RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
SMC1A-203ENST00000428014 TMX4Q9H1E5 349 aaPredicted RBP11.68□□□□□ -0.54
SMC1A-203ENST00000428014 GPBP1L1Q9HC44 474 aaPredicted RBP11.68□□□□□ -0.54
SMC1A-203ENST00000428014 ATP6V0A2Q9Y487 856 aa11.68□□□□□ -0.54
SMC1A-203ENST00000428014 PTPRCP08575 1304 aa11.67□□□□□ -0.54
SMC1A-203ENST00000428014 GLTPD2A6NH11 291 aa11.67□□□□□ -0.54
SMC1A-203ENST00000428014 C21orf2O43822 256 aa11.67□□□□□ -0.54
SMC1A-203ENST00000428014 GRAPQ13588 217 aa11.67□□□□□ -0.54
SMC1A-203ENST00000428014 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
SMC1A-203ENST00000428014 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
SMC1A-203ENST00000428014 GRAPLQ8TC17 118 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-203ENST00000428014 RNF181Q9P0P0 153 aa11.67□□□□□ -0.54
SMC1A-203ENST00000428014 LRRC37AA6NMS7 1700 aa11.66□□□□□ -0.54
SMC1A-203ENST00000428014 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
SMC1A-203ENST00000428014 PDE8AO60658 829 aa11.66□□□□□ -0.54
SMC1A-203ENST00000428014 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
SMC1A-203ENST00000428014 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
SMC1A-203ENST00000428014 DNAAF4Q8WXU2 420 aa11.66□□□□□ -0.54
SMC1A-203ENST00000428014 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
SMC1A-203ENST00000428014 ABCC4O15439 1325 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 NEURL1BA8MQ27 555 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 H7C1W4 665 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.54
SMC1A-203ENST00000428014 ALDH1L1O75891 902 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 IGKV5-2P06315 115 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 MIER1Q8N108 512 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
SMC1A-203ENST00000428014 WDR90Q96KV7 1748 aa11.65□□□□□ -0.54
SMC1A-203ENST00000428014 FZD9O00144 591 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 PPEF1O14829 653 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-203ENST00000428014 TOMM70O94826 608 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-203ENST00000428014 GCKRQ14397 625 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-203ENST00000428014 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 MYD88Q99836 296 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 PODXL2Q9NZ53 605 aa11.64□□□□□ -0.55
SMC1A-203ENST00000428014 FAM177BA6PVY3 158 aa11.63□□□□□ -0.55
SMC1A-203ENST00000428014 ATP5J2-PTCD1G3V325 749 aa11.63□□□□□ -0.55
SMC1A-203ENST00000428014 KIF3CO14782 793 aa11.63□□□□□ -0.55
SMC1A-203ENST00000428014 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
SMC1A-203ENST00000428014 PRELPP51888 382 aa11.63□□□□□ -0.55
SMC1A-203ENST00000428014 C1QTNF8P60827 252 aa11.63□□□□□ -0.55
SMC1A-203ENST00000428014 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
SMC1A-203ENST00000428014 CCDC88AQ3V6T2 1871 aa11.63□□□□□ -0.55
SMC1A-203ENST00000428014 TIAM2Q8IVF5 1701 aa11.63□□□□□ -0.55
SMC1A-203ENST00000428014 UTYO14607 1347 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 MYH3P11055 1940 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 CSF1RP07333 972 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-203ENST00000428014 VEGFAP15692 232 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-203ENST00000428014 CASP7P55210 303 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 RPS8P62241 208 aaKnown RBP11.62□□□□□ -0.55
SMC1A-203ENST00000428014 RASSF7Q02833 373 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 FSTL1Q12841 308 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 BEND3Q5T5X7 828 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 G2E3Q7L622 706 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 ARHGAP45Q92619 1136 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
SMC1A-203ENST00000428014 SCN4AP35499 1836 aa11.62□□□□□ -0.55
SMC1A-203ENST00000428014 CACNA1SQ13698 1873 aa11.61□□□□□ -0.55
SMC1A-203ENST00000428014 KIAA2012Q0VF49 1180 aa11.61□□□□□ -0.55
SMC1A-203ENST00000428014 GPC2Q8N158 579 aa11.61□□□□□ -0.55
SMC1A-203ENST00000428014 SYNE4Q8N205 404 aa11.61□□□□□ -0.55
SMC1A-203ENST00000428014 JDP2Q8WYK2 163 aa11.61□□□□□ -0.55
SMC1A-203ENST00000428014 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
SMC1A-203ENST00000428014 ZNF609O15014 1411 aa11.6□□□□□ -0.55
SMC1A-203ENST00000428014 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
SMC1A-203ENST00000428014 MMP14P50281 582 aa11.6□□□□□ -0.55
SMC1A-203ENST00000428014 CTSWP56202 376 aa11.6□□□□□ -0.55
SMC1A-203ENST00000428014 MPNDQ8N594 471 aa11.6□□□□□ -0.55
SMC1A-203ENST00000428014 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
SMC1A-203ENST00000428014 TTLL11Q8NHH1 800 aa11.6□□□□□ -0.55
SMC1A-203ENST00000428014 HDAC5Q9UQL6 1122 aa11.6□□□□□ -0.55
SMC1A-203ENST00000428014 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
SMC1A-203ENST00000428014 DPP8Q6V1X1 898 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-203ENST00000428014 EYA3Q99504 573 aa11.59□□□□□ -0.55
SMC1A-203ENST00000428014 BSDC1Q9NW68 430 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-203ENST00000428014 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
SMC1A-203ENST00000428014 KIF16BQ96L93 1317 aa11.59□□□□□ -0.55
SMC1A-203ENST00000428014 GRM8O00222 908 aa11.58□□□□□ -0.56
SMC1A-203ENST00000428014 SSH1Q8WYL5 1049 aa11.58□□□□□ -0.56
SMC1A-203ENST00000428014 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
SMC1A-203ENST00000428014 CWF19L2Q2TBE0 894 aaKnown RBP11.57□□□□□ -0.56
SMC1A-203ENST00000428014 PNMA8AQ86V59 439 aaPredicted RBP11.57□□□□□ -0.56
SMC1A-203ENST00000428014 ANKRD18AQ8IVF6 992 aa11.57□□□□□ -0.56
SMC1A-203ENST00000428014 CELF1Q92879 486 aaKnown RBP11.57□□□□□ -0.56
SMC1A-203ENST00000428014 ZNRF3Q9ULT6 936 aa11.57□□□□□ -0.56
SMC1A-203ENST00000428014 DUOX1Q9NRD9 1551 aa11.57□□□□□ -0.56
SMC1A-203ENST00000428014 XDHP47989 1333 aa11.57□□□□□ -0.56
SMC1A-203ENST00000428014 EIF6P56537 245 aaKnown RBP11.56□□□□□ -0.56
SMC1A-203ENST00000428014 RABL6Q3YEC7 729 aaPredicted RBP11.56□□□□□ -0.56
SMC1A-203ENST00000428014 C15orf52Q6ZUT6 534 aaKnown RBP11.56□□□□□ -0.56
SMC1A-203ENST00000428014 UBE3BQ7Z3V4 1068 aa11.56□□□□□ -0.56
SMC1A-203ENST00000428014 NIM1KQ8IY84 436 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms