RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
ACTB-203ENST00000417101 CNTROBQ8N137 903 aa28.27■■■□□ 2.12
ACTB-203ENST00000417101 MPNDQ8N594 471 aa28.27■■■□□ 2.12
ACTB-203ENST00000417101 TMEM88BA6NKF7 163 aa28.26■■■□□ 2.11
ACTB-203ENST00000417101 EPS15P42566 896 aa28.26■■■□□ 2.11
ACTB-203ENST00000417101 CNTNAP1P78357 1384 aa28.24■■■□□ 2.11
ACTB-203ENST00000417101 RTL5Q5HYW3 569 aaPredicted RBP28.24■■■□□ 2.11
ACTB-203ENST00000417101 ZNRF3Q9ULT6 936 aa28.24■■■□□ 2.11
ACTB-203ENST00000417101 LTBP1Q14766 1721 aa28.23■■■□□ 2.11
ACTB-203ENST00000417101 RIC3Q7Z5B4 369 aa28.23■■■□□ 2.11
ACTB-203ENST00000417101 CXCL9Q07325 125 aa28.22■■■□□ 2.11
ACTB-203ENST00000417101 GOLGA2Q08379 1002 aa28.22■■■□□ 2.11
ACTB-203ENST00000417101 TRIM28Q13263 835 aaKnown RBP28.22■■■□□ 2.11
ACTB-203ENST00000417101 TMC4Q7Z404 712 aa28.22■■■□□ 2.11
ACTB-203ENST00000417101 PHAXQ9H814 394 aaKnown RBP28.22■■■□□ 2.11
ACTB-203ENST00000417101 KIAA2012Q0VF49 1180 aa28.21■■■□□ 2.11
ACTB-203ENST00000417101 SF3B3Q15393 1217 aaKnown RBP28.21■■■□□ 2.11
ACTB-203ENST00000417101 C8orf58Q8NAV2 365 aa28.21■■■□□ 2.11
ACTB-203ENST00000417101 USP50Q70EL3 339 aaPredicted RBP28.2■■■□□ 2.1
ACTB-203ENST00000417101 TAF1P21675 1872 aa28.2■■■□□ 2.1
ACTB-203ENST00000417101 DDX60Q8IY21 1712 aaKnown RBP28.2■■■□□ 2.1
ACTB-203ENST00000417101 IRS4O14654 1257 aaPredicted RBP28.19■■■□□ 2.1
ACTB-203ENST00000417101 CCDC184Q52MB2 194 aa28.19■■■□□ 2.1
ACTB-203ENST00000417101 CELF1Q92879 486 aaKnown RBP28.19■■■□□ 2.1
ACTB-203ENST00000417101 GPRC5DQ9NZD1 345 aa28.19■■■□□ 2.1
ACTB-203ENST00000417101 VEGFBP49765 207 aa28.17■■■□□ 2.1
ACTB-203ENST00000417101 GMPSP49915 693 aaPredicted RBP28.17■■■□□ 2.1
ACTB-203ENST00000417101 CIAPIN1Q6FI81 312 aa28.17■■■□□ 2.1
ACTB-203ENST00000417101 RAD17O75943 681 aa28.16■■■□□ 2.1
ACTB-203ENST00000417101 MYD88Q99836 296 aa28.16■■■□□ 2.1
ACTB-203ENST00000417101 ADARB2Q9NS39 739 aaKnown RBP28.16■■■□□ 2.1
ACTB-203ENST00000417101 ZBTB38Q8NAP3 1195 aaPredicted RBP28.15■■■□□ 2.1
ACTB-203ENST00000417101 NSFL1CQ9UNZ2 370 aaKnown RBP28.15■■■□□ 2.1
ACTB-203ENST00000417101 DUOX1Q9NRD9 1551 aa28.15■■■□□ 2.1
ACTB-203ENST00000417101 FMR1Q06787 632 aaKnown RBP eCLIP28.14■■■□□ 2.11e-75■□□□□ 8.1
ACTB-203ENST00000417101 CCDC30Q5VVM6 783 aa28.14■■■□□ 2.1
ACTB-203ENST00000417101 TNS4Q8IZW8 715 aa28.14■■■□□ 2.1
ACTB-203ENST00000417101 TNIP1Q15025 636 aa28.13■■■□□ 2.09
ACTB-203ENST00000417101 TSPYL6Q8N831 410 aa28.13■■■□□ 2.09
ACTB-203ENST00000417101 BCL2L13Q9BXK5 485 aa28.13■■■□□ 2.09
ACTB-203ENST00000417101 ABT1Q9ULW3 272 aaKnown RBP28.13■■■□□ 2.09
ACTB-203ENST00000417101 LRRC37AA6NMS7 1700 aa28.12■■■□□ 2.09
ACTB-203ENST00000417101 RASSF10A6NK89 507 aa28.12■■■□□ 2.09
ACTB-203ENST00000417101 YDJCA8MPS7 323 aa28.12■■■□□ 2.09
ACTB-203ENST00000417101 WASHC4Q2M389 1173 aa28.12■■■□□ 2.09
ACTB-203ENST00000417101 DEFB115Q30KQ5 88 aa28.12■■■□□ 2.09
ACTB-203ENST00000417101 TSR2Q969E8 191 aaKnown RBP28.12■■■□□ 2.09
ACTB-203ENST00000417101 CHMP4AQ9BY43 222 aa28.12■■■□□ 2.09
ACTB-203ENST00000417101 COL4A1P02462 1669 aa28.11■■■□□ 2.09
ACTB-203ENST00000417101 C6orf229H3BNL8 230 aa28.11■■■□□ 2.09
ACTB-203ENST00000417101 TRAF5O00463 557 aa28.11■■■□□ 2.09
ACTB-203ENST00000417101 DDX58O95786 925 aaKnown RBP28.11■■■□□ 2.09
ACTB-203ENST00000417101 RPS8P62241 208 aaKnown RBP28.11■■■□□ 2.09
ACTB-203ENST00000417101 GPSM2P81274 684 aa28.11■■■□□ 2.09
ACTB-203ENST00000417101 CCDC191Q8NCU4 936 aa28.11■■■□□ 2.09
ACTB-203ENST00000417101 RIMBP2O15034 1052 aa28.1■■■□□ 2.09
ACTB-203ENST00000417101 HSP90B1P14625 803 aaKnown RBP28.1■■■□□ 2.09
ACTB-203ENST00000417101 CWC25Q9NXE8 425 aaPredicted RBP28.1■■■□□ 2.09
ACTB-203ENST00000417101 POLLQ9UGP5 575 aa28.1■■■□□ 2.09
ACTB-203ENST00000417101 CDHR2Q9BYE9 1310 aa28.1■■■□□ 2.09
ACTB-203ENST00000417101 PCCAP05165 728 aaPredicted RBP28.09■■■□□ 2.09
ACTB-203ENST00000417101 JARID2Q92833 1246 aaPredicted RBP28.09■■■□□ 2.09
ACTB-203ENST00000417101 METTL22Q9BUU2 404 aaPredicted RBP28.09■■■□□ 2.09
ACTB-203ENST00000417101 SEC31BQ9NQW1 1179 aa28.09■■■□□ 2.09
ACTB-203ENST00000417101 FOXN1O15353 648 aa28.08■■■□□ 2.09
ACTB-203ENST00000417101 DBNDD1Q9H9R9 158 aa28.08■■■□□ 2.09
ACTB-203ENST00000417101 CCDC27Q2M243 656 aa28.07■■■□□ 2.08
ACTB-203ENST00000417101 WWC1Q8IX03 1113 aa28.07■■■□□ 2.08
ACTB-203ENST00000417101 MAP3K2Q9Y2U5 619 aa28.07■■■□□ 2.08
ACTB-203ENST00000417101 CCDC152Q4G0S7 254 aa28.06■■■□□ 2.08
ACTB-203ENST00000417101 CST9Q5W186 159 aa28.06■■■□□ 2.08
ACTB-203ENST00000417101 GPR101Q96P66 508 aaPredicted RBP28.06■■■□□ 2.08
ACTB-203ENST00000417101 CNOT7Q9UIV1 285 aaKnown RBP28.06■■■□□ 2.08
ACTB-203ENST00000417101 SHTN1A0MZ66 631 aa28.05■■■□□ 2.08
ACTB-203ENST00000417101 PDE8AO60658 829 aa28.05■■■□□ 2.08
ACTB-203ENST00000417101 HIRAP54198 1017 aaPredicted RBP28.05■■■□□ 2.08
ACTB-203ENST00000417101 TBC1D16Q8TBP0 767 aa28.05■■■□□ 2.08
ACTB-203ENST00000417101 TRPM4Q8TD43 1214 aa28.05■■■□□ 2.08
ACTB-203ENST00000417101 AIDAQ96BJ3 306 aa28.05■■■□□ 2.08
ACTB-203ENST00000417101 CCDC85AQ96PX6 553 aaPredicted RBP28.05■■■□□ 2.08
ACTB-203ENST00000417101 EYA3Q99504 573 aa28.05■■■□□ 2.08
ACTB-203ENST00000417101 ZBTB12Q9Y330 459 aaPredicted RBP28.05■■■□□ 2.08
ACTB-203ENST00000417101 WDR33Q9C0J8 1336 aaKnown RBP28.04■■■□□ 2.08
ACTB-203ENST00000417101 PI4KAP2A4QPH2 592 aa28.04■■■□□ 2.08
ACTB-203ENST00000417101 PSMD14O00487 310 aa28.04■■■□□ 2.08
ACTB-203ENST00000417101 CAPN15O75808 1086 aa28.04■■■□□ 2.08
ACTB-203ENST00000417101 DOK7Q18PE1 504 aa28.04■■■□□ 2.08
ACTB-203ENST00000417101 KSR2Q6VAB6 950 aa28.04■■■□□ 2.08
ACTB-203ENST00000417101 PI4KAP1Q8N8J0 262 aa28.04■■■□□ 2.08
ACTB-203ENST00000417101 STK31Q9BXU1 1019 aa28.04■■■□□ 2.08
ACTB-203ENST00000417101 H7C1D1 291 aa28.03■■■□□ 2.08
ACTB-203ENST00000417101 ECE2O60344 883 aa28.03■■■□□ 2.08
ACTB-203ENST00000417101 MICALL2Q8IY33 904 aa28.03■■■□□ 2.08
ACTB-203ENST00000417101 GLIS2Q9BZE0 524 aaPredicted RBP28.03■■■□□ 2.08
ACTB-203ENST00000417101 WBP1LQ9NX94 342 aa28.03■■■□□ 2.08
ACTB-203ENST00000417101 PGAP2Q9UHJ9 254 aa28.03■■■□□ 2.08
ACTB-203ENST00000417101 TWISTNBQ3B726 338 aaPredicted RBP28.02■■■□□ 2.08
ACTB-203ENST00000417101 PAXIP1Q6ZW49 1069 aaPredicted RBP28.02■■■□□ 2.08
ACTB-203ENST00000417101 ZC3H15Q8WU90 426 aaKnown RBP28.02■■■□□ 2.08
ACTB-203ENST00000417101 MRS2Q9HD23 443 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms