RNA–Protein interactions for RNA: ENST00000421582.2

CCDC107-205, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-205ENST00000421582 TMX4Q9H1E5 349 aaPredicted RBP28.59■■■□□ 2.17
CCDC107-205ENST00000421582 MRS2Q9HD23 443 aa28.59■■■□□ 2.17
CCDC107-205ENST00000421582 TRIM28Q13263 835 aaKnown RBP28.58■■■□□ 2.17
CCDC107-205ENST00000421582 DPP8Q6V1X1 898 aaPredicted RBP28.58■■■□□ 2.17
CCDC107-205ENST00000421582 WWC1Q8IX03 1113 aa28.58■■■□□ 2.17
CCDC107-205ENST00000421582 PASKQ96RG2 1323 aa28.57■■■□□ 2.16
CCDC107-205ENST00000421582 SCNN1DP51172 638 aa28.57■■■□□ 2.16
CCDC107-205ENST00000421582 CCDC27Q2M243 656 aa28.57■■■□□ 2.16
CCDC107-205ENST00000421582 MYD88Q99836 296 aa28.57■■■□□ 2.16
CCDC107-205ENST00000421582 SF3B3Q15393 1217 aaKnown RBP28.56■■■□□ 2.16
CCDC107-205ENST00000421582 MPNDQ8N594 471 aa28.56■■■□□ 2.16
CCDC107-205ENST00000421582 CELF1Q92879 486 aaKnown RBP28.56■■■□□ 2.16
CCDC107-205ENST00000421582 IRS4O14654 1257 aaPredicted RBP28.55■■■□□ 2.16
CCDC107-205ENST00000421582 ITGBL1O95965 494 aaPredicted RBP28.54■■■□□ 2.16
CCDC107-205ENST00000421582 CCDC30Q5VVM6 783 aa28.54■■■□□ 2.16
CCDC107-205ENST00000421582 SUPT20HQ8NEM7 779 aa28.54■■■□□ 2.16
CCDC107-205ENST00000421582 CREBZFQ9NS37 354 aa28.54■■■□□ 2.16
CCDC107-205ENST00000421582 ANP32CO43423 234 aa28.53■■■□□ 2.16
CCDC107-205ENST00000421582 PNMA8AQ86V59 439 aaPredicted RBP28.53■■■□□ 2.16
CCDC107-205ENST00000421582 VPS33BQ9H267 617 aa28.53■■■□□ 2.16
CCDC107-205ENST00000421582 CLEC11AQ9Y240 323 aa28.53■■■□□ 2.16
CCDC107-205ENST00000421582 EPS15P42566 896 aa28.52■■■□□ 2.16
CCDC107-205ENST00000421582 MAP1SQ66K74 1059 aaPredicted RBP28.52■■■□□ 2.16
CCDC107-205ENST00000421582 ZBTB38Q8NAP3 1195 aaPredicted RBP28.52■■■□□ 2.16
CCDC107-205ENST00000421582 KIAA2012Q0VF49 1180 aa28.51■■■□□ 2.15
CCDC107-205ENST00000421582 ZNRF3Q9ULT6 936 aa28.51■■■□□ 2.15
CCDC107-205ENST00000421582 LMOD1P29536 600 aaPredicted RBP28.5■■■□□ 2.15
CCDC107-205ENST00000421582 CXCL9Q07325 125 aa28.5■■■□□ 2.15
CCDC107-205ENST00000421582 TMC4Q7Z404 712 aa28.5■■■□□ 2.15
CCDC107-205ENST00000421582 JARID2Q92833 1246 aaPredicted RBP28.5■■■□□ 2.15
CCDC107-205ENST00000421582 METTL22Q9BUU2 404 aaPredicted RBP28.49■■■□□ 2.15
CCDC107-205ENST00000421582 MKRN1Q9UHC7 482 aaKnown RBP28.49■■■□□ 2.15
CCDC107-205ENST00000421582 MAP3K2Q9Y2U5 619 aa28.49■■■□□ 2.15
CCDC107-205ENST00000421582 IFFO2Q5TF58 517 aa28.48■■■□□ 2.15
CCDC107-205ENST00000421582 CCDC191Q8NCU4 936 aa28.48■■■□□ 2.15
CCDC107-205ENST00000421582 DDX58O95786 925 aaKnown RBP28.47■■■□□ 2.15
CCDC107-205ENST00000421582 TWISTNBQ3B726 338 aaPredicted RBP28.47■■■□□ 2.15
CCDC107-205ENST00000421582 CNTROBQ8N137 903 aa28.47■■■□□ 2.15
CCDC107-205ENST00000421582 SEC31BQ9NQW1 1179 aa28.47■■■□□ 2.15
CCDC107-205ENST00000421582 CWC25Q9NXE8 425 aaPredicted RBP28.47■■■□□ 2.15
CCDC107-205ENST00000421582 YDJCA8MPS7 323 aa28.46■■■□□ 2.15
CCDC107-205ENST00000421582 PCCAP05165 728 aaPredicted RBP28.46■■■□□ 2.15
CCDC107-205ENST00000421582 IL16Q14005 1332 aa28.46■■■□□ 2.15
CCDC107-205ENST00000421582 SALL2Q9Y467 1007 aaPredicted RBP28.46■■■□□ 2.15
CCDC107-205ENST00000421582 FANCIQ9NVI1 1328 aa28.45■■■□□ 2.15
CCDC107-205ENST00000421582 PI4KAP2A4QPH2 592 aa28.45■■■□□ 2.15
CCDC107-205ENST00000421582 GPSM2P81274 684 aa28.45■■■□□ 2.15
CCDC107-205ENST00000421582 G2E3Q7L622 706 aa28.45■■■□□ 2.15
CCDC107-205ENST00000421582 PI4KAP1Q8N8J0 262 aa28.45■■■□□ 2.15
CCDC107-205ENST00000421582 GPRC5DQ9NZD1 345 aa28.45■■■□□ 2.15
CCDC107-205ENST00000421582 NSFL1CQ9UNZ2 370 aaKnown RBP28.45■■■□□ 2.15
CCDC107-205ENST00000421582 CNTNAP1P78357 1384 aa28.45■■■□□ 2.14
CCDC107-205ENST00000421582 RAD17O75943 681 aa28.44■■■□□ 2.14
CCDC107-205ENST00000421582 IGKV5-2P06315 115 aa28.44■■■□□ 2.14
CCDC107-205ENST00000421582 GMPSP49915 693 aaPredicted RBP28.44■■■□□ 2.14
CCDC107-205ENST00000421582 NCBP3Q53F19 620 aaKnown RBP28.44■■■□□ 2.14
CCDC107-205ENST00000421582 KSR2Q6VAB6 950 aa28.44■■■□□ 2.14
CCDC107-205ENST00000421582 STK31Q9BXU1 1019 aa28.44■■■□□ 2.14
CCDC107-205ENST00000421582 CHMP4AQ9BY43 222 aa28.44■■■□□ 2.14
CCDC107-205ENST00000421582 POLLQ9UGP5 575 aa28.44■■■□□ 2.14
CCDC107-205ENST00000421582 TMEM88BA6NKF7 163 aa28.43■■■□□ 2.14
CCDC107-205ENST00000421582 RPS8P62241 208 aaKnown RBP28.43■■■□□ 2.14
CCDC107-205ENST00000421582 CCDC85AQ96PX6 553 aaPredicted RBP28.43■■■□□ 2.14
CCDC107-205ENST00000421582 CIAPIN1Q6FI81 312 aa28.43■■■□□ 2.14
CCDC107-205ENST00000421582 GPR101Q96P66 508 aaPredicted RBP28.43■■■□□ 2.14
CCDC107-205ENST00000421582 PDE8AO60658 829 aa28.42■■■□□ 2.14
CCDC107-205ENST00000421582 HSPA1AP0DMV8 641 aaKnown RBP28.42■■■□□ 2.14
CCDC107-205ENST00000421582 HSPA1BP0DMV9 641 aaKnown RBP28.42■■■□□ 2.14
CCDC107-205ENST00000421582 FMR1Q06787 632 aaKnown RBP eCLIP28.42■■■□□ 2.14
CCDC107-205ENST00000421582 USP50Q70EL3 339 aaPredicted RBP28.42■■■□□ 2.14
CCDC107-205ENST00000421582 WASHC4Q2M389 1173 aa28.41■■■□□ 2.14
CCDC107-205ENST00000421582 CWF19L2Q2TBE0 894 aaKnown RBP28.41■■■□□ 2.14
CCDC107-205ENST00000421582 DBNDD1Q9H9R9 158 aa28.41■■■□□ 2.14
CCDC107-205ENST00000421582 C6orf229H3BNL8 230 aa28.4■■■□□ 2.14
CCDC107-205ENST00000421582 RIMBP2O15034 1052 aa28.4■■■□□ 2.14
CCDC107-205ENST00000421582 SLC4A2P04920 1241 aa28.4■■■□□ 2.14
CCDC107-205ENST00000421582 CCDC152Q4G0S7 254 aa28.4■■■□□ 2.14
CCDC107-205ENST00000421582 ADARB2Q9NS39 739 aaKnown RBP28.4■■■□□ 2.14
CCDC107-205ENST00000421582 CDHR2Q9BYE9 1310 aa28.39■■■□□ 2.14
CCDC107-205ENST00000421582 SHTN1A0MZ66 631 aa28.39■■■□□ 2.13
CCDC107-205ENST00000421582 HSP90B1P14625 803 aaKnown RBP28.39■■■□□ 2.13
CCDC107-205ENST00000421582 TBC1D16Q8TBP0 767 aa28.39■■■□□ 2.13
CCDC107-205ENST00000421582 COL13A1Q5TAT6 717 aaPredicted RBP28.38■■■□□ 2.13
CCDC107-205ENST00000421582 SPINK5Q9NQ38 1064 aaPredicted RBP28.38■■■□□ 2.13
CCDC107-205ENST00000421582 NEURL1BA8MQ27 555 aa28.37■■■□□ 2.13
CCDC107-205ENST00000421582 TNIP1Q15025 636 aa28.37■■■□□ 2.13
CCDC107-205ENST00000421582 WDR63Q8IWG1 891 aa28.37■■■□□ 2.13
CCDC107-205ENST00000421582 BCL2L13Q9BXK5 485 aa28.37■■■□□ 2.13
CCDC107-205ENST00000421582 TRAF5O00463 557 aa28.36■■■□□ 2.13
CCDC107-205ENST00000421582 CTSWP56202 376 aa28.36■■■□□ 2.13
CCDC107-205ENST00000421582 FLIIQ13045 1269 aa28.36■■■□□ 2.13
CCDC107-205ENST00000421582 ZBTB12Q9Y330 459 aaPredicted RBP28.36■■■□□ 2.13
CCDC107-205ENST00000421582 PSMD14O00487 310 aa28.35■■■□□ 2.13
CCDC107-205ENST00000421582 VEGFBP49765 207 aa28.35■■■□□ 2.13
CCDC107-205ENST00000421582 NEXNQ0ZGT2 675 aa28.35■■■□□ 2.13
CCDC107-205ENST00000421582 DOK7Q18PE1 504 aa28.35■■■□□ 2.13
CCDC107-205ENST00000421582 FAM9BQ8IZU0 186 aa28.35■■■□□ 2.13
CCDC107-205ENST00000421582 TRPM4Q8TD43 1214 aa28.35■■■□□ 2.13
CCDC107-205ENST00000421582 KCNQ5Q9NR82 932 aa28.35■■■□□ 2.13
CCDC107-205ENST00000421582 PODXL2Q9NZ53 605 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms