RNA–Protein interactions for RNA: ENST00000425346.5

CYB561D2-205, Transcript of cytochrome b561 family member D2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561D2-205	ENST00000425346	MPND	Q8N594	471 aa		27.77	■■■□□ 2.04
CYB561D2-205	ENST00000425346	GRAPL	Q8TC17	118 aa	Predicted RBP	27.77	■■■□□ 2.04
CYB561D2-205	ENST00000425346	FAM89A	Q96GI7	184 aa		27.77	■■■□□ 2.04
CYB561D2-205	ENST00000425346	COL4A1	P02462	1669 aa		27.77	■■■□□ 2.04
CYB561D2-205	ENST00000425346	RASSF10	A6NK89	507 aa		27.76	■■■□□ 2.03
CYB561D2-205	ENST00000425346	TRAF5	O00463	557 aa		27.76	■■■□□ 2.03
CYB561D2-205	ENST00000425346	ZNF853	P0CG23	659 aa		27.76	■■■□□ 2.03
CYB561D2-205	ENST00000425346	VPS33B	Q9H267	617 aa		27.76	■■■□□ 2.03
CYB561D2-205	ENST00000425346	GPRC5D	Q9NZD1	345 aa		27.76	■■■□□ 2.03
CYB561D2-205	ENST00000425346	HOXB7	P09629	217 aa		27.75	■■■□□ 2.03
CYB561D2-205	ENST00000425346	KIAA2012	Q0VF49	1180 aa		27.75	■■■□□ 2.03
CYB561D2-205	ENST00000425346	DEFB115	Q30KQ5	88 aa		27.75	■■■□□ 2.03
CYB561D2-205	ENST00000425346	TMX4	Q9H1E5	349 aa	Predicted RBP	27.75	■■■□□ 2.03
CYB561D2-205	ENST00000425346	DBF4	Q9UBU7	674 aa	Predicted RBP	27.75	■■■□□ 2.03
CYB561D2-205	ENST00000425346	RTL5	Q5HYW3	569 aa	Predicted RBP	27.74	■■■□□ 2.03
CYB561D2-205	ENST00000425346	CST9	Q5W186	159 aa		27.74	■■■□□ 2.03
CYB561D2-205	ENST00000425346	USP50	Q70EL3	339 aa	Predicted RBP	27.74	■■■□□ 2.03
CYB561D2-205	ENST00000425346	YDJC	A8MPS7	323 aa		27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	APAF1	O14727	1248 aa		27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	RAD17	O75943	681 aa		27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	GMPS	P49915	693 aa	Predicted RBP	27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	SUPT20H	Q8NEM7	779 aa		27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	CELF1	Q92879	486 aa	Known RBP	27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	WBP1L	Q9NX94	342 aa		27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	DUOX1	Q9NRD9	1551 aa		27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	DDX60	Q8IY21	1712 aa	Known RBP	27.73	■■■□□ 2.03
CYB561D2-205	ENST00000425346	SHTN1	A0MZ66	631 aa		27.71	■■■□□ 2.03
CYB561D2-205	ENST00000425346	ELL2	O00472	640 aa	Predicted RBP	27.71	■■■□□ 2.03
CYB561D2-205	ENST00000425346	PHAX	Q9H814	394 aa	Known RBP	27.71	■■■□□ 2.03
CYB561D2-205	ENST00000425346	HYPK	Q9NX55	129 aa		27.71	■■■□□ 2.03
CYB561D2-205	ENST00000425346	ABT1	Q9ULW3	272 aa	Known RBP	27.71	■■■□□ 2.03
CYB561D2-205	ENST00000425346	HIRA	P54198	1017 aa	Predicted RBP	27.7	■■■□□ 2.03
CYB561D2-205	ENST00000425346	SF3B3	Q15393	1217 aa	Known RBP	27.7	■■■□□ 2.03
CYB561D2-205	ENST00000425346	ADARB2	Q9NS39	739 aa	Known RBP	27.7	■■■□□ 2.03
CYB561D2-205	ENST00000425346	WDR33	Q9C0J8	1336 aa	Known RBP	27.7	■■■□□ 2.02
CYB561D2-205	ENST00000425346	CIAPIN1	Q6FI81	312 aa		27.69	■■■□□ 2.02
CYB561D2-205	ENST00000425346	TRIM28	Q13263	835 aa	Known RBP	27.68	■■■□□ 2.02
CYB561D2-205	ENST00000425346	LRRC37A	A6NMS7	1700 aa		27.67	■■■□□ 2.02
CYB561D2-205	ENST00000425346	C8orf58	Q8NAV2	365 aa		27.67	■■■□□ 2.02
CYB561D2-205	ENST00000425346	POLL	Q9UGP5	575 aa		27.67	■■■□□ 2.02
CYB561D2-205	ENST00000425346	IRS4	O14654	1257 aa	Predicted RBP	27.66	■■■□□ 2.02
CYB561D2-205	ENST00000425346	GPSM2	P81274	684 aa		27.66	■■■□□ 2.02
CYB561D2-205	ENST00000425346	TRPM4	Q8TD43	1214 aa		27.66	■■■□□ 2.02
CYB561D2-205	ENST00000425346	KCNQ5	Q9NR82	932 aa		27.66	■■■□□ 2.02
CYB561D2-205	ENST00000425346	IFT57	Q9NWB7	429 aa		27.66	■■■□□ 2.02
CYB561D2-205	ENST00000425346	PGAP2	Q9UHJ9	254 aa		27.66	■■■□□ 2.02
CYB561D2-205	ENST00000425346	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.66	■■■□□ 2.02
CYB561D2-205	ENST00000425346	CTCF	P49711	727 aa	Predicted RBP	27.65	■■■□□ 2.02
CYB561D2-205	ENST00000425346	LBX1	P52954	281 aa		27.65	■■■□□ 2.02
CYB561D2-205	ENST00000425346	JARID2	Q92833	1246 aa	Predicted RBP	27.65	■■■□□ 2.02
CYB561D2-205	ENST00000425346	GPR101	Q96P66	508 aa	Predicted RBP	27.65	■■■□□ 2.02
CYB561D2-205	ENST00000425346	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.65	■■■□□ 2.02
CYB561D2-205	ENST00000425346	PRDM10	Q9NQV6	1147 aa		27.65	■■■□□ 2.02
CYB561D2-205	ENST00000425346	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.65	■■■□□ 2.02
CYB561D2-205	ENST00000425346	CCDC184	Q52MB2	194 aa		27.64	■■■□□ 2.01
CYB561D2-205	ENST00000425346	CYP4F22	Q6NT55	531 aa		27.64	■■■□□ 2.01
CYB561D2-205	ENST00000425346	TMC4	Q7Z404	712 aa		27.64	■■■□□ 2.01
CYB561D2-205	ENST00000425346	CNOT7	Q9UIV1	285 aa	Known RBP	27.64	■■■□□ 2.01
CYB561D2-205	ENST00000425346	RIMBP2	O15034	1052 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	TNIP1	Q15025	636 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	DLK2	Q6UY11	383 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	RIC3	Q7Z5B4	369 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	AIDA	Q96BJ3	306 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	CAPNS2	Q96L46	248 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	BCL2L13	Q9BXK5	485 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	DBNDD1	Q9H9R9	158 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	SEC31B	Q9NQW1	1179 aa		27.63	■■■□□ 2.01
CYB561D2-205	ENST00000425346	WASHC4	Q2M389	1173 aa		27.62	■■■□□ 2.01
CYB561D2-205	ENST00000425346	TLL2	Q9Y6L7	1015 aa		27.62	■■■□□ 2.01
CYB561D2-205	ENST00000425346	PSMD14	O00487	310 aa		27.61	■■■□□ 2.01
CYB561D2-205	ENST00000425346	GNAI1	P63096	354 aa		27.61	■■■□□ 2.01
CYB561D2-205	ENST00000425346	GRM1	Q13255	1194 aa		27.61	■■■□□ 2.01
CYB561D2-205	ENST00000425346	TSPYL6	Q8N831	410 aa		27.61	■■■□□ 2.01
CYB561D2-205	ENST00000425346	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.61	■■■□□ 2.01
CYB561D2-205	ENST00000425346	MYD88	Q99836	296 aa		27.61	■■■□□ 2.01
CYB561D2-205	ENST00000425346	TRPM7	Q96QT4	1865 aa		27.61	■■■□□ 2.01
CYB561D2-205	ENST00000425346	EGFR	P00533	1210 aa		27.6	■■■□□ 2.01
CYB561D2-205	ENST00000425346	HSPA8	P11142	646 aa	Known RBP	27.6	■■■□□ 2.01
CYB561D2-205	ENST00000425346	RPS8	P62241	208 aa	Known RBP	27.6	■■■□□ 2.01
CYB561D2-205	ENST00000425346	C6orf229	H3BNL8	230 aa		27.59	■■■□□ 2.01
CYB561D2-205	ENST00000425346	CELF2	O95319	508 aa	Known RBP	27.59	■■■□□ 2.01
CYB561D2-205	ENST00000425346	DOK7	Q18PE1	504 aa		27.59	■■■□□ 2.01
CYB561D2-205	ENST00000425346	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	27.59	■■■□□ 2.01
CYB561D2-205	ENST00000425346	MICALL2	Q8IY33	904 aa		27.59	■■■□□ 2.01
CYB561D2-205	ENST00000425346	TBC1D16	Q8TBP0	767 aa		27.59	■■■□□ 2.01
CYB561D2-205	ENST00000425346	CDHR2	Q9BYE9	1310 aa		27.58	■■■□□ 2.01
CYB561D2-205	ENST00000425346	RTL9	Q8NET4	1388 aa		27.58	■■■□□ 2.01
CYB561D2-205	ENST00000425346	GOLGA2	Q08379	1002 aa		27.58	■■■□□ 2.01
CYB561D2-205	ENST00000425346	SAMD7	Q7Z3H4	446 aa		27.58	■■■□□ 2.01
CYB561D2-205	ENST00000425346	SAPCD2	Q86UD0	394 aa		27.58	■■■□□ 2.01
CYB561D2-205	ENST00000425346	AOC2	O75106	756 aa		27.57	■■■□□ 2
CYB561D2-205	ENST00000425346	MAP2K1	Q02750	393 aa	Predicted RBP	27.57	■■■□□ 2
CYB561D2-205	ENST00000425346	ZC3H15	Q8WU90	426 aa	Known RBP	27.56	■■■□□ 2
CYB561D2-205	ENST00000425346	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.56	■■■□□ 2
CYB561D2-205	ENST00000425346	ECE2	O60344	883 aa		27.55	■■■□□ 2
CYB561D2-205	ENST00000425346	THSD7B	Q9C0I4	1608 aa		27.54	■■■□□ 2
CYB561D2-205	ENST00000425346		H7C1D1	291 aa		27.54	■■■□□ 2
CYB561D2-205	ENST00000425346	PCCA	P05165	728 aa	Predicted RBP	27.54	■■■□□ 2
CYB561D2-205	ENST00000425346	DPF2	Q92785	391 aa		27.54	■■■□□ 2
CYB561D2-205	ENST00000425346	TSR2	Q969E8	191 aa	Known RBP	27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms