RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-208	ENST00000417285	CLEC11A	Q9Y240	323 aa		32.68	■■■□□ 2.82
VEGFA-208	ENST00000417285	CREBZF	Q9NS37	354 aa		32.67	■■■□□ 2.82
VEGFA-208	ENST00000417285	DDX58	O95786	925 aa	Known RBP	32.66	■■■□□ 2.82
VEGFA-208	ENST00000417285	LMOD1	P29536	600 aa	Predicted RBP	32.66	■■■□□ 2.82
VEGFA-208	ENST00000417285	SLC51A	Q86UW1	340 aa		32.66	■■■□□ 2.82
VEGFA-208	ENST00000417285	WWC1	Q8IX03	1113 aa		32.66	■■■□□ 2.82
VEGFA-208	ENST00000417285	ZNF428	Q96B54	188 aa		32.66	■■■□□ 2.82
VEGFA-208	ENST00000417285	IRS4	O14654	1257 aa	Predicted RBP	32.65	■■■□□ 2.82
VEGFA-208	ENST00000417285	AOC3	Q16853	763 aa		32.65	■■■□□ 2.82
VEGFA-208	ENST00000417285	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.65	■■■□□ 2.82
VEGFA-208	ENST00000417285	ZNRF3	Q9ULT6	936 aa		32.65	■■■□□ 2.82
VEGFA-208	ENST00000417285	CCDC191	Q8NCU4	936 aa		32.64	■■■□□ 2.82
VEGFA-208	ENST00000417285	IL16	Q14005	1332 aa		32.62	■■■□□ 2.81
VEGFA-208	ENST00000417285	PASK	Q96RG2	1323 aa		32.62	■■■□□ 2.81
VEGFA-208	ENST00000417285	ITGBL1	O95965	494 aa	Predicted RBP	32.62	■■■□□ 2.81
VEGFA-208	ENST00000417285	KIAA2012	Q0VF49	1180 aa		32.62	■■■□□ 2.81
VEGFA-208	ENST00000417285	TSPYL6	Q8N831	410 aa		32.62	■■■□□ 2.81
VEGFA-208	ENST00000417285	RTL5	Q5HYW3	569 aa	Predicted RBP	32.61	■■■□□ 2.81
VEGFA-208	ENST00000417285	MYD88	Q99836	296 aa		32.61	■■■□□ 2.81
VEGFA-208	ENST00000417285	METTL22	Q9BUU2	404 aa	Predicted RBP	32.61	■■■□□ 2.81
VEGFA-208	ENST00000417285	COL4A5	P29400	1685 aa		32.61	■■■□□ 2.81
VEGFA-208	ENST00000417285	IFFO2	Q5TF58	517 aa		32.6	■■■□□ 2.81
VEGFA-208	ENST00000417285	TSR2	Q969E8	191 aa	Known RBP	32.6	■■■□□ 2.81
VEGFA-208	ENST00000417285	STK31	Q9BXU1	1019 aa		32.6	■■■□□ 2.81
VEGFA-208	ENST00000417285	CNTROB	Q8N137	903 aa		32.59	■■■□□ 2.81
VEGFA-208	ENST00000417285	PCCA	P05165	728 aa	Predicted RBP	32.58	■■■□□ 2.81
VEGFA-208	ENST00000417285	SCNN1D	P51172	638 aa		32.58	■■■□□ 2.81
VEGFA-208	ENST00000417285	CXCL9	Q07325	125 aa		32.58	■■■□□ 2.81
VEGFA-208	ENST00000417285	CWC25	Q9NXE8	425 aa	Predicted RBP	32.58	■■■□□ 2.81
VEGFA-208	ENST00000417285	EPS15	P42566	896 aa		32.57	■■■□□ 2.8
VEGFA-208	ENST00000417285	RPS8	P62241	208 aa	Known RBP	32.57	■■■□□ 2.8
VEGFA-208	ENST00000417285	KSR2	Q6VAB6	950 aa		32.57	■■■□□ 2.8
VEGFA-208	ENST00000417285	USP50	Q70EL3	339 aa	Predicted RBP	32.57	■■■□□ 2.8
VEGFA-208	ENST00000417285	CELF1	Q92879	486 aa	Known RBP	32.57	■■■□□ 2.8
VEGFA-208	ENST00000417285	TNIP1	Q15025	636 aa		32.56	■■■□□ 2.8
VEGFA-208	ENST00000417285	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.56	■■■□□ 2.8
VEGFA-208	ENST00000417285	LAMB2	P55268	1798 aa		32.55	■■■□□ 2.8
VEGFA-208	ENST00000417285	PCNT	O95613	3336 aa		32.55	■■■□□ 2.8
VEGFA-208	ENST00000417285	TMEM88B	A6NKF7	163 aa		32.55	■■■□□ 2.8
VEGFA-208	ENST00000417285	TWISTNB	Q3B726	338 aa	Predicted RBP	32.55	■■■□□ 2.8
VEGFA-208	ENST00000417285	MAP3K2	Q9Y2U5	619 aa		32.55	■■■□□ 2.8
VEGFA-208	ENST00000417285	MAP1S	Q66K74	1059 aa	Predicted RBP	32.54	■■■□□ 2.8
VEGFA-208	ENST00000417285	CIAPIN1	Q6FI81	312 aa		32.54	■■■□□ 2.8
VEGFA-208	ENST00000417285	WASHC4	Q2M389	1173 aa		32.53	■■■□□ 2.8
VEGFA-208	ENST00000417285	WDR63	Q8IWG1	891 aa		32.53	■■■□□ 2.8
VEGFA-208	ENST00000417285	GPRC5D	Q9NZD1	345 aa		32.53	■■■□□ 2.8
VEGFA-208	ENST00000417285	PI4KAP2	A4QPH2	592 aa		32.52	■■■□□ 2.8
VEGFA-208	ENST00000417285	PDE8A	O60658	829 aa		32.52	■■■□□ 2.8
VEGFA-208	ENST00000417285	NEXN	Q0ZGT2	675 aa		32.52	■■■□□ 2.8
VEGFA-208	ENST00000417285	CCDC152	Q4G0S7	254 aa		32.52	■■■□□ 2.8
VEGFA-208	ENST00000417285	PI4KAP1	Q8N8J0	262 aa		32.52	■■■□□ 2.8
VEGFA-208	ENST00000417285	ADARB2	Q9NS39	739 aa	Known RBP	32.52	■■■□□ 2.8
VEGFA-208	ENST00000417285	SLC4A2	P04920	1241 aa		32.5	■■■□□ 2.79
VEGFA-208	ENST00000417285	MKRN1	Q9UHC7	482 aa	Known RBP	32.5	■■■□□ 2.79
VEGFA-208	ENST00000417285	CDHR2	Q9BYE9	1310 aa		32.5	■■■□□ 2.79
VEGFA-208	ENST00000417285	DDX60	Q8IY21	1712 aa	Known RBP	32.49	■■■□□ 2.79
VEGFA-208	ENST00000417285	C6orf229	H3BNL8	230 aa		32.49	■■■□□ 2.79
VEGFA-208	ENST00000417285	EYA3	Q99504	573 aa		32.49	■■■□□ 2.79
VEGFA-208	ENST00000417285	RAD17	O75943	681 aa		32.48	■■■□□ 2.79
VEGFA-208	ENST00000417285	GMPS	P49915	693 aa	Predicted RBP	32.48	■■■□□ 2.79
VEGFA-208	ENST00000417285	GPSM2	P81274	684 aa		32.48	■■■□□ 2.79
VEGFA-208	ENST00000417285	ADAMTSL1	Q8N6G6	1762 aa		32.47	■■■□□ 2.79
VEGFA-208	ENST00000417285	BCL2L13	Q9BXK5	485 aa		32.47	■■■□□ 2.79
VEGFA-208	ENST00000417285	POLL	Q9UGP5	575 aa		32.47	■■■□□ 2.79
VEGFA-208	ENST00000417285	SEC31B	Q9NQW1	1179 aa		32.46	■■■□□ 2.79
VEGFA-208	ENST00000417285	PODXL2	Q9NZ53	605 aa		32.46	■■■□□ 2.79
VEGFA-208	ENST00000417285	SALL2	Q9Y467	1007 aa	Predicted RBP	32.46	■■■□□ 2.79
VEGFA-208	ENST00000417285	CNTNAP1	P78357	1384 aa		32.45	■■■□□ 2.79
VEGFA-208	ENST00000417285	IGKV5-2	P06315	115 aa		32.45	■■■□□ 2.79
VEGFA-208	ENST00000417285	FAM9B	Q8IZU0	186 aa		32.45	■■■□□ 2.79
VEGFA-208	ENST00000417285	JARID2	Q92833	1246 aa	Predicted RBP	32.45	■■■□□ 2.79
VEGFA-208	ENST00000417285	YDJC	A8MPS7	323 aa		32.44	■■■□□ 2.78
VEGFA-208	ENST00000417285	TBC1D16	Q8TBP0	767 aa		32.44	■■■□□ 2.78
VEGFA-208	ENST00000417285	TAF1	P21675	1872 aa		32.44	■■■□□ 2.78
VEGFA-208	ENST00000417285	RIMBP2	O15034	1052 aa		32.43	■■■□□ 2.78
VEGFA-208	ENST00000417285	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.43	■■■□□ 2.78
VEGFA-208	ENST00000417285	FANCI	Q9NVI1	1328 aa		32.43	■■■□□ 2.78
VEGFA-208	ENST00000417285	HSPA1A	P0DMV8	641 aa	Known RBP	32.42	■■■□□ 2.78
VEGFA-208	ENST00000417285	HSPA1B	P0DMV9	641 aa	Known RBP	32.42	■■■□□ 2.78
VEGFA-208	ENST00000417285	G2E3	Q7L622	706 aa		32.42	■■■□□ 2.78
VEGFA-208	ENST00000417285	ZC3H15	Q8WU90	426 aa	Known RBP	32.42	■■■□□ 2.78
VEGFA-208	ENST00000417285	DPF2	Q92785	391 aa		32.42	■■■□□ 2.78
VEGFA-208	ENST00000417285	ANKIB1	Q9P2G1	1089 aa		32.42	■■■□□ 2.78
VEGFA-208	ENST00000417285	LRRC37A	A6NMS7	1700 aa		32.41	■■■□□ 2.78
VEGFA-208	ENST00000417285	LTBP1	Q14766	1721 aa		32.41	■■■□□ 2.78
VEGFA-208	ENST00000417285		H7C1D1	291 aa		32.41	■■■□□ 2.78
VEGFA-208	ENST00000417285	ANKRD18A	Q8IVF6	992 aa		32.41	■■■□□ 2.78
VEGFA-208	ENST00000417285	PGAP2	Q9UHJ9	254 aa		32.41	■■■□□ 2.78
VEGFA-208	ENST00000417285	CNOT7	Q9UIV1	285 aa	Known RBP	32.41	■■■□□ 2.78
VEGFA-208	ENST00000417285	NEURL1B	A8MQ27	555 aa		32.4	■■■□□ 2.78
VEGFA-208	ENST00000417285	VAMP4	O75379	141 aa		32.4	■■■□□ 2.78
VEGFA-208	ENST00000417285	FLII	Q13045	1269 aa		32.4	■■■□□ 2.78
VEGFA-208	ENST00000417285	DEFB115	Q30KQ5	88 aa		32.4	■■■□□ 2.78
VEGFA-208	ENST00000417285	DBNDD1	Q9H9R9	158 aa		32.4	■■■□□ 2.78
VEGFA-208	ENST00000417285	DUOX1	Q9NRD9	1551 aa		32.4	■■■□□ 2.78
VEGFA-208	ENST00000417285		H7C1W4	665 aa		32.39	■■■□□ 2.78
VEGFA-208	ENST00000417285	CTSW	P56202	376 aa		32.39	■■■□□ 2.78
VEGFA-208	ENST00000417285	CDC5L	Q99459	802 aa	Known RBP	32.39	■■■□□ 2.78
VEGFA-208	ENST00000417285	GGA1	Q9UJY5	639 aa		32.39	■■■□□ 2.78
VEGFA-208	ENST00000417285	RASSF10	A6NK89	507 aa		32.38	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms