RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 KRT24Q2M2I5 525 aa17.62■□□□□ 0.41
GCSHP3-201ENST00000431120 DEFB115Q30KQ5 88 aa17.62■□□□□ 0.41
GCSHP3-201ENST00000431120 ADARB2Q9NS39 739 aaKnown RBP17.62■□□□□ 0.41
GCSHP3-201ENST00000431120 AIDAQ96BJ3 306 aa17.61■□□□□ 0.41
GCSHP3-201ENST00000431120 ISCA1Q9BUE6 129 aa17.61■□□□□ 0.41
GCSHP3-201ENST00000431120 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
GCSHP3-201ENST00000431120 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
GCSHP3-201ENST00000431120 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
GCSHP3-201ENST00000431120 GPRC5DQ9NZD1 345 aa17.61■□□□□ 0.41
GCSHP3-201ENST00000431120 HSP90B1P14625 803 aaKnown RBP17.6■□□□□ 0.41
GCSHP3-201ENST00000431120 CXCL9Q07325 125 aa17.6■□□□□ 0.41
GCSHP3-201ENST00000431120 TNIP1Q15025 636 aa17.6■□□□□ 0.41
GCSHP3-201ENST00000431120 SF3B3Q15393 1217 aaKnown RBP17.6■□□□□ 0.41
GCSHP3-201ENST00000431120 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
GCSHP3-201ENST00000431120 CTCFP49711 727 aaPredicted RBP17.59■□□□□ 0.41
GCSHP3-201ENST00000431120 DUSP27Q5VZP5 1158 aa17.59■□□□□ 0.41
GCSHP3-201ENST00000431120 CIAPIN1Q6FI81 312 aa17.59■□□□□ 0.41
GCSHP3-201ENST00000431120 WBP1LQ9NX94 342 aa17.59■□□□□ 0.41
GCSHP3-201ENST00000431120 LTBP1Q14766 1721 aa17.58■□□□□ 0.41
GCSHP3-201ENST00000431120 GNAI1P63096 354 aa17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 MAP2K1Q02750 393 aaPredicted RBP17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 ZC3H15Q8WU90 426 aaKnown RBP17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 MBIPQ9NS73 344 aa17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 ABT1Q9ULW3 272 aaKnown RBP17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 LAMB2P55268 1798 aa17.58■□□□□ 0.4
GCSHP3-201ENST00000431120 FOXN1O15353 648 aa17.57■□□□□ 0.4
GCSHP3-201ENST00000431120 PGAP2Q9UHJ9 254 aa17.57■□□□□ 0.4
GCSHP3-201ENST00000431120 WDR33Q9C0J8 1336 aaKnown RBP17.56■□□□□ 0.4
GCSHP3-201ENST00000431120 ECE1P42892 770 aa17.56■□□□□ 0.4
GCSHP3-201ENST00000431120 FAM89AQ96GI7 184 aa17.56■□□□□ 0.4
GCSHP3-201ENST00000431120 GMPSP49915 693 aaPredicted RBP17.55■□□□□ 0.4
GCSHP3-201ENST00000431120 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
GCSHP3-201ENST00000431120 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
GCSHP3-201ENST00000431120 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 APAF1O14727 1248 aa17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 RIC3Q7Z5B4 369 aa17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 ZBTB38Q8NAP3 1195 aaPredicted RBP17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 DPF2Q92785 391 aa17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 LRRC37AA6NMS7 1700 aa17.54■□□□□ 0.4
GCSHP3-201ENST00000431120 H7C1D1 291 aa17.53■□□□□ 0.4
GCSHP3-201ENST00000431120 CST9Q5W186 159 aa17.53■□□□□ 0.4
GCSHP3-201ENST00000431120 CELF1Q92879 486 aaKnown RBP17.53■□□□□ 0.4
GCSHP3-201ENST00000431120 EYA3Q99504 573 aa17.53■□□□□ 0.4
GCSHP3-201ENST00000431120 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
GCSHP3-201ENST00000431120 TLL2Q9Y6L7 1015 aa17.53■□□□□ 0.4
GCSHP3-201ENST00000431120 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.4
GCSHP3-201ENST00000431120 RAD17O75943 681 aa17.52■□□□□ 0.4
GCSHP3-201ENST00000431120 RPS8P62241 208 aaKnown RBP17.52■□□□□ 0.4
GCSHP3-201ENST00000431120 CCDC191Q8NCU4 936 aa17.52■□□□□ 0.4
GCSHP3-201ENST00000431120 HHIPL1Q96JK4 782 aa17.52■□□□□ 0.4
GCSHP3-201ENST00000431120 CAPNS2Q96L46 248 aa17.52■□□□□ 0.4
GCSHP3-201ENST00000431120 CNOT7Q9UIV1 285 aaKnown RBP17.52■□□□□ 0.4
GCSHP3-201ENST00000431120 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.39
GCSHP3-201ENST00000431120 TRPM7Q96QT4 1865 aa17.52■□□□□ 0.39
GCSHP3-201ENST00000431120 YDJCA8MPS7 323 aa17.51■□□□□ 0.39
GCSHP3-201ENST00000431120 CAPN15O75808 1086 aa17.51■□□□□ 0.39
GCSHP3-201ENST00000431120 DDX58O95786 925 aaKnown RBP17.51■□□□□ 0.39
GCSHP3-201ENST00000431120 RPS12P25398 132 aaKnown RBP17.51■□□□□ 0.39
GCSHP3-201ENST00000431120 MAP2K2P36507 400 aa17.51■□□□□ 0.39
GCSHP3-201ENST00000431120 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
GCSHP3-201ENST00000431120 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
GCSHP3-201ENST00000431120 TRAF5O00463 557 aa17.5■□□□□ 0.39
GCSHP3-201ENST00000431120 BEGAINQ9BUH8 593 aa17.5■□□□□ 0.39
GCSHP3-201ENST00000431120 PODXL2Q9NZ53 605 aa17.5■□□□□ 0.39
GCSHP3-201ENST00000431120 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
GCSHP3-201ENST00000431120 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
GCSHP3-201ENST00000431120 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
GCSHP3-201ENST00000431120 SAPCD2Q86UD0 394 aa17.49■□□□□ 0.39
GCSHP3-201ENST00000431120 GPR101Q96P66 508 aaPredicted RBP17.49■□□□□ 0.39
GCSHP3-201ENST00000431120 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
GCSHP3-201ENST00000431120 POLLQ9UGP5 575 aa17.49■□□□□ 0.39
GCSHP3-201ENST00000431120 TAF1P21675 1872 aa17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 PDE8AO60658 829 aa17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 CELF2O95319 508 aaKnown RBP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 LBX1P52954 281 aa17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 HIRAP54198 1017 aaPredicted RBP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 GPSM2P81274 684 aa17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 FMR1Q06787 632 aaKnown RBP eCLIP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 PAXIP1Q6ZW49 1069 aaPredicted RBP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 MICALL2Q8IY33 904 aa17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 ZC3H12CQ9C0D7 883 aaKnown RBP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
GCSHP3-201ENST00000431120 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 PSMD14O00487 310 aa17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 TRPM4Q8TD43 1214 aa17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 MYD88Q99836 296 aa17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 METTL22Q9BUU2 404 aaPredicted RBP17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 DBNDD1Q9H9R9 158 aa17.47■□□□□ 0.39
GCSHP3-201ENST00000431120 CA12O43570 354 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms