RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 RTFDC1Q9BY42 306 aaPredicted RBP11.7□□□□□ -0.54
HDAC9-211ENST00000430454 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
HDAC9-211ENST00000430454 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
HDAC9-211ENST00000430454 ZNRF3Q9ULT6 936 aa11.7□□□□□ -0.54
HDAC9-211ENST00000430454 GJA3Q9Y6H8 435 aa11.7□□□□□ -0.54
HDAC9-211ENST00000430454 ZNF541Q9H0D2 1346 aa11.69□□□□□ -0.54
HDAC9-211ENST00000430454 EPHX2P34913 555 aa11.69□□□□□ -0.54
HDAC9-211ENST00000430454 TNIP1Q15025 636 aa11.69□□□□□ -0.54
HDAC9-211ENST00000430454 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
HDAC9-211ENST00000430454 EAPPQ56P03 285 aaPredicted RBP11.69□□□□□ -0.54
HDAC9-211ENST00000430454 KSR2Q6VAB6 950 aa11.69□□□□□ -0.54
HDAC9-211ENST00000430454 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
HDAC9-211ENST00000430454 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
HDAC9-211ENST00000430454 EYA3Q99504 573 aa11.69□□□□□ -0.54
HDAC9-211ENST00000430454 METTL22Q9BUU2 404 aaPredicted RBP11.69□□□□□ -0.54
HDAC9-211ENST00000430454 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
HDAC9-211ENST00000430454 SCN4AP35499 1836 aa11.68□□□□□ -0.54
HDAC9-211ENST00000430454 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
HDAC9-211ENST00000430454 CCDC184Q52MB2 194 aa11.68□□□□□ -0.54
HDAC9-211ENST00000430454 DNAJC5GQ8N7S2 189 aa11.68□□□□□ -0.54
HDAC9-211ENST00000430454 MAP3K2Q9Y2U5 619 aa11.68□□□□□ -0.54
HDAC9-211ENST00000430454 G3V3G9 751 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 PDE8AO60658 829 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
HDAC9-211ENST00000430454 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 AOC3Q16853 763 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 RTL5Q5HYW3 569 aaPredicted RBP11.67□□□□□ -0.54
HDAC9-211ENST00000430454 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 NSFL1CQ9UNZ2 370 aaKnown RBP11.67□□□□□ -0.54
HDAC9-211ENST00000430454 SNED1Q8TER0 1413 aa11.67□□□□□ -0.54
HDAC9-211ENST00000430454 CDHR2Q9BYE9 1310 aa11.66□□□□□ -0.54
HDAC9-211ENST00000430454 PI4KAP2A4QPH2 592 aa11.66□□□□□ -0.54
HDAC9-211ENST00000430454 C6orf229H3BNL8 230 aa11.66□□□□□ -0.54
HDAC9-211ENST00000430454 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
HDAC9-211ENST00000430454 USP50Q70EL3 339 aaPredicted RBP11.66□□□□□ -0.54
HDAC9-211ENST00000430454 PI4KAP1Q8N8J0 262 aa11.66□□□□□ -0.54
HDAC9-211ENST00000430454 CDC5LQ99459 802 aaKnown RBP11.66□□□□□ -0.54
HDAC9-211ENST00000430454 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
HDAC9-211ENST00000430454 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
HDAC9-211ENST00000430454 FANCIQ9NVI1 1328 aa11.65□□□□□ -0.54
HDAC9-211ENST00000430454 CIAPIN1Q6FI81 312 aa11.65□□□□□ -0.54
HDAC9-211ENST00000430454 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
HDAC9-211ENST00000430454 ZC3H12CQ9C0D7 883 aaKnown RBP11.65□□□□□ -0.54
HDAC9-211ENST00000430454 ANKIB1Q9P2G1 1089 aa11.65□□□□□ -0.54
HDAC9-211ENST00000430454 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-211ENST00000430454 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
HDAC9-211ENST00000430454 ANKRD18AQ8IVF6 992 aa11.64□□□□□ -0.55
HDAC9-211ENST00000430454 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
HDAC9-211ENST00000430454 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
HDAC9-211ENST00000430454 ADARB2Q9NS39 739 aaKnown RBP11.64□□□□□ -0.55
HDAC9-211ENST00000430454 TMEM88BA6NKF7 163 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 H7C1D1 291 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 CXCL9Q07325 125 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 FLIIQ13045 1269 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 ZNF428Q96B54 188 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 GPRC5DQ9NZD1 345 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 GGA1Q9UJY5 639 aa11.63□□□□□ -0.55
HDAC9-211ENST00000430454 NEURL1BA8MQ27 555 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 CTSWP56202 376 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 GPSM2P81274 684 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 HTRA3P83110 453 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 EXOSC9Q06265 439 aaKnown RBP11.62□□□□□ -0.55
HDAC9-211ENST00000430454 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 LAMB2P55268 1798 aa11.62□□□□□ -0.55
HDAC9-211ENST00000430454 PASKQ96RG2 1323 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 RIMBP2O15034 1052 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 VAMP4O75379 141 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 RAD17O75943 681 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 UFL1O94874 794 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 RPS12P25398 132 aaKnown RBP11.61□□□□□ -0.55
HDAC9-211ENST00000430454 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
HDAC9-211ENST00000430454 GMPSP49915 693 aaPredicted RBP11.61□□□□□ -0.55
HDAC9-211ENST00000430454 SCNN1DP51172 638 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 TBC1D16Q8TBP0 767 aa11.61□□□□□ -0.55
HDAC9-211ENST00000430454 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
HDAC9-211ENST00000430454 XDHP47989 1333 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
HDAC9-211ENST00000430454 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 H7C1W4 665 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
HDAC9-211ENST00000430454 IGKV5-2P06315 115 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 EPS15P42566 896 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 GCKRQ14397 625 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 MAP1SQ66K74 1059 aaPredicted RBP11.6□□□□□ -0.55
HDAC9-211ENST00000430454 UBE3BQ7Z3V4 1068 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 DPF2Q92785 391 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 SEC31BQ9NQW1 1179 aa11.6□□□□□ -0.55
HDAC9-211ENST00000430454 ECE2O60344 883 aa11.59□□□□□ -0.55
HDAC9-211ENST00000430454 CWF19L2Q2TBE0 894 aaKnown RBP11.59□□□□□ -0.55
HDAC9-211ENST00000430454 G2E3Q7L622 706 aa11.59□□□□□ -0.55
HDAC9-211ENST00000430454 TTLL11Q8NHH1 800 aa11.59□□□□□ -0.55
HDAC9-211ENST00000430454 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms