 PAXIP1Q6ZW49 1069 aaPredicted RBP18.08■□□□□ 0.48
SEC13-211ENST00000431352 FAM89AQ96GI7 184 aa18.08■□□□□ 0.48
SEC13-211ENST00000431352 CFAP44Q96MT7 982 aa18.08■□□□□ 0.48
SEC13-211ENST00000431352 RTFDC1Q9BY42 306 aaPredicted RBP18.08■□□□□ 0.48
SEC13-211ENST00000431352 DBF4Q9UBU7 674 aaPredicted RBP18.08■□□□□ 0.48
SEC13-211ENST00000431352 TAF1P21675 1872 aa18.07■□□□□ 0.48
SEC13-211ENST00000431352 DDX60Q8IY21 1712 aaKnown RBP18.07■□□□□ 0.48
SEC13-211ENST00000431352 RAD17O75943 681 aa18.07■□□□□ 0.48
SEC13-211ENST00000431352 GMPSP49915 693 aaPredicted RBP18.07■□□□□ 0.48
SEC13-211ENST00000431352 GRM1Q13255 1194 aa18.07■□□□□ 0.48
SEC13-211ENST00000431352 USP50Q70EL3 339 aaPredicted RBP18.07■□□□□ 0.48
SEC13-211ENST00000431352 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
SEC13-211ENST00000431352 GPRC5DQ9NZD1 345 aa18.07■□□□□ 0.48
SEC13-211ENST00000431352 DUOX1Q9NRD9 1551 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 RASSF10A6NK89 507 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 KIAA2012Q0VF49 1180 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 DEFB115Q30KQ5 88 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 ISCA1Q9BUE6 129 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 VPS33BQ9H267 617 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 ADARB2Q9NS39 739 aaKnown RBP18.06■□□□□ 0.48
SEC13-211ENST00000431352 HYPKQ9NX55 129 aa18.06■□□□□ 0.48
SEC13-211ENST00000431352 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
SEC13-211ENST00000431352 APAF1O14727 1248 aa18.05■□□□□ 0.48
SEC13-211ENST00000431352 CIAPIN1Q6FI81 312 aa18.05■□□□□ 0.48
SEC13-211ENST00000431352 CELF1Q92879 486 aaKnown RBP18.05■□□□□ 0.48
SEC13-211ENST00000431352 WDR33Q9C0J8 1336 aaKnown RBP18.04■□□□□ 0.48
SEC13-211ENST00000431352 COL4A1P02462 1669 aa18.04■□□□□ 0.48
SEC13-211ENST00000431352 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
SEC13-211ENST00000431352 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
SEC13-211ENST00000431352 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
SEC13-211ENST00000431352 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
SEC13-211ENST00000431352 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
SEC13-211ENST00000431352 SHTN1A0MZ66 631 aa18.02■□□□□ 0.48
SEC13-211ENST00000431352 YDJCA8MPS7 323 aa18.02■□□□□ 0.48
SEC13-211ENST00000431352 IRS4O14654 1257 aaPredicted RBP18.02■□□□□ 0.48
SEC13-211ENST00000431352 TNIP1Q15025 636 aa18.02■□□□□ 0.48
SEC13-211ENST00000431352 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
SEC13-211ENST00000431352 IFT57Q9NWB7 429 aa18.02■□□□□ 0.48
SEC13-211ENST00000431352 C6orf229H3BNL8 230 aa18.01■□□□□ 0.47
SEC13-211ENST00000431352 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
SEC13-211ENST00000431352 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
SEC13-211ENST00000431352 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
SEC13-211ENST00000431352 TRPM4Q8TD43 1214 aa18.01■□□□□ 0.47
SEC13-211ENST00000431352 GPR101Q96P66 508 aaPredicted RBP18.01■□□□□ 0.47
SEC13-211ENST00000431352 MYD88Q99836 296 aa18.01■□□□□ 0.47
SEC13-211ENST00000431352 GLIS2Q9BZE0 524 aaPredicted RBP18.01■□□□□ 0.47
SEC13-211ENST00000431352 PHAXQ9H814 394 aaKnown RBP18.01■□□□□ 0.47
SEC13-211ENST00000431352 DBNDD1Q9H9R9 158 aa18.01■□□□□ 0.47
SEC13-211ENST00000431352 WBP1LQ9NX94 342 aa18.01■□□□□ 0.47
SEC13-211ENST00000431352 LBX1P52954 281 aa18■□□□□ 0.47
SEC13-211ENST00000431352 GNAI1P63096 354 aa18■□□□□ 0.47
SEC13-211ENST00000431352 GPSM2P81274 684 aa18■□□□□ 0.47
SEC13-211ENST00000431352 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
SEC13-211ENST00000431352 WASHC4Q2M389 1173 aa18■□□□□ 0.47
SEC13-211ENST00000431352 CST9Q5W186 159 aa18■□□□□ 0.47
SEC13-211ENST00000431352 CYP4F22Q6NT55 531 aa18■□□□□ 0.47
SEC13-211ENST00000431352 CAPNS2Q96L46 248 aa18■□□□□ 0.47
SEC13-211ENST00000431352 ZNF408Q9H9D4 720 aa18■□□□□ 0.47
SEC13-211ENST00000431352 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
SEC13-211ENST00000431352 CELF2O95319 508 aaKnown RBP17.99■□□□□ 0.47
SEC13-211ENST00000431352 JARID2Q92833 1246 aaPredicted RBP17.99■□□□□ 0.47
SEC13-211ENST00000431352 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
SEC13-211ENST00000431352 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
SEC13-211ENST00000431352 TRPM7Q96QT4 1865 aa17.99■□□□□ 0.47
SEC13-211ENST00000431352 HIRAP54198 1017 aaPredicted RBP17.98■□□□□ 0.47
SEC13-211ENST00000431352 DOK7Q18PE1 504 aa17.98■□□□□ 0.47
SEC13-211ENST00000431352 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
SEC13-211ENST00000431352 C8orf58Q8NAV2 365 aa17.98■□□□□ 0.47
SEC13-211ENST00000431352 CCDC85AQ96PX6 553 aaPredicted RBP17.98■□□□□ 0.47
SEC13-211ENST00000431352 POLLQ9UGP5 575 aa17.98■□□□□ 0.47
SEC13-211ENST00000431352 CNOT7Q9UIV1 285 aaKnown RBP17.98■□□□□ 0.47
SEC13-211ENST00000431352 H7C1D1 291 aa17.97■□□□□ 0.47
SEC13-211ENST00000431352 PSMD14O00487 310 aa17.97■□□□□ 0.47
SEC13-211ENST00000431352 HSPA8P11142 646 aaKnown RBP17.97■□□□□ 0.47
SEC13-211ENST00000431352 ECE1P42892 770 aa17.97■□□□□ 0.47
SEC13-211ENST00000431352 MAP2K1Q02750 393 aaPredicted RBP17.97■□□□□ 0.47
SEC13-211ENST00000431352 TRIM28Q13263 835 aaKnown RBP17.97■□□□□ 0.47
SEC13-211ENST00000431352 ZBTB38Q8NAP3 1195 aaPredicted RBP17.97■□□□□ 0.47
SEC13-211ENST00000431352 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
SEC13-211ENST00000431352 TLL2Q9Y6L7 1015 aa17.97■□□□□ 0.47
SEC13-211ENST00000431352 ECE2O60344 883 aa17.96■□□□□ 0.47
SEC13-211ENST00000431352 RPS8P62241 208 aaKnown RBP17.96■□□□□ 0.47
SEC13-211ENST00000431352 THSD7BQ9C0I4 1608 aa17.96■□□□□ 0.47
SEC13-211ENST00000431352 AOC2O75106 756 aa17.95■□□□□ 0.46
SEC13-211ENST00000431352 SAMD7Q7Z3H4 446 aa17.95■□□□□ 0.46
SEC13-211ENST00000431352 EYA3Q99504 573 aa17.95■□□□□ 0.46
SEC13-211ENST00000431352 BEGAINQ9BUH8 593 aa17.95■□□□□ 0.46
SEC13-211ENST00000431352 KCNQ5Q9NR82 932 aa17.95■□□□□ 0.46
SEC13-211ENST00000431352 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
SEC13-211ENST00000431352 RTL9Q8NET4 1388 aa17.94■□□□□ 0.46
SEC13-211ENST00000431352 UFL1O94874 794 aa17.94■□□□□ 0.46
SEC13-211ENST00000431352 DDX58O95786 925 aaKnown RBP17.94■□□□□ 0.46
SEC13-211ENST00000431352 TBC1D10BQ4KMP7 808 aaPredicted RBP17.94■□□□□ 0.46
SEC13-211ENST00000431352 RBM26Q5T8P6 1007 aaKnown RBP17.94■□□□□ 0.46
SEC13-211ENST00000431352 DLK2Q6UY11 383 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms