RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
NELFE-203ENST00000426722 CFAP44Q96MT7 982 aa16.78■□□□□ 0.28
NELFE-203ENST00000426722 WBP1LQ9NX94 342 aa16.78■□□□□ 0.28
NELFE-203ENST00000426722 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
NELFE-203ENST00000426722 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
NELFE-203ENST00000426722 MAP2K1Q02750 393 aaPredicted RBP16.77■□□□□ 0.28
NELFE-203ENST00000426722 CXCL9Q07325 125 aa16.77■□□□□ 0.28
NELFE-203ENST00000426722 TNIP1Q15025 636 aa16.77■□□□□ 0.28
NELFE-203ENST00000426722 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
NELFE-203ENST00000426722 HYPKQ9NX55 129 aa16.77■□□□□ 0.28
NELFE-203ENST00000426722 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.28
NELFE-203ENST00000426722 ABT1Q9ULW3 272 aaKnown RBP16.77■□□□□ 0.28
NELFE-203ENST00000426722 WDR33Q9C0J8 1336 aaKnown RBP16.76■□□□□ 0.27
NELFE-203ENST00000426722 ECE1P42892 770 aa16.76■□□□□ 0.27
NELFE-203ENST00000426722 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
NELFE-203ENST00000426722 KRT24Q2M2I5 525 aa16.76■□□□□ 0.27
NELFE-203ENST00000426722 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
NELFE-203ENST00000426722 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
NELFE-203ENST00000426722 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
NELFE-203ENST00000426722 CAPN15O75808 1086 aa16.75■□□□□ 0.27
NELFE-203ENST00000426722 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
NELFE-203ENST00000426722 SLC51AQ86UW1 340 aa16.75■□□□□ 0.27
NELFE-203ENST00000426722 LRRC37AA6NMS7 1700 aa16.75■□□□□ 0.27
NELFE-203ENST00000426722 TAF1P21675 1872 aa16.75■□□□□ 0.27
NELFE-203ENST00000426722 ZC3H15Q8WU90 426 aaKnown RBP16.74■□□□□ 0.27
NELFE-203ENST00000426722 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
NELFE-203ENST00000426722 PGAP2Q9UHJ9 254 aa16.74■□□□□ 0.27
NELFE-203ENST00000426722 PCNTO95613 3336 aa16.73■□□□□ 0.27
NELFE-203ENST00000426722 HSP90B1P14625 803 aaKnown RBP16.73■□□□□ 0.27
NELFE-203ENST00000426722 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
NELFE-203ENST00000426722 DUSP27Q5VZP5 1158 aa16.73■□□□□ 0.27
NELFE-203ENST00000426722 CHMP4AQ9BY43 222 aa16.73■□□□□ 0.27
NELFE-203ENST00000426722 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
NELFE-203ENST00000426722 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
NELFE-203ENST00000426722 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 GNAI1P63096 354 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 CST9Q5W186 159 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 FAM89AQ96GI7 184 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 CAPNS2Q96L46 248 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
NELFE-203ENST00000426722 MBIPQ9NS73 344 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 IFT57Q9NWB7 429 aa16.71■□□□□ 0.27
NELFE-203ENST00000426722 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 H7C1D1 291 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 RAD17O75943 681 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 WASHC4Q2M389 1173 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 DPF2Q92785 391 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 HHIPL1Q96JK4 782 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 EYA3Q99504 573 aa16.7■□□□□ 0.26
NELFE-203ENST00000426722 CNOT7Q9UIV1 285 aaKnown RBP16.7■□□□□ 0.26
NELFE-203ENST00000426722 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
NELFE-203ENST00000426722 YDJCA8MPS7 323 aa16.69■□□□□ 0.26
NELFE-203ENST00000426722 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
NELFE-203ENST00000426722 HSPA8P11142 646 aaKnown RBP16.69■□□□□ 0.26
NELFE-203ENST00000426722 MAP2K2P36507 400 aa16.69■□□□□ 0.26
NELFE-203ENST00000426722 LBX1P52954 281 aa16.69■□□□□ 0.26
NELFE-203ENST00000426722 FMR1Q06787 632 aaKnown RBP eCLIP16.69■□□□□ 0.26
NELFE-203ENST00000426722 GOLGA2Q08379 1002 aa16.69■□□□□ 0.26
NELFE-203ENST00000426722 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
NELFE-203ENST00000426722 RIC3Q7Z5B4 369 aa16.69■□□□□ 0.26
NELFE-203ENST00000426722 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
NELFE-203ENST00000426722 GPR101Q96P66 508 aaPredicted RBP16.69■□□□□ 0.26
NELFE-203ENST00000426722 BEGAINQ9BUH8 593 aa16.69■□□□□ 0.26
NELFE-203ENST00000426722 TRAF5O00463 557 aa16.68■□□□□ 0.26
NELFE-203ENST00000426722 PAXIP1Q6ZW49 1069 aaPredicted RBP16.68■□□□□ 0.26
NELFE-203ENST00000426722 ZBTB38Q8NAP3 1195 aaPredicted RBP16.68■□□□□ 0.26
NELFE-203ENST00000426722 CELF2O95319 508 aaKnown RBP16.67■□□□□ 0.26
NELFE-203ENST00000426722 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
NELFE-203ENST00000426722 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
NELFE-203ENST00000426722 CYP4F22Q6NT55 531 aa16.67■□□□□ 0.26
NELFE-203ENST00000426722 SAPCD2Q86UD0 394 aa16.67■□□□□ 0.26
NELFE-203ENST00000426722 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
NELFE-203ENST00000426722 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
NELFE-203ENST00000426722 APAF1O14727 1248 aa16.66■□□□□ 0.26
NELFE-203ENST00000426722 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
NELFE-203ENST00000426722 GLIS2Q9BZE0 524 aaPredicted RBP16.66■□□□□ 0.26
NELFE-203ENST00000426722 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
NELFE-203ENST00000426722 POLLQ9UGP5 575 aa16.66■□□□□ 0.26
NELFE-203ENST00000426722 PSMD14O00487 310 aa16.65■□□□□ 0.26
NELFE-203ENST00000426722 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
NELFE-203ENST00000426722 GPSM2P81274 684 aa16.65■□□□□ 0.26
NELFE-203ENST00000426722 MICALL2Q8IY33 904 aa16.65■□□□□ 0.26
NELFE-203ENST00000426722 TRPM4Q8TD43 1214 aa16.65■□□□□ 0.26
NELFE-203ENST00000426722 PHAXQ9H814 394 aaKnown RBP16.65■□□□□ 0.26
NELFE-203ENST00000426722 RIMBP2O15034 1052 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 CA12O43570 354 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 PDE8AO60658 829 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 PCCAP05165 728 aaPredicted RBP16.64■□□□□ 0.25
NELFE-203ENST00000426722 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 RTL5Q5HYW3 569 aaPredicted RBP16.64■□□□□ 0.25
NELFE-203ENST00000426722 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 TBC1D16Q8TBP0 767 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 MYD88Q99836 296 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
NELFE-203ENST00000426722 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
NELFE-203ENST00000426722 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
NELFE-203ENST00000426722 ECE2O60344 883 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms