RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
SCRN1-204ENST00000421434 BCL2L13Q9BXK5 485 aa12.27□□□□□ -0.45
SCRN1-204ENST00000421434 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.45
SCRN1-204ENST00000421434 VPS33BQ9H267 617 aa12.27□□□□□ -0.45
SCRN1-204ENST00000421434 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.45
SCRN1-204ENST00000421434 LTBP1Q14766 1721 aa12.27□□□□□ -0.45
SCRN1-204ENST00000421434 ECE1P42892 770 aa12.26□□□□□ -0.45
SCRN1-204ENST00000421434 RALBP1Q15311 655 aa12.26□□□□□ -0.45
SCRN1-204ENST00000421434 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
SCRN1-204ENST00000421434 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
SCRN1-204ENST00000421434 ZNF408Q9H9D4 720 aa12.26□□□□□ -0.45
SCRN1-204ENST00000421434 CHPF2Q9P2E5 772 aa12.26□□□□□ -0.45
SCRN1-204ENST00000421434 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
SCRN1-204ENST00000421434 CHL1O00533 1208 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 AOC2O75106 756 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 CELF2O95319 508 aaKnown RBP12.25□□□□□ -0.45
SCRN1-204ENST00000421434 HIRAP54198 1017 aaPredicted RBP12.25□□□□□ -0.45
SCRN1-204ENST00000421434 KIAA2012Q0VF49 1180 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 GRAPQ13588 217 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 TNIP1Q15025 636 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 RTL5Q5HYW3 569 aaPredicted RBP12.25□□□□□ -0.45
SCRN1-204ENST00000421434 GRAPLQ8TC17 118 aaPredicted RBP12.25□□□□□ -0.45
SCRN1-204ENST00000421434 FAM89AQ96GI7 184 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 GLIS2Q9BZE0 524 aaPredicted RBP12.25□□□□□ -0.45
SCRN1-204ENST00000421434 TSKSQ9UJT2 592 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
SCRN1-204ENST00000421434 SHTN1A0MZ66 631 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 YDJCA8MPS7 323 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 ATP5J2-PTCD1G3V325 749 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 DDX10Q13206 875 aaKnown RBP12.24□□□□□ -0.45
SCRN1-204ENST00000421434 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 SAPCD2Q86UD0 394 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 ABHD8Q96I13 439 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
SCRN1-204ENST00000421434 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
SCRN1-204ENST00000421434 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
SCRN1-204ENST00000421434 RIMBP2O15034 1052 aa12.23□□□□□ -0.45
SCRN1-204ENST00000421434 WASHC4Q2M389 1173 aa12.23□□□□□ -0.45
SCRN1-204ENST00000421434 DLK2Q6UY11 383 aa12.23□□□□□ -0.45
SCRN1-204ENST00000421434 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
SCRN1-204ENST00000421434 PLBD2Q8NHP8 589 aa12.23□□□□□ -0.45
SCRN1-204ENST00000421434 TRPM4Q8TD43 1214 aa12.23□□□□□ -0.45
SCRN1-204ENST00000421434 RUNDC1Q96C34 613 aa12.23□□□□□ -0.45
SCRN1-204ENST00000421434 NSFL1CQ9UNZ2 370 aaKnown RBP12.23□□□□□ -0.45
SCRN1-204ENST00000421434 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
SCRN1-204ENST00000421434 H7C1D1 291 aa12.22□□□□□ -0.45
SCRN1-204ENST00000421434 WDR43Q15061 677 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCRN1-204ENST00000421434 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
SCRN1-204ENST00000421434 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
SCRN1-204ENST00000421434 CELF1Q92879 486 aaKnown RBP12.22□□□□□ -0.45
SCRN1-204ENST00000421434 DBNDD1Q9H9R9 158 aa12.22□□□□□ -0.45
SCRN1-204ENST00000421434 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
SCRN1-204ENST00000421434 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
SCRN1-204ENST00000421434 PSMD14O00487 310 aa12.21□□□□□ -0.45
SCRN1-204ENST00000421434 MAP2K2P36507 400 aa12.21□□□□□ -0.45
SCRN1-204ENST00000421434 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
SCRN1-204ENST00000421434 RBM26Q5T8P6 1007 aaKnown RBP12.21□□□□□ -0.45
SCRN1-204ENST00000421434 CDC37L1Q7L3B6 337 aa12.21□□□□□ -0.45
SCRN1-204ENST00000421434 SAMD7Q7Z3H4 446 aa12.21□□□□□ -0.45
SCRN1-204ENST00000421434 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
SCRN1-204ENST00000421434 ISCA1Q9BUE6 129 aa12.21□□□□□ -0.45
SCRN1-204ENST00000421434 KCNQ5Q9NR82 932 aa12.21□□□□□ -0.45
SCRN1-204ENST00000421434 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.45
SCRN1-204ENST00000421434 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
SCRN1-204ENST00000421434 CCDC85CA6NKD9 419 aa12.2□□□□□ -0.46
SCRN1-204ENST00000421434 GPSM2P81274 684 aa12.2□□□□□ -0.46
SCRN1-204ENST00000421434 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
SCRN1-204ENST00000421434 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
SCRN1-204ENST00000421434 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
SCRN1-204ENST00000421434 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
SCRN1-204ENST00000421434 POLLQ9UGP5 575 aa12.2□□□□□ -0.46
SCRN1-204ENST00000421434 TAF1P21675 1872 aa12.19□□□□□ -0.46
SCRN1-204ENST00000421434 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
SCRN1-204ENST00000421434 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
SCRN1-204ENST00000421434 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
SCRN1-204ENST00000421434 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
SCRN1-204ENST00000421434 RIC3Q7Z5B4 369 aa12.19□□□□□ -0.46
SCRN1-204ENST00000421434 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
SCRN1-204ENST00000421434 EGFRP00533 1210 aa12.18□□□□□ -0.46
SCRN1-204ENST00000421434 DPF2Q92785 391 aa12.18□□□□□ -0.46
SCRN1-204ENST00000421434 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
SCRN1-204ENST00000421434 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
SCRN1-204ENST00000421434 ZIC5Q96T25 663 aa12.18□□□□□ -0.46
SCRN1-204ENST00000421434 PHAXQ9H814 394 aaKnown RBP12.18□□□□□ -0.46
SCRN1-204ENST00000421434 MBIPQ9NS73 344 aa12.18□□□□□ -0.46
SCRN1-204ENST00000421434 G3V3G9 751 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 ECE2O60344 883 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 HOXB7P09629 217 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 HUNKP57058 714 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 TBC1D16Q8TBP0 767 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 HHIPL1Q96JK4 782 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
SCRN1-204ENST00000421434 EYA3Q99504 573 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 ZC3H12CQ9C0D7 883 aaKnown RBP12.17□□□□□ -0.46
SCRN1-204ENST00000421434 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
SCRN1-204ENST00000421434 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms