RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 DNAJC5GQ8N7S2 189 aa23.7■■□□□ 1.38
PSPC1-202ENST00000427943 SPEF2Q9C093 1822 aa23.7■■□□□ 1.38
PSPC1-202ENST00000427943 DDX58O95786 925 aaKnown RBP23.69■■□□□ 1.38
PSPC1-202ENST00000427943 EIF6P56537 245 aaKnown RBP23.69■■□□□ 1.38
PSPC1-202ENST00000427943 DPP8Q6V1X1 898 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-202ENST00000427943 SP8Q8IXZ3 490 aa23.69■■□□□ 1.38
PSPC1-202ENST00000427943 STK31Q9BXU1 1019 aa23.69■■□□□ 1.38
PSPC1-202ENST00000427943 CHMP4AQ9BY43 222 aa23.69■■□□□ 1.38
PSPC1-202ENST00000427943 TAF1DQ9H5J8 278 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-202ENST00000427943 GJA3Q9Y6H8 435 aa23.69■■□□□ 1.38
PSPC1-202ENST00000427943 SF3B3Q15393 1217 aaKnown RBP23.68■■□□□ 1.38
PSPC1-202ENST00000427943 NCBP3Q53F19 620 aaKnown RBP23.68■■□□□ 1.38
PSPC1-202ENST00000427943 CHADLQ6NUI6 762 aa23.68■■□□□ 1.38
PSPC1-202ENST00000427943 NIM1KQ8IY84 436 aa23.68■■□□□ 1.38
PSPC1-202ENST00000427943 GPC2Q8N158 579 aa23.68■■□□□ 1.38
PSPC1-202ENST00000427943 METTL22Q9BUU2 404 aaPredicted RBP23.68■■□□□ 1.38
PSPC1-202ENST00000427943 HACL1Q9UJ83 578 aa23.68■■□□□ 1.38
PSPC1-202ENST00000427943 MAP3K2Q9Y2U5 619 aa23.68■■□□□ 1.38
PSPC1-202ENST00000427943 EAPPQ56P03 285 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-202ENST00000427943 MPNDQ8N594 471 aa23.67■■□□□ 1.38
PSPC1-202ENST00000427943 ZBTB38Q8NAP3 1195 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-202ENST00000427943 JARID2Q92833 1246 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-202ENST00000427943 CELF1Q92879 486 aaKnown RBP23.67■■□□□ 1.38
PSPC1-202ENST00000427943 CCDC191Q8NCU4 936 aa23.66■■□□□ 1.38
PSPC1-202ENST00000427943 SUPT20HQ8NEM7 779 aa23.66■■□□□ 1.38
PSPC1-202ENST00000427943 RTFDC1Q9BY42 306 aaPredicted RBP23.66■■□□□ 1.38
PSPC1-202ENST00000427943 CWC25Q9NXE8 425 aaPredicted RBP23.66■■□□□ 1.38
PSPC1-202ENST00000427943 PI4KAP2A4QPH2 592 aa23.65■■□□□ 1.38
PSPC1-202ENST00000427943 EPHX2P34913 555 aa23.65■■□□□ 1.38
PSPC1-202ENST00000427943 G2E3Q7L622 706 aa23.65■■□□□ 1.38
PSPC1-202ENST00000427943 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
PSPC1-202ENST00000427943 PI4KAP1Q8N8J0 262 aa23.65■■□□□ 1.38
PSPC1-202ENST00000427943 PCCAP05165 728 aaPredicted RBP23.64■■□□□ 1.37
PSPC1-202ENST00000427943 KSR2Q6VAB6 950 aa23.64■■□□□ 1.37
PSPC1-202ENST00000427943 TMC4Q7Z404 712 aa23.64■■□□□ 1.37
PSPC1-202ENST00000427943 LDHDQ86WU2 507 aa23.64■■□□□ 1.37
PSPC1-202ENST00000427943 SLC4A2P04920 1241 aa23.63■■□□□ 1.37
PSPC1-202ENST00000427943 KLRG1Q96E93 195 aa23.63■■□□□ 1.37
PSPC1-202ENST00000427943 IGKV5-2P06315 115 aa23.62■■□□□ 1.37
PSPC1-202ENST00000427943 VPS33BQ9H267 617 aa23.62■■□□□ 1.37
PSPC1-202ENST00000427943 SPINK5Q9NQ38 1064 aaPredicted RBP23.62■■□□□ 1.37
PSPC1-202ENST00000427943 EXOSC9Q06265 439 aaKnown RBP23.61■■□□□ 1.37
PSPC1-202ENST00000427943 KIAA2012Q0VF49 1180 aa23.61■■□□□ 1.37
PSPC1-202ENST00000427943 CCDC85AQ96PX6 553 aaPredicted RBP23.61■■□□□ 1.37
PSPC1-202ENST00000427943 SEC31BQ9NQW1 1179 aa23.61■■□□□ 1.37
PSPC1-202ENST00000427943 CLEC11AQ9Y240 323 aa23.61■■□□□ 1.37
PSPC1-202ENST00000427943 PDE8AO60658 829 aa23.6■■□□□ 1.37
PSPC1-202ENST00000427943 LMOD1P29536 600 aaPredicted RBP23.6■■□□□ 1.37
PSPC1-202ENST00000427943 SCNN1DP51172 638 aa23.6■■□□□ 1.37
PSPC1-202ENST00000427943 CWF19L2Q2TBE0 894 aaKnown RBP23.6■■□□□ 1.37
PSPC1-202ENST00000427943 ZNRF3Q9ULT6 936 aa23.6■■□□□ 1.37
PSPC1-202ENST00000427943 HSP90B1P14625 803 aaKnown RBP23.59■■□□□ 1.37
PSPC1-202ENST00000427943 NEXNQ0ZGT2 675 aa23.59■■□□□ 1.37
PSPC1-202ENST00000427943 FLIIQ13045 1269 aa23.59■■□□□ 1.37
PSPC1-202ENST00000427943 NSFL1CQ9UNZ2 370 aaKnown RBP23.59■■□□□ 1.37
PSPC1-202ENST00000427943 VAMP4O75379 141 aa23.58■■□□□ 1.37
PSPC1-202ENST00000427943 EPS15P42566 896 aa23.58■■□□□ 1.37
PSPC1-202ENST00000427943 RPS8P62241 208 aaKnown RBP23.58■■□□□ 1.37
PSPC1-202ENST00000427943 GPSM2P81274 684 aa23.58■■□□□ 1.37
PSPC1-202ENST00000427943 CXCL9Q07325 125 aa23.58■■□□□ 1.37
PSPC1-202ENST00000427943 PNMA8AQ86V59 439 aaPredicted RBP23.58■■□□□ 1.37
PSPC1-202ENST00000427943 CDHR2Q9BYE9 1310 aa23.58■■□□□ 1.36
PSPC1-202ENST00000427943 NEURL1BA8MQ27 555 aa23.57■■□□□ 1.36
PSPC1-202ENST00000427943 CCDC152Q4G0S7 254 aa23.57■■□□□ 1.36
PSPC1-202ENST00000427943 PASKQ96RG2 1323 aa23.57■■□□□ 1.36
PSPC1-202ENST00000427943 FKBP5Q13451 457 aaPredicted RBP23.56■■□□□ 1.36
PSPC1-202ENST00000427943 SCN9AQ15858 1988 aa23.55■■□□□ 1.36
PSPC1-202ENST00000427943 C6orf229H3BNL8 230 aa23.55■■□□□ 1.36
PSPC1-202ENST00000427943 RIMBP2O15034 1052 aa23.55■■□□□ 1.36
PSPC1-202ENST00000427943 RAD17O75943 681 aa23.55■■□□□ 1.36
PSPC1-202ENST00000427943 MAP1SQ66K74 1059 aaPredicted RBP23.55■■□□□ 1.36
PSPC1-202ENST00000427943 GPR101Q96P66 508 aaPredicted RBP23.55■■□□□ 1.36
PSPC1-202ENST00000427943 MYH16Q9H6N6 1097 aa23.55■■□□□ 1.36
PSPC1-202ENST00000427943 POLLQ9UGP5 575 aa23.55■■□□□ 1.36
PSPC1-202ENST00000427943 TRPM7Q96QT4 1865 aa23.54■■□□□ 1.36
PSPC1-202ENST00000427943 YDJCA8MPS7 323 aa23.54■■□□□ 1.36
PSPC1-202ENST00000427943 CTSWP56202 376 aa23.54■■□□□ 1.36
PSPC1-202ENST00000427943 WASHC4Q2M389 1173 aa23.54■■□□□ 1.36
PSPC1-202ENST00000427943 CIAPIN1Q6FI81 312 aa23.54■■□□□ 1.36
PSPC1-202ENST00000427943 ITGBL1O95965 494 aaPredicted RBP23.53■■□□□ 1.36
PSPC1-202ENST00000427943 GMPSP49915 693 aaPredicted RBP23.53■■□□□ 1.36
PSPC1-202ENST00000427943 UBE3BQ7Z3V4 1068 aa23.53■■□□□ 1.36
PSPC1-202ENST00000427943 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
PSPC1-202ENST00000427943 DNAAF4Q8WXU2 420 aa23.53■■□□□ 1.36
PSPC1-202ENST00000427943 DBNDD1Q9H9R9 158 aa23.53■■□□□ 1.36
PSPC1-202ENST00000427943 CREBZFQ9NS37 354 aa23.53■■□□□ 1.36
PSPC1-202ENST00000427943 GPRC5DQ9NZD1 345 aa23.53■■□□□ 1.36
PSPC1-202ENST00000427943 PSME4Q14997 1843 aa23.53■■□□□ 1.36
PSPC1-202ENST00000427943 TBC1D16Q8TBP0 767 aa23.52■■□□□ 1.36
PSPC1-202ENST00000427943 ANKRD18AQ8IVF6 992 aa23.51■■□□□ 1.35
PSPC1-202ENST00000427943 CNTROBQ8N137 903 aa23.51■■□□□ 1.35
PSPC1-202ENST00000427943 UFL1O94874 794 aa23.5■■□□□ 1.35
PSPC1-202ENST00000427943 GCKRQ14397 625 aa23.5■■□□□ 1.35
PSPC1-202ENST00000427943 TNIP1Q15025 636 aa23.5■■□□□ 1.35
PSPC1-202ENST00000427943 TTLL11Q8NHH1 800 aa23.5■■□□□ 1.35
PSPC1-202ENST00000427943 EYA3Q99504 573 aa23.5■■□□□ 1.35
PSPC1-202ENST00000427943 BCL2L13Q9BXK5 485 aa23.5■■□□□ 1.35
PSPC1-202ENST00000427943 ANKIB1Q9P2G1 1089 aa23.5■■□□□ 1.35
PSPC1-202ENST00000427943 MKRN1Q9UHC7 482 aaKnown RBP23.5■■□□□ 1.35
PSPC1-202ENST00000427943 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms