RNA–Protein interactions for RNA: ENST00000419249.2

AGRN-202, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-202ENST00000419249 GRAPQ13588 217 aa23.24■■□□□ 1.31
AGRN-202ENST00000419249 SLC4A10Q6U841 1118 aa23.24■■□□□ 1.31
AGRN-202ENST00000419249 UBE3BQ7Z3V4 1068 aa23.24■■□□□ 1.31
AGRN-202ENST00000419249 RTKN2Q8IZC4 609 aa23.24■■□□□ 1.31
AGRN-202ENST00000419249 GRAPLQ8TC17 118 aaPredicted RBP23.24■■□□□ 1.31
AGRN-202ENST00000419249 JARID2Q92833 1246 aaPredicted RBP23.24■■□□□ 1.31
AGRN-202ENST00000419249 API5Q9BZZ5 524 aaKnown RBP23.24■■□□□ 1.31
AGRN-202ENST00000419249 NOB1Q9ULX3 412 aaKnown RBP23.24■■□□□ 1.31
AGRN-202ENST00000419249 CCDC152Q4G0S7 254 aa23.23■■□□□ 1.31
AGRN-202ENST00000419249 RNF181Q9P0P0 153 aa23.23■■□□□ 1.31
AGRN-202ENST00000419249 CCDC88AQ3V6T2 1871 aa23.23■■□□□ 1.31
AGRN-202ENST00000419249 GRM8O00222 908 aa23.22■■□□□ 1.31
AGRN-202ENST00000419249 PPEF1O14829 653 aaPredicted RBP23.22■■□□□ 1.31
AGRN-202ENST00000419249 LMNB1P20700 586 aa23.22■■□□□ 1.31
AGRN-202ENST00000419249 ATP6V0A2Q9Y487 856 aa23.22■■□□□ 1.31
AGRN-202ENST00000419249 PRELPP51888 382 aa23.21■■□□□ 1.31
AGRN-202ENST00000419249 CTSWP56202 376 aa23.21■■□□□ 1.31
AGRN-202ENST00000419249 SP8Q8IXZ3 490 aa23.21■■□□□ 1.31
AGRN-202ENST00000419249 TAOK3Q9H2K8 898 aa23.21■■□□□ 1.31
AGRN-202ENST00000419249 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
AGRN-202ENST00000419249 RTL9Q8NET4 1388 aa23.2■■□□□ 1.3
AGRN-202ENST00000419249 UTYO14607 1347 aa23.2■■□□□ 1.3
AGRN-202ENST00000419249 IPO8O15397 1037 aaKnown RBP23.2■■□□□ 1.3
AGRN-202ENST00000419249 TTLL11Q8NHH1 800 aa23.2■■□□□ 1.3
AGRN-202ENST00000419249 C9orf78Q9NZ63 289 aaPredicted RBP23.2■■□□□ 1.3
AGRN-202ENST00000419249 DICER1Q9UPY3 1922 aaKnown RBP23.2■■□□□ 1.3
AGRN-202ENST00000419249 FKBP4Q02790 459 aaKnown RBP eCLIP23.19■■□□□ 1.3
AGRN-202ENST00000419249 PSMD1Q99460 953 aa23.19■■□□□ 1.3
AGRN-202ENST00000419249 TMX4Q9H1E5 349 aaPredicted RBP23.19■■□□□ 1.3
AGRN-202ENST00000419249 TIAM2Q8IVF5 1701 aa23.19■■□□□ 1.3
AGRN-202ENST00000419249 ZC3H4Q9UPT8 1303 aaKnown RBP23.18■■□□□ 1.3
AGRN-202ENST00000419249 BCAR3O75815 825 aa23.18■■□□□ 1.3
AGRN-202ENST00000419249 CSF1RP07333 972 aa23.18■■□□□ 1.3
AGRN-202ENST00000419249 CCT4P50991 539 aaKnown RBP23.18■■□□□ 1.3
AGRN-202ENST00000419249 RPS8P62241 208 aaKnown RBP23.18■■□□□ 1.3
AGRN-202ENST00000419249 OLFM4Q6UX06 510 aa23.18■■□□□ 1.3
AGRN-202ENST00000419249 CELF1Q92879 486 aaKnown RBP23.17■■□□□ 1.3
AGRN-202ENST00000419249 ZNF526Q8TF50 670 aaPredicted RBP23.16■■□□□ 1.3
AGRN-202ENST00000419249 GPBP1L1Q9HC44 474 aaPredicted RBP23.16■■□□□ 1.3
AGRN-202ENST00000419249 ATF7IPQ6VMQ6 1270 aa23.15■■□□□ 1.3
AGRN-202ENST00000419249 CDC5LQ99459 802 aaKnown RBP23.15■■□□□ 1.3
AGRN-202ENST00000419249 SEC31BQ9NQW1 1179 aa23.15■■□□□ 1.3
AGRN-202ENST00000419249 MYH3P11055 1940 aa23.15■■□□□ 1.3
AGRN-202ENST00000419249 TAF1P21675 1872 aa23.15■■□□□ 1.3
AGRN-202ENST00000419249 FOXO4P98177 505 aa23.14■■□□□ 1.29
AGRN-202ENST00000419249 RTFDC1Q9BY42 306 aaPredicted RBP23.14■■□□□ 1.29
AGRN-202ENST00000419249 USP44Q9H0E7 712 aa23.14■■□□□ 1.29
AGRN-202ENST00000419249 GREM2Q9H772 168 aa23.14■■□□□ 1.29
AGRN-202ENST00000419249 NBPF7P0C2Y1 421 aaPredicted RBP23.13■■□□□ 1.29
AGRN-202ENST00000419249 TRIM27P14373 513 aa23.13■■□□□ 1.29
AGRN-202ENST00000419249 INTS3Q68E01 1043 aaKnown RBP23.13■■□□□ 1.29
AGRN-202ENST00000419249 VPS33BQ9H267 617 aa23.13■■□□□ 1.29
AGRN-202ENST00000419249 ZKSCAN2Q63HK3 967 aa23.12■■□□□ 1.29
AGRN-202ENST00000419249 ANKRD18AQ8IVF6 992 aa23.12■■□□□ 1.29
AGRN-202ENST00000419249 CCDC85AQ96PX6 553 aaPredicted RBP23.12■■□□□ 1.29
AGRN-202ENST00000419249 SLC51AQ86UW1 340 aa23.11■■□□□ 1.29
AGRN-202ENST00000419249 MPNDQ8N594 471 aa23.11■■□□□ 1.29
AGRN-202ENST00000419249 SUPT20HQ8NEM7 779 aa23.11■■□□□ 1.29
AGRN-202ENST00000419249 LRRC37AA6NMS7 1700 aa23.11■■□□□ 1.29
AGRN-202ENST00000419249 ITGA6P23229 1130 aa23.1■■□□□ 1.29
AGRN-202ENST00000419249 EPHA10Q5JZY3 1008 aa23.1■■□□□ 1.29
AGRN-202ENST00000419249 DPP8Q6V1X1 898 aaPredicted RBP23.1■■□□□ 1.29
AGRN-202ENST00000419249 FRAT1Q92837 279 aaPredicted RBP23.1■■□□□ 1.29
AGRN-202ENST00000419249 KAZALD1Q96I82 304 aa23.1■■□□□ 1.29
AGRN-202ENST00000419249 SUCLG2Q96I99 432 aa23.1■■□□□ 1.29
AGRN-202ENST00000419249 ZNF277Q9NRM2 450 aaPredicted RBP23.1■■□□□ 1.29
AGRN-202ENST00000419249 BSDC1Q9NW68 430 aaPredicted RBP23.1■■□□□ 1.29
AGRN-202ENST00000419249 IARSP41252 1262 aaKnown RBP23.09■■□□□ 1.29
AGRN-202ENST00000419249 FAM161AQ3B820 660 aa23.09■■□□□ 1.29
AGRN-202ENST00000419249 LMBR1LQ6UX01 489 aa23.09■■□□□ 1.29
AGRN-202ENST00000419249 HDAC5Q9UQL6 1122 aa23.09■■□□□ 1.29
AGRN-202ENST00000419249 COL4A1P02462 1669 aa23.09■■□□□ 1.29
AGRN-202ENST00000419249 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.29
AGRN-202ENST00000419249 RABL6Q3YEC7 729 aaPredicted RBP23.08■■□□□ 1.29
AGRN-202ENST00000419249 PODXL2Q9NZ53 605 aa23.08■■□□□ 1.29
AGRN-202ENST00000419249 ANKRD18BA2A2Z9 1011 aa23.07■■□□□ 1.28
AGRN-202ENST00000419249 IGHMBP2P38935 993 aaKnown RBP23.07■■□□□ 1.28
AGRN-202ENST00000419249 IFIT5Q13325 482 aaKnown RBP23.07■■□□□ 1.28
AGRN-202ENST00000419249 GLTPD2A6NH11 291 aa23.06■■□□□ 1.28
AGRN-202ENST00000419249 NSFL1CQ9UNZ2 370 aaKnown RBP23.06■■□□□ 1.28
AGRN-202ENST00000419249 KIF3CO14782 793 aa23.05■■□□□ 1.28
AGRN-202ENST00000419249 NMRK2Q9NPI5 230 aa23.05■■□□□ 1.28
AGRN-202ENST00000419249 RCAN3Q9UKA8 241 aa23.05■■□□□ 1.28
AGRN-202ENST00000419249 UBTFL1P0CB47 393 aaPredicted RBP23.04■■□□□ 1.28
AGRN-202ENST00000419249 GPSM2P81274 684 aa23.04■■□□□ 1.28
AGRN-202ENST00000419249 CCDC57Q2TAC2 916 aa23.04■■□□□ 1.28
AGRN-202ENST00000419249 ANKRD44Q8N8A2 993 aa23.04■■□□□ 1.28
AGRN-202ENST00000419249 JDP2Q8WYK2 163 aa23.04■■□□□ 1.28
AGRN-202ENST00000419249 MPHOSPH8Q99549 860 aa23.04■■□□□ 1.28
AGRN-202ENST00000419249 BICC1Q9H694 974 aaKnown RBP23.04■■□□□ 1.28
AGRN-202ENST00000419249 GNAI3P08754 354 aa23.03■■□□□ 1.28
AGRN-202ENST00000419249 KIAA2012Q0VF49 1180 aa23.03■■□□□ 1.28
AGRN-202ENST00000419249 DPY19L2Q6NUT2 758 aa23.03■■□□□ 1.28
AGRN-202ENST00000419249 MINPP1Q9UNW1 487 aa23.03■■□□□ 1.28
AGRN-202ENST00000419249 CHMP3Q9Y3E7 222 aa23.03■■□□□ 1.28
AGRN-202ENST00000419249 XDHP47989 1333 aa23.03■■□□□ 1.28
AGRN-202ENST00000419249 DUOX1Q9NRD9 1551 aa23.02■■□□□ 1.28
AGRN-202ENST00000419249 FZD9O00144 591 aa23.02■■□□□ 1.28
AGRN-202ENST00000419249 PPIP5K2O43314 1243 aa23.02■■□□□ 1.28
AGRN-202ENST00000419249 MS4A1P11836 297 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms