RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 GNPATO15228 680 aa25.63■■□□□ 1.69
GPC1-202ENST00000420138 MAP4K4O95819 1239 aaPredicted RBP25.63■■□□□ 1.69
GPC1-202ENST00000420138 CHMLP26374 656 aa25.63■■□□□ 1.69
GPC1-202ENST00000420138 IL15P40933 162 aaPredicted RBP25.63■■□□□ 1.69
GPC1-202ENST00000420138 ILDR1Q86SU0 546 aaPredicted RBP25.63■■□□□ 1.69
GPC1-202ENST00000420138 CCDC85AQ96PX6 553 aaPredicted RBP25.63■■□□□ 1.69
GPC1-202ENST00000420138 BCL2L12Q9HB09 334 aa25.63■■□□□ 1.69
GPC1-202ENST00000420138 NIP7Q9Y221 180 aaKnown RBP eCLIP25.63■■□□□ 1.69
GPC1-202ENST00000420138 ERC2O15083 957 aa25.62■■□□□ 1.69
GPC1-202ENST00000420138 RGL2O15211 777 aa25.62■■□□□ 1.69
GPC1-202ENST00000420138 PDE8AO60658 829 aa25.62■■□□□ 1.69
GPC1-202ENST00000420138 CASC1Q6TDU7 716 aa25.62■■□□□ 1.69
GPC1-202ENST00000420138 DBNLQ9UJU6 430 aaKnown RBP25.62■■□□□ 1.69
GPC1-202ENST00000420138 NTSR2O95665 410 aa25.61■■□□□ 1.69
GPC1-202ENST00000420138 APBA3O96018 575 aa25.61■■□□□ 1.69
GPC1-202ENST00000420138 GPATCH3Q96I76 525 aa25.61■■□□□ 1.69
GPC1-202ENST00000420138 UTP14AQ9BVJ6 771 aaKnown RBP25.61■■□□□ 1.69
GPC1-202ENST00000420138 GREM2Q9H772 168 aa25.61■■□□□ 1.69
GPC1-202ENST00000420138 SH3TC1Q8TE82 1336 aa25.61■■□□□ 1.69
GPC1-202ENST00000420138 SCN7AQ01118 1682 aa25.61■■□□□ 1.69
GPC1-202ENST00000420138 ZNF652Q9Y2D9 606 aa25.6■■□□□ 1.69
GPC1-202ENST00000420138 IFIT5Q13325 482 aaKnown RBP25.6■■□□□ 1.69
GPC1-202ENST00000420138 AK7Q96M32 723 aa25.6■■□□□ 1.69
GPC1-202ENST00000420138 GPR108Q9NPR9 543 aa25.6■■□□□ 1.69
GPC1-202ENST00000420138 FBXO3Q9UK99 471 aa25.6■■□□□ 1.69
GPC1-202ENST00000420138 RTCBQ9Y3I0 505 aaKnown RBP25.6■■□□□ 1.69
GPC1-202ENST00000420138 C4AP0C0L4 1744 aa25.6■■□□□ 1.69
GPC1-202ENST00000420138 UBR3Q6ZT12 1888 aa25.6■■□□□ 1.69
GPC1-202ENST00000420138 EIF5BO60841 1220 aaKnown RBP25.59■■□□□ 1.69
GPC1-202ENST00000420138 TXNRD1Q16881 649 aa25.59■■□□□ 1.69
GPC1-202ENST00000420138 KIF2CQ99661 725 aa25.59■■□□□ 1.69
GPC1-202ENST00000420138 USP26Q9BXU7 913 aa25.59■■□□□ 1.69
GPC1-202ENST00000420138 NARFQ9UHQ1 456 aa25.59■■□□□ 1.69
GPC1-202ENST00000420138 RGPD3A6NKT7 1758 aaPredicted RBP25.59■■□□□ 1.69
GPC1-202ENST00000420138 RGPD4Q7Z3J3 1758 aa25.59■■□□□ 1.69
GPC1-202ENST00000420138 PLSCR1O15162 318 aa25.58■■□□□ 1.69
GPC1-202ENST00000420138 ITGA6P23229 1130 aa25.58■■□□□ 1.69
GPC1-202ENST00000420138 ESYT1Q9BSJ8 1104 aa25.58■■□□□ 1.69
GPC1-202ENST00000420138 DAXXQ9UER7 740 aaPredicted RBP25.58■■□□□ 1.69
GPC1-202ENST00000420138 FAM177BA6PVY3 158 aa25.58■■□□□ 1.68
GPC1-202ENST00000420138 CNTROBQ8N137 903 aa25.58■■□□□ 1.68
GPC1-202ENST00000420138 HCLS1P14317 486 aaPredicted RBP25.57■■□□□ 1.68
GPC1-202ENST00000420138 DBNDD2Q9BQY9 259 aa25.57■■□□□ 1.68
GPC1-202ENST00000420138 SLC4A3P48751 1232 aa25.56■■□□□ 1.68
GPC1-202ENST00000420138 USPL1Q5W0Q7 1092 aa25.56■■□□□ 1.68
GPC1-202ENST00000420138 SRP68Q9UHB9 627 aaKnown RBP25.56■■□□□ 1.68
GPC1-202ENST00000420138 ARHGEF1Q92888 912 aaKnown RBP25.56■■□□□ 1.68
GPC1-202ENST00000420138 IL25Q9H293 177 aa25.56■■□□□ 1.68
GPC1-202ENST00000420138 PROM2Q8N271 834 aa25.55■■□□□ 1.68
GPC1-202ENST00000420138 RIPOR2Q9Y4F9 1068 aa25.55■■□□□ 1.68
GPC1-202ENST00000420138 ATP5JP18859 108 aa25.54■■□□□ 1.68
GPC1-202ENST00000420138 HMGB2P26583 209 aaKnown RBP25.54■■□□□ 1.68
GPC1-202ENST00000420138 TBC1D9BQ66K14 1250 aa25.54■■□□□ 1.68
GPC1-202ENST00000420138 ZNF609O15014 1411 aa25.54■■□□□ 1.68
GPC1-202ENST00000420138 ANKRD18BA2A2Z9 1011 aa25.53■■□□□ 1.68
GPC1-202ENST00000420138 BOLA2Q9H3K6 86 aa25.53■■□□□ 1.68
GPC1-202ENST00000420138 RIC1Q4ADV7 1423 aa25.53■■□□□ 1.68
GPC1-202ENST00000420138 REC8O95072 547 aa25.53■■□□□ 1.68
GPC1-202ENST00000420138 TIMM10P62072 90 aa25.53■■□□□ 1.68
GPC1-202ENST00000420138 MYH3P11055 1940 aa25.52■■□□□ 1.68
GPC1-202ENST00000420138 PHF14O94880 888 aa25.52■■□□□ 1.68
GPC1-202ENST00000420138 TAF7LQ5H9L4 462 aa25.52■■□□□ 1.68
GPC1-202ENST00000420138 EVI5LQ96CN4 794 aa25.52■■□□□ 1.68
GPC1-202ENST00000420138 DDX60Q8IY21 1712 aaKnown RBP25.51■■□□□ 1.67
GPC1-202ENST00000420138 CEP126Q9P2H0 1117 aa25.51■■□□□ 1.67
GPC1-202ENST00000420138 LRP5O75197 1615 aa25.51■■□□□ 1.67
GPC1-202ENST00000420138 ZPR1O75312 459 aa25.51■■□□□ 1.67
GPC1-202ENST00000420138 TRAPPC3LQ5T215 181 aa25.51■■□□□ 1.67
GPC1-202ENST00000420138 A0A1B0GUL7 405 aa25.5■■□□□ 1.67
GPC1-202ENST00000420138 LDHAL6AQ6ZMR3 332 aa25.5■■□□□ 1.67
GPC1-202ENST00000420138 TBC1D2Q9BYX2 928 aa25.49■■□□□ 1.67
GPC1-202ENST00000420138 RTL9Q8NET4 1388 aa25.49■■□□□ 1.67
GPC1-202ENST00000420138 RFC4P35249 363 aa25.49■■□□□ 1.67
GPC1-202ENST00000420138 ERFEQ4G0M1 354 aa25.49■■□□□ 1.67
GPC1-202ENST00000420138 BICDL1Q6ZP65 573 aa25.49■■□□□ 1.67
GPC1-202ENST00000420138 VGLL2Q8N8G2 317 aa25.49■■□□□ 1.67
GPC1-202ENST00000420138 NEUROD6Q96NK8 337 aa25.49■■□□□ 1.67
GPC1-202ENST00000420138 SGSM2O43147 1006 aa25.48■■□□□ 1.67
GPC1-202ENST00000420138 ADRA2BP18089 450 aa25.48■■□□□ 1.67
GPC1-202ENST00000420138 LAMB2P55268 1798 aa25.48■■□□□ 1.67
GPC1-202ENST00000420138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.47■■□□□ 1.67
GPC1-202ENST00000420138 SEC31BQ9NQW1 1179 aa25.47■■□□□ 1.67
GPC1-202ENST00000420138 HSP90B1P14625 803 aaKnown RBP25.47■■□□□ 1.67
GPC1-202ENST00000420138 NBR1Q14596 966 aa25.47■■□□□ 1.67
GPC1-202ENST00000420138 EDC3Q96F86 508 aaKnown RBP25.47■■□□□ 1.67
GPC1-202ENST00000420138 HAUS7Q99871 368 aa25.47■■□□□ 1.67
GPC1-202ENST00000420138 SLC10A5Q5PT55 438 aa25.46■■□□□ 1.67
GPC1-202ENST00000420138 C3orf67Q6ZVT6 689 aa25.46■■□□□ 1.67
GPC1-202ENST00000420138 COL24A1Q17RW2 1714 aa25.45■■□□□ 1.67
GPC1-202ENST00000420138 SSFA2P28290 1259 aa25.45■■□□□ 1.66
GPC1-202ENST00000420138 BECN1Q14457 450 aa25.45■■□□□ 1.66
GPC1-202ENST00000420138 CCDC152Q4G0S7 254 aa25.45■■□□□ 1.66
GPC1-202ENST00000420138 CNNM1Q9NRU3 951 aa25.45■■□□□ 1.66
GPC1-202ENST00000420138 AKAP2Q9Y2D5 859 aa25.45■■□□□ 1.66
GPC1-202ENST00000420138 ABCC12Q96J65 1359 aa25.45■■□□□ 1.66
GPC1-202ENST00000420138 METTL24Q5JXM2 366 aa25.44■■□□□ 1.66
GPC1-202ENST00000420138 SETDB2Q96T68 719 aa25.44■■□□□ 1.66
GPC1-202ENST00000420138 NDUFB9Q9Y6M9 179 aa25.44■■□□□ 1.66
GPC1-202ENST00000420138 ADORA1P30542 326 aa25.44■■□□□ 1.66
GPC1-202ENST00000420138 CWC27Q6UX04 472 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms