RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 CXCL9Q07325 125 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 KIAA2012Q0VF49 1180 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 MPNDQ8N594 471 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 FAM89AQ96GI7 184 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 ZNRF3Q9ULT6 936 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
DEPDC7-203ENST00000427755 RASSF10A6NK89 507 aa16.96■□□□□ 0.31
DEPDC7-203ENST00000427755 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
DEPDC7-203ENST00000427755 USP50Q70EL3 339 aaPredicted RBP16.96■□□□□ 0.31
DEPDC7-203ENST00000427755 TNS4Q8IZW8 715 aa16.96■□□□□ 0.31
DEPDC7-203ENST00000427755 GPRC5DQ9NZD1 345 aa16.96■□□□□ 0.31
DEPDC7-203ENST00000427755 FMR1Q06787 632 aaKnown RBP eCLIP16.95■□□□□ 0.3
DEPDC7-203ENST00000427755 TMC4Q7Z404 712 aa16.95■□□□□ 0.3
DEPDC7-203ENST00000427755 CELF1Q92879 486 aaKnown RBP16.95■□□□□ 0.3
DEPDC7-203ENST00000427755 ANKRD36CQ5JPF3 1778 aa16.94■□□□□ 0.3
DEPDC7-203ENST00000427755 YDJCA8MPS7 323 aa16.94■□□□□ 0.3
DEPDC7-203ENST00000427755 GNAI1P63096 354 aa16.94■□□□□ 0.3
DEPDC7-203ENST00000427755 PHAXQ9H814 394 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-203ENST00000427755 ADARB2Q9NS39 739 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-203ENST00000427755 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
DEPDC7-203ENST00000427755 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-203ENST00000427755 FOXN1O15353 648 aa16.93■□□□□ 0.3
DEPDC7-203ENST00000427755 GMPSP49915 693 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-203ENST00000427755 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
DEPDC7-203ENST00000427755 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-203ENST00000427755 CIAPIN1Q6FI81 312 aa16.93■□□□□ 0.3
DEPDC7-203ENST00000427755 TRAF5O00463 557 aa16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 IRS4O14654 1257 aaPredicted RBP16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 RAD17O75943 681 aa16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 DEFB115Q30KQ5 88 aa16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 ZBTB38Q8NAP3 1195 aaPredicted RBP16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 WBP1LQ9NX94 342 aa16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 LAMB2P55268 1798 aa16.92■□□□□ 0.3
DEPDC7-203ENST00000427755 COL4A1P02462 1669 aa16.91■□□□□ 0.3
DEPDC7-203ENST00000427755 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
DEPDC7-203ENST00000427755 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
DEPDC7-203ENST00000427755 CST9Q5W186 159 aa16.91■□□□□ 0.3
DEPDC7-203ENST00000427755 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
DEPDC7-203ENST00000427755 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
DEPDC7-203ENST00000427755 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
DEPDC7-203ENST00000427755 GPSM2P81274 684 aa16.9■□□□□ 0.3
DEPDC7-203ENST00000427755 TNIP1Q15025 636 aa16.9■□□□□ 0.3
DEPDC7-203ENST00000427755 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
DEPDC7-203ENST00000427755 PGAP2Q9UHJ9 254 aa16.9■□□□□ 0.3
DEPDC7-203ENST00000427755 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
DEPDC7-203ENST00000427755 SHTN1A0MZ66 631 aa16.89■□□□□ 0.29
DEPDC7-203ENST00000427755 WASHC4Q2M389 1173 aa16.89■□□□□ 0.29
DEPDC7-203ENST00000427755 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
DEPDC7-203ENST00000427755 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
DEPDC7-203ENST00000427755 MYD88Q99836 296 aa16.89■□□□□ 0.29
DEPDC7-203ENST00000427755 DDX60Q8IY21 1712 aaKnown RBP16.89■□□□□ 0.29
DEPDC7-203ENST00000427755 WDR33Q9C0J8 1336 aaKnown RBP16.89■□□□□ 0.29
DEPDC7-203ENST00000427755 LRRC37AA6NMS7 1700 aa16.88■□□□□ 0.29
DEPDC7-203ENST00000427755 PCCAP05165 728 aaPredicted RBP16.88■□□□□ 0.29
DEPDC7-203ENST00000427755 RPS8P62241 208 aaKnown RBP16.88■□□□□ 0.29
DEPDC7-203ENST00000427755 CCDC191Q8NCU4 936 aa16.88■□□□□ 0.29
DEPDC7-203ENST00000427755 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
DEPDC7-203ENST00000427755 PRDM10Q9NQV6 1147 aa16.88■□□□□ 0.29
DEPDC7-203ENST00000427755 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
DEPDC7-203ENST00000427755 PSMD14O00487 310 aa16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 CAPN15O75808 1086 aa16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 CCDC30Q5VVM6 783 aa16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 ZC3H15Q8WU90 426 aaKnown RBP16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 AIDAQ96BJ3 306 aa16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 METTL22Q9BUU2 404 aaPredicted RBP16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 CNOT7Q9UIV1 285 aaKnown RBP16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 TLL2Q9Y6L7 1015 aa16.87■□□□□ 0.29
DEPDC7-203ENST00000427755 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
DEPDC7-203ENST00000427755 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
DEPDC7-203ENST00000427755 TBC1D16Q8TBP0 767 aa16.86■□□□□ 0.29
DEPDC7-203ENST00000427755 DPF2Q92785 391 aa16.86■□□□□ 0.29
DEPDC7-203ENST00000427755 GLIS2Q9BZE0 524 aaPredicted RBP16.86■□□□□ 0.29
DEPDC7-203ENST00000427755 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
DEPDC7-203ENST00000427755 RIMBP2O15034 1052 aa16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 CAPNS2Q96L46 248 aa16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 KCNQ5Q9NR82 932 aa16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
DEPDC7-203ENST00000427755 TAF1P21675 1872 aa16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 ECE2O60344 883 aa16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 PDE8AO60658 829 aa16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 CELF2O95319 508 aaKnown RBP16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 MAP2K1Q02750 393 aaPredicted RBP16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 DOK7Q18PE1 504 aa16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 CYP4F22Q6NT55 531 aa16.84■□□□□ 0.29
DEPDC7-203ENST00000427755 SAPCD2Q86UD0 394 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms