RNA–Protein interactions for RNA: ENST00000422832.1

HLA-DMA-204, Transcript of major histocompatibility complex, class II, DM alpha, human

Gene HLA-DMA, Length 611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DMA-204	ENST00000422832	C8orf58	Q8NAV2	365 aa		10.85	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	MKRN1	Q9UHC7	482 aa	Known RBP	10.85	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	ZNRF3	Q9ULT6	936 aa		10.85	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	SNED1	Q8TER0	1413 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	TMEM88B	A6NKF7	163 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	IRS4	O14654	1257 aa	Predicted RBP	10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	TRIM28	Q13263	835 aa	Known RBP	10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	TNIP1	Q15025	636 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	MAP1S	Q66K74	1059 aa	Predicted RBP	10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	SLC51A	Q86UW1	340 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	MYD88	Q99836	296 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	BCL2L13	Q9BXK5	485 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	STK31	Q9BXU1	1019 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	PHAX	Q9H814	394 aa	Known RBP	10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	MRS2	Q9HD23	443 aa		10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.84	□□□□□ -0.67
HLA-DMA-204	ENST00000422832	TAF1	P21675	1872 aa		10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	C6orf229	H3BNL8	230 aa		10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ITGBL1	O95965	494 aa	Predicted RBP	10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	EPS15	P42566	896 aa		10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	SF3B3	Q15393	1217 aa	Known RBP	10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CIAPIN1	Q6FI81	312 aa		10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	USP50	Q70EL3	339 aa	Predicted RBP	10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CWC25	Q9NXE8	425 aa	Predicted RBP	10.83	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	COL4A5	P29400	1685 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832		G3V3G9	751 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	RAD17	O75943	681 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	HSPA1A	P0DMV8	641 aa	Known RBP	10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	HSPA1B	P0DMV9	641 aa	Known RBP	10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	SCNN1D	P51172	638 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	RPS8	P62241	208 aa	Known RBP	10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CXCL9	Q07325	125 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	KIAA2012	Q0VF49	1180 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	NEXN	Q0ZGT2	675 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	WASHC4	Q2M389	1173 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CCDC184	Q52MB2	194 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	DCAF8	Q5TAQ9	597 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CCDC191	Q8NCU4	936 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	TSR2	Q969E8	191 aa	Known RBP	10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	GPRC5D	Q9NZD1	345 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ABT1	Q9ULW3	272 aa	Known RBP	10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	PASK	Q96RG2	1323 aa		10.82	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	DDX60	Q8IY21	1712 aa	Known RBP	10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	RIMBP2	O15034	1052 aa		10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	GMPS	P49915	693 aa	Predicted RBP	10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CCDC152	Q4G0S7	254 aa		10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	WWC1	Q8IX03	1113 aa		10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CELF1	Q92879	486 aa	Known RBP	10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	AIDA	Q96BJ3	306 aa		10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	EYA3	Q99504	573 aa		10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	METTL22	Q9BUU2	404 aa	Predicted RBP	10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ADARB2	Q9NS39	739 aa	Known RBP	10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ANKIB1	Q9P2G1	1089 aa		10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	MAP3K2	Q9Y2U5	619 aa		10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	SALL2	Q9Y467	1007 aa	Predicted RBP	10.81	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CNTNAP1	P78357	1384 aa		10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832		H7C1D1	291 aa		10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	PCCA	P05165	728 aa	Predicted RBP	10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CCDC27	Q2M243	656 aa		10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	TWISTNB	Q3B726	338 aa	Predicted RBP	10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	KSR2	Q6VAB6	950 aa		10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	TSPYL6	Q8N831	410 aa		10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	JARID2	Q92833	1246 aa	Predicted RBP	10.8	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	PI4KAP2	A4QPH2	592 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	PDE8A	O60658	829 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	SLC4A2	P04920	1241 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	GPSM2	P81274	684 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	DEFB115	Q30KQ5	88 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	TNS4	Q8IZW8	715 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	PI4KAP1	Q8N8J0	262 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	DBNDD1	Q9H9R9	158 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	IL16	Q14005	1332 aa		10.79	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ADAMTSL1	Q8N6G6	1762 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	UFL1	O94874	794 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	VEGFB	P49765	207 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	DOK7	Q18PE1	504 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	ANKRD18A	Q8IVF6	992 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	SEC31B	Q9NQW1	1179 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	POLL	Q9UGP5	575 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CNOT7	Q9UIV1	285 aa	Known RBP	10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	GGA1	Q9UJY5	639 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	CDHR2	Q9BYE9	1310 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	LTBP1	Q14766	1721 aa		10.78	□□□□□ -0.68
HLA-DMA-204	ENST00000422832	YDJC	A8MPS7	323 aa		10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	TRAF5	O00463	557 aa		10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	ECE2	O60344	883 aa		10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	GRM1	Q13255	1194 aa		10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	MICALL2	Q8IY33	904 aa		10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	TBC1D16	Q8TBP0	767 aa		10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	CDC5L	Q99459	802 aa	Known RBP	10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	LRRC37A	A6NMS7	1700 aa		10.77	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	RASSF10	A6NK89	507 aa		10.76	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	PSMD14	O00487	310 aa		10.76	□□□□□ -0.69
HLA-DMA-204	ENST00000422832	ECE1	P42892	770 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms