RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CDHR2Q9BYE9 1310 aa19.35■□□□□ 0.69
MSH5-208ENST00000429846 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
MSH5-208ENST00000429846 MBIPQ9NS73 344 aa19.35■□□□□ 0.69
MSH5-208ENST00000429846 ZNRF3Q9ULT6 936 aa19.35■□□□□ 0.69
MSH5-208ENST00000429846 TRPM7Q96QT4 1865 aa19.35■□□□□ 0.69
MSH5-208ENST00000429846 EPS15P42566 896 aa19.34■□□□□ 0.69
MSH5-208ENST00000429846 KIAA2012Q0VF49 1180 aa19.34■□□□□ 0.69
MSH5-208ENST00000429846 DUSP27Q5VZP5 1158 aa19.34■□□□□ 0.69
MSH5-208ENST00000429846 ISCA1Q9BUE6 129 aa19.34■□□□□ 0.69
MSH5-208ENST00000429846 DUOX1Q9NRD9 1551 aa19.34■□□□□ 0.69
MSH5-208ENST00000429846 RASSF10A6NK89 507 aa19.33■□□□□ 0.68
MSH5-208ENST00000429846 ZNF853P0CG23 659 aa19.33■□□□□ 0.68
MSH5-208ENST00000429846 IFT57Q9NWB7 429 aa19.33■□□□□ 0.68
MSH5-208ENST00000429846 GPRC5DQ9NZD1 345 aa19.33■□□□□ 0.68
MSH5-208ENST00000429846 VEGFBP49765 207 aa19.32■□□□□ 0.68
MSH5-208ENST00000429846 GNAI1P63096 354 aa19.32■□□□□ 0.68
MSH5-208ENST00000429846 ADARB2Q9NS39 739 aaKnown RBP19.32■□□□□ 0.68
MSH5-208ENST00000429846 CXCL9Q07325 125 aa19.31■□□□□ 0.68
MSH5-208ENST00000429846 TRIM28Q13263 835 aaKnown RBP19.31■□□□□ 0.68
MSH5-208ENST00000429846 SF3B3Q15393 1217 aaKnown RBP19.31■□□□□ 0.68
MSH5-208ENST00000429846 DEFB115Q30KQ5 88 aa19.31■□□□□ 0.68
MSH5-208ENST00000429846 THSD7BQ9C0I4 1608 aa19.3■□□□□ 0.68
MSH5-208ENST00000429846 GOLGA2Q08379 1002 aa19.3■□□□□ 0.68
MSH5-208ENST00000429846 TNIP1Q15025 636 aa19.3■□□□□ 0.68
MSH5-208ENST00000429846 CIAPIN1Q6FI81 312 aa19.3■□□□□ 0.68
MSH5-208ENST00000429846 AIDAQ96BJ3 306 aa19.3■□□□□ 0.68
MSH5-208ENST00000429846 FAM89AQ96GI7 184 aa19.3■□□□□ 0.68
MSH5-208ENST00000429846 CHMP4AQ9BY43 222 aa19.3■□□□□ 0.68
MSH5-208ENST00000429846 ABT1Q9ULW3 272 aaKnown RBP19.3■□□□□ 0.68
MSH5-208ENST00000429846 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
MSH5-208ENST00000429846 APAF1O14727 1248 aa19.29■□□□□ 0.68
MSH5-208ENST00000429846 HSP90B1P14625 803 aaKnown RBP19.29■□□□□ 0.68
MSH5-208ENST00000429846 FOXN1O15353 648 aa19.28■□□□□ 0.68
MSH5-208ENST00000429846 GMPSP49915 693 aaPredicted RBP19.27■□□□□ 0.68
MSH5-208ENST00000429846 RIC3Q7Z5B4 369 aa19.27■□□□□ 0.68
MSH5-208ENST00000429846 PRDM10Q9NQV6 1147 aa19.27■□□□□ 0.68
MSH5-208ENST00000429846 WBP1LQ9NX94 342 aa19.27■□□□□ 0.68
MSH5-208ENST00000429846 IRS4O14654 1257 aaPredicted RBP19.26■□□□□ 0.67
MSH5-208ENST00000429846 CTCFP49711 727 aaPredicted RBP19.26■□□□□ 0.67
MSH5-208ENST00000429846 ZBTB38Q8NAP3 1195 aaPredicted RBP19.26■□□□□ 0.67
MSH5-208ENST00000429846 ZC3H15Q8WU90 426 aaKnown RBP19.26■□□□□ 0.67
MSH5-208ENST00000429846 CELF1Q92879 486 aaKnown RBP19.26■□□□□ 0.67
MSH5-208ENST00000429846 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
MSH5-208ENST00000429846 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
MSH5-208ENST00000429846 RAD17O75943 681 aa19.25■□□□□ 0.67
MSH5-208ENST00000429846 MAP2K1Q02750 393 aaPredicted RBP19.25■□□□□ 0.67
MSH5-208ENST00000429846 WASHC4Q2M389 1173 aa19.25■□□□□ 0.67
MSH5-208ENST00000429846 NSFL1CQ9UNZ2 370 aaKnown RBP19.25■□□□□ 0.67
MSH5-208ENST00000429846 COL4A1P02462 1669 aa19.24■□□□□ 0.67
MSH5-208ENST00000429846 YDJCA8MPS7 323 aa19.24■□□□□ 0.67
MSH5-208ENST00000429846 ECE1P42892 770 aa19.24■□□□□ 0.67
MSH5-208ENST00000429846 CCDC191Q8NCU4 936 aa19.24■□□□□ 0.67
MSH5-208ENST00000429846 ZNF428Q96B54 188 aa19.24■□□□□ 0.67
MSH5-208ENST00000429846 EYA3Q99504 573 aa19.24■□□□□ 0.67
MSH5-208ENST00000429846 PHAXQ9H814 394 aaKnown RBP19.24■□□□□ 0.67
MSH5-208ENST00000429846 PGAP2Q9UHJ9 254 aa19.24■□□□□ 0.67
MSH5-208ENST00000429846 DDX58O95786 925 aaKnown RBP19.23■□□□□ 0.67
MSH5-208ENST00000429846 RPS8P62241 208 aaKnown RBP19.23■□□□□ 0.67
MSH5-208ENST00000429846 RTL5Q5HYW3 569 aaPredicted RBP19.23■□□□□ 0.67
MSH5-208ENST00000429846 CCDC30Q5VVM6 783 aa19.23■□□□□ 0.67
MSH5-208ENST00000429846 TLL2Q9Y6L7 1015 aa19.23■□□□□ 0.67
MSH5-208ENST00000429846 TRAF5O00463 557 aa19.22■□□□□ 0.67
MSH5-208ENST00000429846 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
MSH5-208ENST00000429846 CAPN15O75808 1086 aa19.22■□□□□ 0.67
MSH5-208ENST00000429846 PCCAP05165 728 aaPredicted RBP19.22■□□□□ 0.67
MSH5-208ENST00000429846 CST9Q5W186 159 aa19.22■□□□□ 0.67
MSH5-208ENST00000429846 DPF2Q92785 391 aa19.22■□□□□ 0.67
MSH5-208ENST00000429846 C6orf229H3BNL8 230 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 H7C1D1 291 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 GPSM2P81274 684 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 FMR1Q06787 632 aaKnown RBP eCLIP19.21■□□□□ 0.67
MSH5-208ENST00000429846 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 MYD88Q99836 296 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 PODXL2Q9NZ53 605 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 POLLQ9UGP5 575 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 CNOT7Q9UIV1 285 aaKnown RBP19.21■□□□□ 0.67
MSH5-208ENST00000429846 MYH3P11055 1940 aa19.21■□□□□ 0.67
MSH5-208ENST00000429846 PDE8AO60658 829 aa19.2■□□□□ 0.66
MSH5-208ENST00000429846 RPS12P25398 132 aaKnown RBP19.2■□□□□ 0.66
MSH5-208ENST00000429846 CCDC152Q4G0S7 254 aa19.2■□□□□ 0.66
MSH5-208ENST00000429846 PAXIP1Q6ZW49 1069 aaPredicted RBP19.2■□□□□ 0.66
MSH5-208ENST00000429846 MICALL2Q8IY33 904 aa19.2■□□□□ 0.66
MSH5-208ENST00000429846 C8orf58Q8NAV2 365 aa19.2■□□□□ 0.66
MSH5-208ENST00000429846 HHIPL1Q96JK4 782 aa19.2■□□□□ 0.66
MSH5-208ENST00000429846 METTL22Q9BUU2 404 aaPredicted RBP19.2■□□□□ 0.66
MSH5-208ENST00000429846 DBNDD1Q9H9R9 158 aa19.2■□□□□ 0.66
MSH5-208ENST00000429846 CWC25Q9NXE8 425 aaPredicted RBP19.2■□□□□ 0.66
MSH5-208ENST00000429846 PSMD14O00487 310 aa19.19■□□□□ 0.66
MSH5-208ENST00000429846 HIRAP54198 1017 aaPredicted RBP19.19■□□□□ 0.66
MSH5-208ENST00000429846 CCDC27Q2M243 656 aa19.19■□□□□ 0.66
MSH5-208ENST00000429846 CDC37L1Q7L3B6 337 aa19.19■□□□□ 0.66
MSH5-208ENST00000429846 TBC1D16Q8TBP0 767 aa19.19■□□□□ 0.66
MSH5-208ENST00000429846 TRPM4Q8TD43 1214 aa19.19■□□□□ 0.66
MSH5-208ENST00000429846 PSME4Q14997 1843 aa19.18■□□□□ 0.66
MSH5-208ENST00000429846 ECE2O60344 883 aa19.18■□□□□ 0.66
MSH5-208ENST00000429846 CELF2O95319 508 aaKnown RBP19.18■□□□□ 0.66
MSH5-208ENST00000429846 SAPCD2Q86UD0 394 aa19.18■□□□□ 0.66
MSH5-208ENST00000429846 GLIS2Q9BZE0 524 aaPredicted RBP19.18■□□□□ 0.66
MSH5-208ENST00000429846 SCN9AQ15858 1988 aa19.17■□□□□ 0.66
MSH5-208ENST00000429846 RIMBP2O15034 1052 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms