RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 POTECB2RU33 542 aa26.43■■□□□ 1.82
PKNOX1-202ENST00000418336 LTBP1Q14766 1721 aa26.42■■□□□ 1.82
PKNOX1-202ENST00000418336 CDHR2Q9BYE9 1310 aa26.42■■□□□ 1.82
PKNOX1-202ENST00000418336 BBOX1O75936 387 aa26.42■■□□□ 1.82
PKNOX1-202ENST00000418336 CELF1Q92879 486 aaKnown RBP26.42■■□□□ 1.82
PKNOX1-202ENST00000418336 CASP7P55210 303 aa26.41■■□□□ 1.82
PKNOX1-202ENST00000418336 KDM2BQ8NHM5 1336 aa26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 H7C1W4 665 aa26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 IARSP41252 1262 aaKnown RBP26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 FKBP5Q13451 457 aaPredicted RBP26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 DDX46Q7L014 1031 aaKnown RBP26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 SP8Q8IXZ3 490 aa26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 DNAAF4Q8WXU2 420 aa26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 RTFDC1Q9BY42 306 aaPredicted RBP26.4■■□□□ 1.82
PKNOX1-202ENST00000418336 GRIPAP1Q4V328 841 aa26.39■■□□□ 1.82
PKNOX1-202ENST00000418336 RRAGCQ9HB90 399 aa26.39■■□□□ 1.82
PKNOX1-202ENST00000418336 F6X3S4 739 aa26.38■■□□□ 1.81
PKNOX1-202ENST00000418336 GCKRQ14397 625 aa26.38■■□□□ 1.81
PKNOX1-202ENST00000418336 ZNF541Q9H0D2 1346 aa26.38■■□□□ 1.81
PKNOX1-202ENST00000418336 FZD9O00144 591 aa26.37■■□□□ 1.81
PKNOX1-202ENST00000418336 PDE8AO60658 829 aa26.37■■□□□ 1.81
PKNOX1-202ENST00000418336 BEND3Q5T5X7 828 aa26.37■■□□□ 1.81
PKNOX1-202ENST00000418336 SEC31BQ9NQW1 1179 aa26.37■■□□□ 1.81
PKNOX1-202ENST00000418336 MRPL50Q8N5N7 158 aaKnown RBP26.36■■□□□ 1.81
PKNOX1-202ENST00000418336 LINS1Q8NG48 757 aa26.36■■□□□ 1.81
PKNOX1-202ENST00000418336 MYH3P11055 1940 aa26.35■■□□□ 1.81
PKNOX1-202ENST00000418336 NEXNQ0ZGT2 675 aa26.35■■□□□ 1.81
PKNOX1-202ENST00000418336 DDNO94850 711 aaPredicted RBP26.34■■□□□ 1.81
PKNOX1-202ENST00000418336 TOMM70O94826 608 aa26.33■■□□□ 1.81
PKNOX1-202ENST00000418336 TMC4Q7Z404 712 aa26.33■■□□□ 1.81
PKNOX1-202ENST00000418336 TTLL11Q8NHH1 800 aa26.33■■□□□ 1.81
PKNOX1-202ENST00000418336 SSH1Q8WYL5 1049 aa26.33■■□□□ 1.81
PKNOX1-202ENST00000418336 PLA2G12BQ9BX93 195 aa26.33■■□□□ 1.81
PKNOX1-202ENST00000418336 CTSWP56202 376 aa26.32■■□□□ 1.8
PKNOX1-202ENST00000418336 L3MBTL3Q96JM7 780 aaPredicted RBP26.32■■□□□ 1.8
PKNOX1-202ENST00000418336 RTL9Q8NET4 1388 aa26.32■■□□□ 1.8
PKNOX1-202ENST00000418336 UBE3BQ7Z3V4 1068 aa26.31■■□□□ 1.8
PKNOX1-202ENST00000418336 RPS8P62241 208 aaKnown RBP26.3■■□□□ 1.8
PKNOX1-202ENST00000418336 DPY19L2Q6NUT2 758 aa26.3■■□□□ 1.8
PKNOX1-202ENST00000418336 MPNDQ8N594 471 aa26.3■■□□□ 1.8
PKNOX1-202ENST00000418336 RBM46Q8TBY0 533 aaKnown RBP26.3■■□□□ 1.8
PKNOX1-202ENST00000418336 VPS33BQ9H267 617 aa26.3■■□□□ 1.8
PKNOX1-202ENST00000418336 HSP90B1P14625 803 aaKnown RBP26.29■■□□□ 1.8
PKNOX1-202ENST00000418336 AOC3Q16853 763 aa26.29■■□□□ 1.8
PKNOX1-202ENST00000418336 CCDC152Q4G0S7 254 aa26.29■■□□□ 1.8
PKNOX1-202ENST00000418336 DPP8Q6V1X1 898 aaPredicted RBP26.29■■□□□ 1.8
PKNOX1-202ENST00000418336 CCDC85AQ96PX6 553 aaPredicted RBP26.29■■□□□ 1.8
PKNOX1-202ENST00000418336 CEP350Q5VT06 3117 aa26.29■■□□□ 1.8
PKNOX1-202ENST00000418336 CSF1RP07333 972 aa26.28■■□□□ 1.8
PKNOX1-202ENST00000418336 VEGFAP15692 232 aaPredicted RBP26.28■■□□□ 1.8
PKNOX1-202ENST00000418336 GPSM2P81274 684 aa26.28■■□□□ 1.8
PKNOX1-202ENST00000418336 KIAA2012Q0VF49 1180 aa26.27■■□□□ 1.8
PKNOX1-202ENST00000418336 GREM2Q9H772 168 aa26.27■■□□□ 1.8
PKNOX1-202ENST00000418336 POLLQ9UGP5 575 aa26.27■■□□□ 1.8
PKNOX1-202ENST00000418336 SCN4AP35499 1836 aa26.27■■□□□ 1.8
PKNOX1-202ENST00000418336 LARGE2Q8N3Y3 721 aa26.26■■□□□ 1.79
PKNOX1-202ENST00000418336 ADAMTSL1Q8N6G6 1762 aa26.25■■□□□ 1.79
PKNOX1-202ENST00000418336 PPIP5K2O43314 1243 aa26.25■■□□□ 1.79
PKNOX1-202ENST00000418336 FOXO4P98177 505 aa26.25■■□□□ 1.79
PKNOX1-202ENST00000418336 ALDH1L2Q3SY69 923 aa26.25■■□□□ 1.79
PKNOX1-202ENST00000418336 PODXL2Q9NZ53 605 aa26.25■■□□□ 1.79
PKNOX1-202ENST00000418336 SUPT20HQ8NEM7 779 aa26.24■■□□□ 1.79
PKNOX1-202ENST00000418336 BCL2L13Q9BXK5 485 aa26.24■■□□□ 1.79
PKNOX1-202ENST00000418336 SPEF2Q9C093 1822 aa26.23■■□□□ 1.79
PKNOX1-202ENST00000418336 HSPA6P17066 643 aa26.23■■□□□ 1.79
PKNOX1-202ENST00000418336 EPHA10Q5JZY3 1008 aa26.23■■□□□ 1.79
PKNOX1-202ENST00000418336 GPC2Q8N158 579 aa26.23■■□□□ 1.79
PKNOX1-202ENST00000418336 JDP2Q8WYK2 163 aa26.23■■□□□ 1.79
PKNOX1-202ENST00000418336 PTPRCP08575 1304 aa26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 ALDH1L1O75891 902 aa26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 CT47B1P0C2W7 299 aaPredicted RBP26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 POTEIP0CG38 1075 aa26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 POTEJP0CG39 1038 aa26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 TBC1D16Q8TBP0 767 aa26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 KAZALD1Q96I82 304 aa26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 TMX4Q9H1E5 349 aaPredicted RBP26.22■■□□□ 1.79
PKNOX1-202ENST00000418336 UTYO14607 1347 aa26.21■■□□□ 1.79
PKNOX1-202ENST00000418336 YDJCA8MPS7 323 aa26.21■■□□□ 1.79
PKNOX1-202ENST00000418336 BRPF1P55201 1214 aaPredicted RBP26.21■■□□□ 1.79
PKNOX1-202ENST00000418336 NSFL1CQ9UNZ2 370 aaKnown RBP26.21■■□□□ 1.79
PKNOX1-202ENST00000418336 GRM8O00222 908 aa26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 FSTL1Q12841 308 aa26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 FAM161AQ3B820 660 aa26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 ANKRD18AQ8IVF6 992 aa26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 NIM1KQ8IY84 436 aa26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 GPR101Q96P66 508 aaPredicted RBP26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 SRCIN1Q9C0H9 1055 aa26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 TAF1DQ9H5J8 278 aaPredicted RBP26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 ZNRF3Q9ULT6 936 aa26.2■■□□□ 1.78
PKNOX1-202ENST00000418336 WTIPA6NIX2 430 aaPredicted RBP26.19■■□□□ 1.78
PKNOX1-202ENST00000418336 SCNN1DP51172 638 aa26.19■■□□□ 1.78
PKNOX1-202ENST00000418336 BSDC1Q9NW68 430 aaPredicted RBP26.19■■□□□ 1.78
PKNOX1-202ENST00000418336 CXCL9Q07325 125 aa26.18■■□□□ 1.78
PKNOX1-202ENST00000418336 SLC4A10Q6U841 1118 aa26.18■■□□□ 1.78
PKNOX1-202ENST00000418336 C16orf71Q8IYS4 520 aaPredicted RBP26.18■■□□□ 1.78
PKNOX1-202ENST00000418336 MINPP1Q9UNW1 487 aa26.18■■□□□ 1.78
PKNOX1-202ENST00000418336 ITGA6P23229 1130 aa26.17■■□□□ 1.78
PKNOX1-202ENST00000418336 RARSP54136 660 aaKnown RBP26.17■■□□□ 1.78
PKNOX1-202ENST00000418336 EIF6P56537 245 aaKnown RBP26.17■■□□□ 1.78
PKNOX1-202ENST00000418336 CDC5LQ99459 802 aaKnown RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms