RNA–Protein interactions for RNA: ENST00000427408.1

SSUH2-206, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-206ENST00000427408 CXCL9Q07325 125 aa17.64■□□□□ 0.41
SSUH2-206ENST00000427408 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
SSUH2-206ENST00000427408 SF3B3Q15393 1217 aaKnown RBP17.64■□□□□ 0.41
SSUH2-206ENST00000427408 PNMA8AQ86V59 439 aaPredicted RBP17.64■□□□□ 0.41
SSUH2-206ENST00000427408 CNTROBQ8N137 903 aa17.64■□□□□ 0.41
SSUH2-206ENST00000427408 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
SSUH2-206ENST00000427408 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
SSUH2-206ENST00000427408 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
SSUH2-206ENST00000427408 SUPT20HQ8NEM7 779 aa17.63■□□□□ 0.41
SSUH2-206ENST00000427408 VPS33BQ9H267 617 aa17.63■□□□□ 0.41
SSUH2-206ENST00000427408 ZNRF3Q9ULT6 936 aa17.63■□□□□ 0.41
SSUH2-206ENST00000427408 SCN4AP35499 1836 aa17.63■□□□□ 0.41
SSUH2-206ENST00000427408 LMOD1P29536 600 aaPredicted RBP17.62■□□□□ 0.41
SSUH2-206ENST00000427408 KIAA2012Q0VF49 1180 aa17.62■□□□□ 0.41
SSUH2-206ENST00000427408 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
SSUH2-206ENST00000427408 MYD88Q99836 296 aa17.62■□□□□ 0.41
SSUH2-206ENST00000427408 ANKRD36CQ5JPF3 1778 aa17.61■□□□□ 0.41
SSUH2-206ENST00000427408 RAD17O75943 681 aa17.61■□□□□ 0.41
SSUH2-206ENST00000427408 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
SSUH2-206ENST00000427408 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
SSUH2-206ENST00000427408 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
SSUH2-206ENST00000427408 HSPA1AP0DMV8 641 aaKnown RBP17.6■□□□□ 0.41
SSUH2-206ENST00000427408 HSPA1BP0DMV9 641 aaKnown RBP17.6■□□□□ 0.41
SSUH2-206ENST00000427408 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
SSUH2-206ENST00000427408 TMC4Q7Z404 712 aa17.6■□□□□ 0.41
SSUH2-206ENST00000427408 ZBTB38Q8NAP3 1195 aaPredicted RBP17.6■□□□□ 0.41
SSUH2-206ENST00000427408 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
SSUH2-206ENST00000427408 LTBP1Q14766 1721 aa17.6■□□□□ 0.41
SSUH2-206ENST00000427408 LAMB2P55268 1798 aa17.59■□□□□ 0.41
SSUH2-206ENST00000427408 YDJCA8MPS7 323 aa17.59■□□□□ 0.41
SSUH2-206ENST00000427408 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
SSUH2-206ENST00000427408 GMPSP49915 693 aaPredicted RBP17.59■□□□□ 0.41
SSUH2-206ENST00000427408 GPSM2P81274 684 aa17.59■□□□□ 0.41
SSUH2-206ENST00000427408 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
SSUH2-206ENST00000427408 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
SSUH2-206ENST00000427408 MRS2Q9HD23 443 aa17.59■□□□□ 0.41
SSUH2-206ENST00000427408 GPRC5DQ9NZD1 345 aa17.59■□□□□ 0.41
SSUH2-206ENST00000427408 POLLQ9UGP5 575 aa17.59■□□□□ 0.41
SSUH2-206ENST00000427408 NSFL1CQ9UNZ2 370 aaKnown RBP17.59■□□□□ 0.41
SSUH2-206ENST00000427408 TAF1P21675 1872 aa17.58■□□□□ 0.41
SSUH2-206ENST00000427408 COL4A1P02462 1669 aa17.58■□□□□ 0.41
SSUH2-206ENST00000427408 CNTNAP1P78357 1384 aa17.58■□□□□ 0.4
SSUH2-206ENST00000427408 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
SSUH2-206ENST00000427408 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
SSUH2-206ENST00000427408 CIAPIN1Q6FI81 312 aa17.58■□□□□ 0.4
SSUH2-206ENST00000427408 CCDC191Q8NCU4 936 aa17.58■□□□□ 0.4
SSUH2-206ENST00000427408 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
SSUH2-206ENST00000427408 ADAMTSL1Q8N6G6 1762 aa17.58■□□□□ 0.4
SSUH2-206ENST00000427408 SHTN1A0MZ66 631 aa17.57■□□□□ 0.4
SSUH2-206ENST00000427408 RIMBP2O15034 1052 aa17.57■□□□□ 0.4
SSUH2-206ENST00000427408 PCCAP05165 728 aaPredicted RBP17.57■□□□□ 0.4
SSUH2-206ENST00000427408 VEGFBP49765 207 aa17.57■□□□□ 0.4
SSUH2-206ENST00000427408 USP50Q70EL3 339 aaPredicted RBP17.57■□□□□ 0.4
SSUH2-206ENST00000427408 G2E3Q7L622 706 aa17.57■□□□□ 0.4
SSUH2-206ENST00000427408 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
SSUH2-206ENST00000427408 CWC25Q9NXE8 425 aaPredicted RBP17.57■□□□□ 0.4
SSUH2-206ENST00000427408 MAP3K2Q9Y2U5 619 aa17.57■□□□□ 0.4
SSUH2-206ENST00000427408 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SSUH2-206ENST00000427408 C6orf229H3BNL8 230 aa17.56■□□□□ 0.4
SSUH2-206ENST00000427408 TRAF5O00463 557 aa17.56■□□□□ 0.4
SSUH2-206ENST00000427408 IGKV5-2P06315 115 aa17.56■□□□□ 0.4
SSUH2-206ENST00000427408 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
SSUH2-206ENST00000427408 DBNDD1Q9H9R9 158 aa17.56■□□□□ 0.4
SSUH2-206ENST00000427408 ADARB2Q9NS39 739 aaKnown RBP17.56■□□□□ 0.4
SSUH2-206ENST00000427408 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
SSUH2-206ENST00000427408 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
SSUH2-206ENST00000427408 PI4KAP2A4QPH2 592 aa17.55■□□□□ 0.4
SSUH2-206ENST00000427408 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
SSUH2-206ENST00000427408 TNIP1Q15025 636 aa17.55■□□□□ 0.4
SSUH2-206ENST00000427408 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
SSUH2-206ENST00000427408 KSR2Q6VAB6 950 aa17.55■□□□□ 0.4
SSUH2-206ENST00000427408 PI4KAP1Q8N8J0 262 aa17.55■□□□□ 0.4
SSUH2-206ENST00000427408 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
SSUH2-206ENST00000427408 KCNQ5Q9NR82 932 aa17.55■□□□□ 0.4
SSUH2-206ENST00000427408 ANP32CO43423 234 aa17.54■□□□□ 0.4
SSUH2-206ENST00000427408 HIRAP54198 1017 aaPredicted RBP17.54■□□□□ 0.4
SSUH2-206ENST00000427408 DOK7Q18PE1 504 aa17.54■□□□□ 0.4
SSUH2-206ENST00000427408 TBC1D16Q8TBP0 767 aa17.54■□□□□ 0.4
SSUH2-206ENST00000427408 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
SSUH2-206ENST00000427408 ZBTB12Q9Y330 459 aaPredicted RBP17.54■□□□□ 0.4
SSUH2-206ENST00000427408 IL16Q14005 1332 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 PSMD14O00487 310 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 PDE8AO60658 829 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 CST9Q5W186 159 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
SSUH2-206ENST00000427408 CNOT7Q9UIV1 285 aaKnown RBP17.53■□□□□ 0.4
SSUH2-206ENST00000427408 RASSF10A6NK89 507 aa17.52■□□□□ 0.4
SSUH2-206ENST00000427408 CWF19L2Q2TBE0 894 aaKnown RBP17.52■□□□□ 0.4
SSUH2-206ENST00000427408 DEFB115Q30KQ5 88 aa17.52■□□□□ 0.4
SSUH2-206ENST00000427408 ABT1Q9ULW3 272 aaKnown RBP17.52■□□□□ 0.4
SSUH2-206ENST00000427408 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
SSUH2-206ENST00000427408 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SSUH2-206ENST00000427408 GLIS2Q9BZE0 524 aaPredicted RBP17.51■□□□□ 0.39
SSUH2-206ENST00000427408 PGAP2Q9UHJ9 254 aa17.51■□□□□ 0.39
SSUH2-206ENST00000427408 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
SSUH2-206ENST00000427408 FOXN1O15353 648 aa17.5■□□□□ 0.39
SSUH2-206ENST00000427408 ECE2O60344 883 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms