RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 CARMIL3Q8ND23 1372 aa15.69■□□□□ 0.1
HMGB3P4-201ENST00000428776 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
HMGB3P4-201ENST00000428776 NBPF5PQ86XG9 351 aaPredicted RBP15.68■□□□□ 0.1
HMGB3P4-201ENST00000428776 PLEKHM2Q8IWE5 1019 aa15.68■□□□□ 0.1
HMGB3P4-201ENST00000428776 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
HMGB3P4-201ENST00000428776 KLHDC4Q8TBB5 520 aa15.68■□□□□ 0.1
HMGB3P4-201ENST00000428776 CIAO1O76071 339 aa15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 GTF2E1P29083 439 aaPredicted RBP15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 NFIXQ14938 502 aa15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 ERFEQ4G0M1 354 aa15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 CLASRPQ8N2M8 674 aaKnown RBP15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 SIL1Q9H173 461 aa15.67■□□□□ 0.1
HMGB3P4-201ENST00000428776 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 TAF1P21675 1872 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 ANKRD18BA2A2Z9 1011 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 SASH1O94885 1247 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 COL23A1Q86Y22 540 aaPredicted RBP15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 OSBPL3Q9H4L5 887 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 GREM2Q9H772 168 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 IL1RAPL2Q9NP60 686 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 STK32BQ9NY57 414 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 SALL3Q9BXA9 1300 aa15.66■□□□□ 0.1
HMGB3P4-201ENST00000428776 NRXN2Q9P2S2 1712 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 EYA2O00167 538 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 ITGA6P23229 1130 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 TM4SF1P30408 202 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 IL15P40933 162 aaPredicted RBP15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 CCDC152Q4G0S7 254 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 TAF7LQ5H9L4 462 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 NLGN1Q8N2Q7 840 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 BCL11AQ9H165 835 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 STAP2Q9UGK3 403 aa15.65■□□□□ 0.1
HMGB3P4-201ENST00000428776 MX1P20591 662 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 PDE1AP54750 535 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 SF3B3Q15393 1217 aaKnown RBP15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 RIC1Q4ADV7 1423 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 BMP2KLQ5H9B9 411 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 ATG9AQ7Z3C6 839 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 ZNF594Q96JF6 807 aaPredicted RBP15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 CCDC85AQ96PX6 553 aaPredicted RBP15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 LRP5O75197 1615 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 AOX1Q06278 1338 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
HMGB3P4-201ENST00000428776 A0A1B0GUL6 1792 aa15.63■□□□□ 0.09
HMGB3P4-201ENST00000428776 MSH5O43196 834 aa15.63■□□□□ 0.09
HMGB3P4-201ENST00000428776 TTC22Q5TAA0 569 aa15.63■□□□□ 0.09
HMGB3P4-201ENST00000428776 DEFB132Q7Z7B7 95 aa15.63■□□□□ 0.09
HMGB3P4-201ENST00000428776 TNRC6CQ9HCJ0 1690 aaKnown RBP15.63■□□□□ 0.09
HMGB3P4-201ENST00000428776 NPHP1O15259 732 aa15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 IFIT2P09913 472 aaKnown RBP15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 TFCP2Q12800 502 aa15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 GPR108Q9NPR9 543 aa15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
HMGB3P4-201ENST00000428776 SERPINB2P05120 415 aa15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 LRRC24Q50LG9 513 aa15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 LDHAL6AQ6ZMR3 332 aa15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 AACSQ86V21 672 aa15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 GPATCH3Q96I76 525 aa15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 PUS3Q9BZE2 481 aaKnown RBP15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 TTC41PQ6P2S7 1318 aa15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
HMGB3P4-201ENST00000428776 POLRMTO00411 1230 aaKnown RBP15.6■□□□□ 0.09
HMGB3P4-201ENST00000428776 C8orf34Q49A92 452 aa15.6■□□□□ 0.09
HMGB3P4-201ENST00000428776 EAF2Q96CJ1 260 aaPredicted RBP15.6■□□□□ 0.09
HMGB3P4-201ENST00000428776 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
HMGB3P4-201ENST00000428776 CEP126Q9P2H0 1117 aa15.6■□□□□ 0.09
HMGB3P4-201ENST00000428776 RIPOR2Q9Y4F9 1068 aa15.6■□□□□ 0.09
HMGB3P4-201ENST00000428776 ARAP2Q8WZ64 1704 aa15.6■□□□□ 0.09
HMGB3P4-201ENST00000428776 ST5P78524 1137 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 DDR1Q08345 913 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 TNNI3KQ59H18 835 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 PRR5LQ6MZQ0 368 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 TSHZ2Q9NRE2 1034 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 CNNM1Q9NRU3 951 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 AKAP2Q9Y2D5 859 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 FPGT-TNNI3KV9GXZ4 949 aa15.59■□□□□ 0.09
HMGB3P4-201ENST00000428776 GSPT1P15170 499 aaKnown RBP15.58■□□□□ 0.08
HMGB3P4-201ENST00000428776 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
HMGB3P4-201ENST00000428776 C3orf67Q6ZVT6 689 aa15.58■□□□□ 0.08
HMGB3P4-201ENST00000428776 MPHOSPH8Q99549 860 aa15.58■□□□□ 0.08
HMGB3P4-201ENST00000428776 SEC31BQ9NQW1 1179 aa15.58■□□□□ 0.08
HMGB3P4-201ENST00000428776 ECHDC1Q9NTX5 307 aa15.58■□□□□ 0.08
HMGB3P4-201ENST00000428776 MROH5Q6ZUA9 1318 aa15.58■□□□□ 0.08
HMGB3P4-201ENST00000428776 ERC2O15083 957 aa15.57■□□□□ 0.08
HMGB3P4-201ENST00000428776 CCDC8Q9H0W5 538 aaPredicted RBP15.57■□□□□ 0.08
HMGB3P4-201ENST00000428776 ZNF609O15014 1411 aa15.57■□□□□ 0.08
HMGB3P4-201ENST00000428776 GLRX3O76003 335 aaKnown RBP15.56■□□□□ 0.08
HMGB3P4-201ENST00000428776 METTL24Q5JXM2 366 aa15.56■□□□□ 0.08
HMGB3P4-201ENST00000428776 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
HMGB3P4-201ENST00000428776 CCDC24Q8N4L8 307 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms