RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 HSPA1BP0DMV9 641 aaKnown RBP22.51■■□□□ 1.19
MSH6-203ENST00000420813 TRIM28Q13263 835 aaKnown RBP22.51■■□□□ 1.19
MSH6-203ENST00000420813 MPNDQ8N594 471 aa22.51■■□□□ 1.19
MSH6-203ENST00000420813 MKRN1Q9UHC7 482 aaKnown RBP22.51■■□□□ 1.19
MSH6-203ENST00000420813 TRPM7Q96QT4 1865 aa22.51■■□□□ 1.19
MSH6-203ENST00000420813 CNTROBQ8N137 903 aa22.5■■□□□ 1.19
MSH6-203ENST00000420813 ZNRF3Q9ULT6 936 aa22.5■■□□□ 1.19
MSH6-203ENST00000420813 DUOX1Q9NRD9 1551 aa22.5■■□□□ 1.19
MSH6-203ENST00000420813 ATP5J2-PTCD1G3V325 749 aa22.49■■□□□ 1.19
MSH6-203ENST00000420813 KIAA2012Q0VF49 1180 aa22.49■■□□□ 1.19
MSH6-203ENST00000420813 SF3B3Q15393 1217 aaKnown RBP22.49■■□□□ 1.19
MSH6-203ENST00000420813 MAP1SQ66K74 1059 aaPredicted RBP22.49■■□□□ 1.19
MSH6-203ENST00000420813 FAM89AQ96GI7 184 aa22.49■■□□□ 1.19
MSH6-203ENST00000420813 EPS15P42566 896 aa22.48■■□□□ 1.19
MSH6-203ENST00000420813 GOLGA2Q08379 1002 aa22.48■■□□□ 1.19
MSH6-203ENST00000420813 COL13A1Q5TAT6 717 aaPredicted RBP22.48■■□□□ 1.19
MSH6-203ENST00000420813 USP50Q70EL3 339 aaPredicted RBP22.48■■□□□ 1.19
MSH6-203ENST00000420813 CHMP4AQ9BY43 222 aa22.48■■□□□ 1.19
MSH6-203ENST00000420813 CXCL9Q07325 125 aa22.46■■□□□ 1.19
MSH6-203ENST00000420813 RIC3Q7Z5B4 369 aa22.46■■□□□ 1.19
MSH6-203ENST00000420813 GPRC5DQ9NZD1 345 aa22.46■■□□□ 1.19
MSH6-203ENST00000420813 CDHR2Q9BYE9 1310 aa22.46■■□□□ 1.19
MSH6-203ENST00000420813 ZNF428Q96B54 188 aa22.45■■□□□ 1.18
MSH6-203ENST00000420813 PHAXQ9H814 394 aaKnown RBP22.45■■□□□ 1.18
MSH6-203ENST00000420813 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
MSH6-203ENST00000420813 IRS4O14654 1257 aaPredicted RBP22.44■■□□□ 1.18
MSH6-203ENST00000420813 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
MSH6-203ENST00000420813 ZBTB38Q8NAP3 1195 aaPredicted RBP22.44■■□□□ 1.18
MSH6-203ENST00000420813 ADARB2Q9NS39 739 aaKnown RBP22.44■■□□□ 1.18
MSH6-203ENST00000420813 CCDC30Q5VVM6 783 aa22.43■■□□□ 1.18
MSH6-203ENST00000420813 CIAPIN1Q6FI81 312 aa22.43■■□□□ 1.18
MSH6-203ENST00000420813 C8orf58Q8NAV2 365 aa22.43■■□□□ 1.18
MSH6-203ENST00000420813 CELF1Q92879 486 aaKnown RBP22.43■■□□□ 1.18
MSH6-203ENST00000420813 COL4A1P02462 1669 aa22.42■■□□□ 1.18
MSH6-203ENST00000420813 CACNA1FO60840 1977 aa22.42■■□□□ 1.18
MSH6-203ENST00000420813 RASSF10A6NK89 507 aa22.42■■□□□ 1.18
MSH6-203ENST00000420813 TNIP1Q15025 636 aa22.42■■□□□ 1.18
MSH6-203ENST00000420813 CCDC191Q8NCU4 936 aa22.42■■□□□ 1.18
MSH6-203ENST00000420813 MYH3P11055 1940 aa22.41■■□□□ 1.18
MSH6-203ENST00000420813 DDX58O95786 925 aaKnown RBP22.41■■□□□ 1.18
MSH6-203ENST00000420813 VEGFBP49765 207 aa22.41■■□□□ 1.18
MSH6-203ENST00000420813 GMPSP49915 693 aaPredicted RBP22.41■■□□□ 1.18
MSH6-203ENST00000420813 CCDC27Q2M243 656 aa22.41■■□□□ 1.18
MSH6-203ENST00000420813 RTL5Q5HYW3 569 aaPredicted RBP22.41■■□□□ 1.18
MSH6-203ENST00000420813 MYD88Q99836 296 aa22.4■■□□□ 1.18
MSH6-203ENST00000420813 NSFL1CQ9UNZ2 370 aaKnown RBP22.4■■□□□ 1.18
MSH6-203ENST00000420813 PCCAP05165 728 aaPredicted RBP22.39■■□□□ 1.17
MSH6-203ENST00000420813 WASHC4Q2M389 1173 aa22.39■■□□□ 1.17
MSH6-203ENST00000420813 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.17
MSH6-203ENST00000420813 CCDC184Q52MB2 194 aa22.39■■□□□ 1.17
MSH6-203ENST00000420813 TNS4Q8IZW8 715 aa22.39■■□□□ 1.17
MSH6-203ENST00000420813 YDJCA8MPS7 323 aa22.38■■□□□ 1.17
MSH6-203ENST00000420813 RAD17O75943 681 aa22.38■■□□□ 1.17
MSH6-203ENST00000420813 RPS8P62241 208 aaKnown RBP22.38■■□□□ 1.17
MSH6-203ENST00000420813 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
MSH6-203ENST00000420813 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
MSH6-203ENST00000420813 BCL2L13Q9BXK5 485 aa22.38■■□□□ 1.17
MSH6-203ENST00000420813 CWC25Q9NXE8 425 aaPredicted RBP22.38■■□□□ 1.17
MSH6-203ENST00000420813 GPSM2P81274 684 aa22.37■■□□□ 1.17
MSH6-203ENST00000420813 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
MSH6-203ENST00000420813 EYA3Q99504 573 aa22.37■■□□□ 1.17
MSH6-203ENST00000420813 PGAP2Q9UHJ9 254 aa22.37■■□□□ 1.17
MSH6-203ENST00000420813 ABT1Q9ULW3 272 aaKnown RBP22.37■■□□□ 1.17
MSH6-203ENST00000420813 THSD7BQ9C0I4 1608 aa22.37■■□□□ 1.17
MSH6-203ENST00000420813 C6orf229H3BNL8 230 aa22.36■■□□□ 1.17
MSH6-203ENST00000420813 PDE8AO60658 829 aa22.36■■□□□ 1.17
MSH6-203ENST00000420813 WWC1Q8IX03 1113 aa22.36■■□□□ 1.17
MSH6-203ENST00000420813 ZC3H15Q8WU90 426 aaKnown RBP22.36■■□□□ 1.17
MSH6-203ENST00000420813 POLLQ9UGP5 575 aa22.36■■□□□ 1.17
MSH6-203ENST00000420813 ZEB1P37275 1124 aaPredicted RBP22.35■■□□□ 1.17
MSH6-203ENST00000420813 CCDC152Q4G0S7 254 aa22.35■■□□□ 1.17
MSH6-203ENST00000420813 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
MSH6-203ENST00000420813 PODXL2Q9NZ53 605 aa22.35■■□□□ 1.17
MSH6-203ENST00000420813 SCN9AQ15858 1988 aa22.35■■□□□ 1.17
MSH6-203ENST00000420813 PSME4Q14997 1843 aa22.35■■□□□ 1.17
MSH6-203ENST00000420813 IL16Q14005 1332 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 FOXN1O15353 648 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 KSR2Q6VAB6 950 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 TBC1D16Q8TBP0 767 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 DPF2Q92785 391 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 AIDAQ96BJ3 306 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 STK31Q9BXU1 1019 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 CNOT7Q9UIV1 285 aaKnown RBP22.34■■□□□ 1.17
MSH6-203ENST00000420813 MAP3K2Q9Y2U5 619 aa22.34■■□□□ 1.17
MSH6-203ENST00000420813 POLR2AP24928 1970 aaKnown RBP22.34■■□□□ 1.17
MSH6-203ENST00000420813 WDR33Q9C0J8 1336 aaKnown RBP22.33■■□□□ 1.17
MSH6-203ENST00000420813 H7C1D1 291 aa22.33■■□□□ 1.17
MSH6-203ENST00000420813 TRAF5O00463 557 aa22.33■■□□□ 1.17
MSH6-203ENST00000420813 FMR1Q06787 632 aaKnown RBP eCLIP22.33■■□□□ 1.172e-6■■□□□ 12
MSH6-203ENST00000420813 CST9Q5W186 159 aa22.33■■□□□ 1.17
MSH6-203ENST00000420813 DBNDD1Q9H9R9 158 aa22.33■■□□□ 1.17
MSH6-203ENST00000420813 SEC31BQ9NQW1 1179 aa22.33■■□□□ 1.17
MSH6-203ENST00000420813 WBP1LQ9NX94 342 aa22.33■■□□□ 1.17
MSH6-203ENST00000420813 PI4KAP2A4QPH2 592 aa22.32■■□□□ 1.16
MSH6-203ENST00000420813 RIMBP2O15034 1052 aa22.32■■□□□ 1.16
MSH6-203ENST00000420813 TWISTNBQ3B726 338 aaPredicted RBP22.32■■□□□ 1.16
MSH6-203ENST00000420813 PI4KAP1Q8N8J0 262 aa22.32■■□□□ 1.16
MSH6-203ENST00000420813 PRDM10Q9NQV6 1147 aa22.32■■□□□ 1.16
MSH6-203ENST00000420813 SPEF2Q9C093 1822 aa22.31■■□□□ 1.16
MSH6-203ENST00000420813 PSMD14O00487 310 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms