RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 CEP350Q5VT06 3117 aa22.06■■□□□ 1.12
CTDSP1-203ENST00000431127 CCDC152Q4G0S7 254 aa22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 SLC4A10Q6U841 1118 aa22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 JARID2Q92833 1246 aaPredicted RBP22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 ATP6V0A2Q9Y487 856 aa22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 DDX60Q8IY21 1712 aaKnown RBP22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 CACNA1SQ13698 1873 aa22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 ZC3H4Q9UPT8 1303 aaKnown RBP22.05■■□□□ 1.12
CTDSP1-203ENST00000431127 ALDH1L1O75891 902 aa22.04■■□□□ 1.12
CTDSP1-203ENST00000431127 BRPF1P55201 1214 aaPredicted RBP22.04■■□□□ 1.12
CTDSP1-203ENST00000431127 FKBP4Q02790 459 aaKnown RBP eCLIP22.04■■□□□ 1.122e-6■■■■□ 25.6
CTDSP1-203ENST00000431127 OLFM4Q6UX06 510 aa22.04■■□□□ 1.12
CTDSP1-203ENST00000431127 TOMM70O94826 608 aa22.03■■□□□ 1.12
CTDSP1-203ENST00000431127 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
CTDSP1-203ENST00000431127 SP8Q8IXZ3 490 aa22.03■■□□□ 1.12
CTDSP1-203ENST00000431127 SRCIN1Q9C0H9 1055 aa22.03■■□□□ 1.12
CTDSP1-203ENST00000431127 FER1L6Q2WGJ9 1857 aa22.03■■□□□ 1.12
CTDSP1-203ENST00000431127 LAMB2P55268 1798 aa22.02■■□□□ 1.12
CTDSP1-203ENST00000431127 CTSWP56202 376 aa22.02■■□□□ 1.12
CTDSP1-203ENST00000431127 PSMD1Q99460 953 aa22.02■■□□□ 1.12
CTDSP1-203ENST00000431127 NMRK2Q9NPI5 230 aa22.02■■□□□ 1.12
CTDSP1-203ENST00000431127 PRELPP51888 382 aa22.01■■□□□ 1.11
CTDSP1-203ENST00000431127 PLA2G12BQ9BX93 195 aa22.01■■□□□ 1.11
CTDSP1-203ENST00000431127 SBF1O95248 1867 aa22■■□□□ 1.11
CTDSP1-203ENST00000431127 CASP7P55210 303 aa22■■□□□ 1.11
CTDSP1-203ENST00000431127 RPS8P62241 208 aaKnown RBP22■■□□□ 1.11
CTDSP1-203ENST00000431127 GRM8O00222 908 aa21.99■■□□□ 1.11
CTDSP1-203ENST00000431127 TTLL11Q8NHH1 800 aa21.99■■□□□ 1.11
CTDSP1-203ENST00000431127 CELF1Q92879 486 aaKnown RBP21.99■■□□□ 1.11
CTDSP1-203ENST00000431127 C9orf78Q9NZ63 289 aaPredicted RBP21.99■■□□□ 1.11
CTDSP1-203ENST00000431127 KIF16BQ96L93 1317 aa21.99■■□□□ 1.11
CTDSP1-203ENST00000431127 SNED1Q8TER0 1413 aa21.98■■□□□ 1.11
CTDSP1-203ENST00000431127 API5Q9BZZ5 524 aaKnown RBP21.98■■□□□ 1.11
CTDSP1-203ENST00000431127 ZNF277Q9NRM2 450 aaPredicted RBP21.98■■□□□ 1.11
CTDSP1-203ENST00000431127 NOB1Q9ULX3 412 aaKnown RBP21.98■■□□□ 1.11
CTDSP1-203ENST00000431127 IFFO2Q5TF58 517 aa21.97■■□□□ 1.11
CTDSP1-203ENST00000431127 SUPT20HQ8NEM7 779 aa21.97■■□□□ 1.11
CTDSP1-203ENST00000431127 CDC5LQ99459 802 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-203ENST00000431127 SEC31BQ9NQW1 1179 aa21.97■■□□□ 1.11
CTDSP1-203ENST00000431127 RTL9Q8NET4 1388 aa21.97■■□□□ 1.11
CTDSP1-203ENST00000431127 IARSP41252 1262 aaKnown RBP21.96■■□□□ 1.11
CTDSP1-203ENST00000431127 DPP8Q6V1X1 898 aaPredicted RBP21.96■■□□□ 1.11
CTDSP1-203ENST00000431127 MPNDQ8N594 471 aa21.96■■□□□ 1.11
CTDSP1-203ENST00000431127 ARHGAP45Q92619 1136 aa21.96■■□□□ 1.11
CTDSP1-203ENST00000431127 CCDC85AQ96PX6 553 aaPredicted RBP21.96■■□□□ 1.11
CTDSP1-203ENST00000431127 VPS33BQ9H267 617 aa21.96■■□□□ 1.11
CTDSP1-203ENST00000431127 KDM2BQ8NHM5 1336 aa21.96■■□□□ 1.11
CTDSP1-203ENST00000431127 IPO8O15397 1037 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-203ENST00000431127 CSF1RP07333 972 aa21.95■■□□□ 1.1
CTDSP1-203ENST00000431127 DPY19L2Q6NUT2 758 aa21.95■■□□□ 1.1
CTDSP1-203ENST00000431127 ANKRD18AQ8IVF6 992 aa21.95■■□□□ 1.1
CTDSP1-203ENST00000431127 RTFDC1Q9BY42 306 aaPredicted RBP21.95■■□□□ 1.1
CTDSP1-203ENST00000431127 CCT4P50991 539 aaKnown RBP21.94■■□□□ 1.1
CTDSP1-203ENST00000431127 APLP1P51693 650 aa21.94■■□□□ 1.1
CTDSP1-203ENST00000431127 GREM2Q9H772 168 aa21.94■■□□□ 1.1
CTDSP1-203ENST00000431127 RRAGCQ9HB90 399 aa21.94■■□□□ 1.1
CTDSP1-203ENST00000431127 GLTPD2A6NH11 291 aa21.93■■□□□ 1.1
CTDSP1-203ENST00000431127 UTYO14607 1347 aa21.93■■□□□ 1.1
CTDSP1-203ENST00000431127 RBM46Q8TBY0 533 aaKnown RBP21.93■■□□□ 1.1
CTDSP1-203ENST00000431127 JDP2Q8WYK2 163 aa21.93■■□□□ 1.1
CTDSP1-203ENST00000431127 FOXO4P98177 505 aa21.92■■□□□ 1.1
CTDSP1-203ENST00000431127 SLC51AQ86UW1 340 aa21.92■■□□□ 1.1
CTDSP1-203ENST00000431127 C16orf71Q8IYS4 520 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-203ENST00000431127 NSFL1CQ9UNZ2 370 aaKnown RBP21.92■■□□□ 1.1
CTDSP1-203ENST00000431127 CCDC88AQ3V6T2 1871 aa21.92■■□□□ 1.1
CTDSP1-203ENST00000431127 ITGA6P23229 1130 aa21.91■■□□□ 1.1
CTDSP1-203ENST00000431127 LARGE2Q8N3Y3 721 aa21.91■■□□□ 1.1
CTDSP1-203ENST00000431127 MYH3P11055 1940 aa21.9■■□□□ 1.1
CTDSP1-203ENST00000431127 DICER1Q9UPY3 1922 aaKnown RBP21.9■■□□□ 1.1
CTDSP1-203ENST00000431127 TAF1P21675 1872 aa21.9■■□□□ 1.1
CTDSP1-203ENST00000431127 PPIP5K2O43314 1243 aa21.9■■□□□ 1.1
CTDSP1-203ENST00000431127 BCAR3O75815 825 aa21.9■■□□□ 1.1
CTDSP1-203ENST00000431127 IGHMBP2P38935 993 aaKnown RBP21.9■■□□□ 1.1
CTDSP1-203ENST00000431127 BSDC1Q9NW68 430 aaPredicted RBP21.9■■□□□ 1.1
CTDSP1-203ENST00000431127 ANKRD18BA2A2Z9 1011 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 NBPF7P0C2Y1 421 aaPredicted RBP21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 IFIT5Q13325 482 aaKnown RBP21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 FAM161AQ3B820 660 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 LMBR1LQ6UX01 489 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 DNAJC5GQ8N7S2 189 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 PODXL2Q9NZ53 605 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 ANKIB1Q9P2G1 1089 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 LRRC37AA6NMS7 1700 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 TIAM2Q8IVF5 1701 aa21.89■■□□□ 1.09
CTDSP1-203ENST00000431127 FZD9O00144 591 aa21.88■■□□□ 1.09
CTDSP1-203ENST00000431127 GPSM2P81274 684 aa21.88■■□□□ 1.09
CTDSP1-203ENST00000431127 FRAT1Q92837 279 aaPredicted RBP21.88■■□□□ 1.09
CTDSP1-203ENST00000431127 USP44Q9H0E7 712 aa21.88■■□□□ 1.09
CTDSP1-203ENST00000431127 CHMP3Q9Y3E7 222 aa21.88■■□□□ 1.09
CTDSP1-203ENST00000431127 KIAA2012Q0VF49 1180 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 FSTL1Q12841 308 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 AOC3Q16853 763 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 CCDC57Q2TAC2 916 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 ATF7IPQ6VMQ6 1270 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 NIM1KQ8IY84 436 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 SUCLG2Q96I99 432 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 EYA3Q99504 573 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 MPHOSPH8Q99549 860 aa21.87■■□□□ 1.09
CTDSP1-203ENST00000431127 HDAC5Q9UQL6 1122 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms