RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 KIAA2012Q0VF49 1180 aa17.35■□□□□ 0.37
LINC01398-201ENST00000416581 AOC3Q16853 763 aa17.35■□□□□ 0.37
LINC01398-201ENST00000416581 DEFB115Q30KQ5 88 aa17.35■□□□□ 0.37
LINC01398-201ENST00000416581 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
LINC01398-201ENST00000416581 CHPF2Q9P2E5 772 aa17.35■□□□□ 0.37
LINC01398-201ENST00000416581 ABT1Q9ULW3 272 aaKnown RBP17.35■□□□□ 0.37
LINC01398-201ENST00000416581 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
LINC01398-201ENST00000416581 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
LINC01398-201ENST00000416581 ANKRD13DQ6ZTN6 518 aa17.34■□□□□ 0.37
LINC01398-201ENST00000416581 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
LINC01398-201ENST00000416581 GPRC5DQ9NZD1 345 aa17.34■□□□□ 0.37
LINC01398-201ENST00000416581 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
LINC01398-201ENST00000416581 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.36
LINC01398-201ENST00000416581 VEGFBP49765 207 aa17.33■□□□□ 0.36
LINC01398-201ENST00000416581 TRIM28Q13263 835 aaKnown RBP17.33■□□□□ 0.36
LINC01398-201ENST00000416581 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
LINC01398-201ENST00000416581 NECTIN2Q92692 538 aa17.33■□□□□ 0.36
LINC01398-201ENST00000416581 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.36
LINC01398-201ENST00000416581 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
LINC01398-201ENST00000416581 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
LINC01398-201ENST00000416581 ZC3H15Q8WU90 426 aaKnown RBP17.32■□□□□ 0.36
LINC01398-201ENST00000416581 ISCA1Q9BUE6 129 aa17.32■□□□□ 0.36
LINC01398-201ENST00000416581 EPS15P42566 896 aa17.31■□□□□ 0.36
LINC01398-201ENST00000416581 GNAI1P63096 354 aa17.31■□□□□ 0.36
LINC01398-201ENST00000416581 CXCL9Q07325 125 aa17.31■□□□□ 0.36
LINC01398-201ENST00000416581 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
LINC01398-201ENST00000416581 BCL2L13Q9BXK5 485 aa17.31■□□□□ 0.36
LINC01398-201ENST00000416581 IFT57Q9NWB7 429 aa17.31■□□□□ 0.36
LINC01398-201ENST00000416581 ADAMTS8Q9UP79 889 aa17.31■□□□□ 0.36
LINC01398-201ENST00000416581 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
LINC01398-201ENST00000416581 EYA3Q99504 573 aa17.3■□□□□ 0.36
LINC01398-201ENST00000416581 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
LINC01398-201ENST00000416581 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
LINC01398-201ENST00000416581 WBP1LQ9NX94 342 aa17.3■□□□□ 0.36
LINC01398-201ENST00000416581 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
LINC01398-201ENST00000416581 FOXN1O15353 648 aa17.29■□□□□ 0.36
LINC01398-201ENST00000416581 DUOX1Q9NRD9 1551 aa17.28■□□□□ 0.36
LINC01398-201ENST00000416581 H7C1D1 291 aa17.28■□□□□ 0.36
LINC01398-201ENST00000416581 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
LINC01398-201ENST00000416581 GMPSP49915 693 aaPredicted RBP17.28■□□□□ 0.36
LINC01398-201ENST00000416581 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
LINC01398-201ENST00000416581 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
LINC01398-201ENST00000416581 HHIPL1Q96JK4 782 aa17.28■□□□□ 0.36
LINC01398-201ENST00000416581 RPS12P25398 132 aaKnown RBP17.27■□□□□ 0.36
LINC01398-201ENST00000416581 WASHC4Q2M389 1173 aa17.27■□□□□ 0.36
LINC01398-201ENST00000416581 DPF2Q92785 391 aa17.27■□□□□ 0.36
LINC01398-201ENST00000416581 MBIPQ9NS73 344 aa17.27■□□□□ 0.36
LINC01398-201ENST00000416581 PGAP2Q9UHJ9 254 aa17.27■□□□□ 0.36
LINC01398-201ENST00000416581 TLL2Q9Y6L7 1015 aa17.27■□□□□ 0.36
LINC01398-201ENST00000416581 PCNTO95613 3336 aa17.27■□□□□ 0.35
LINC01398-201ENST00000416581 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
LINC01398-201ENST00000416581 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
LINC01398-201ENST00000416581 MAP2K2P36507 400 aa17.26■□□□□ 0.35
LINC01398-201ENST00000416581 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
LINC01398-201ENST00000416581 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
LINC01398-201ENST00000416581 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
LINC01398-201ENST00000416581 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
LINC01398-201ENST00000416581 CAPNS2Q96L46 248 aa17.26■□□□□ 0.35
LINC01398-201ENST00000416581 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
LINC01398-201ENST00000416581 CA12O43570 354 aa17.25■□□□□ 0.35
LINC01398-201ENST00000416581 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
LINC01398-201ENST00000416581 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
LINC01398-201ENST00000416581 RAD17O75943 681 aa17.24■□□□□ 0.35
LINC01398-201ENST00000416581 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
LINC01398-201ENST00000416581 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
LINC01398-201ENST00000416581 CNOT7Q9UIV1 285 aaKnown RBP17.24■□□□□ 0.35
LINC01398-201ENST00000416581 TAF1P21675 1872 aa17.23■□□□□ 0.35
LINC01398-201ENST00000416581 C6orf229H3BNL8 230 aa17.23■□□□□ 0.35
LINC01398-201ENST00000416581 APAF1O14727 1248 aa17.23■□□□□ 0.35
LINC01398-201ENST00000416581 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
LINC01398-201ENST00000416581 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
LINC01398-201ENST00000416581 GPR101Q96P66 508 aaPredicted RBP17.23■□□□□ 0.35
LINC01398-201ENST00000416581 CELF2O95319 508 aaKnown RBP17.22■□□□□ 0.35
LINC01398-201ENST00000416581 PCCAP05165 728 aaPredicted RBP17.22■□□□□ 0.35
LINC01398-201ENST00000416581 LBX1P52954 281 aa17.22■□□□□ 0.35
LINC01398-201ENST00000416581 SAPCD2Q86UD0 394 aa17.22■□□□□ 0.35
LINC01398-201ENST00000416581 MICALL2Q8IY33 904 aa17.22■□□□□ 0.35
LINC01398-201ENST00000416581 ZC3H12CQ9C0D7 883 aaKnown RBP17.22■□□□□ 0.35
LINC01398-201ENST00000416581 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
LINC01398-201ENST00000416581 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
LINC01398-201ENST00000416581 ZNF609O15014 1411 aa17.21■□□□□ 0.35
LINC01398-201ENST00000416581 ZNF316A6NFI3 1004 aaPredicted RBP17.21■□□□□ 0.35
LINC01398-201ENST00000416581 G3V3G9 751 aa17.21■□□□□ 0.35
LINC01398-201ENST00000416581 TRAF5O00463 557 aa17.21■□□□□ 0.35
LINC01398-201ENST00000416581 PDE8AO60658 829 aa17.21■□□□□ 0.35
LINC01398-201ENST00000416581 HSPA8P11142 646 aaKnown RBP17.21■□□□□ 0.35
LINC01398-201ENST00000416581 DCAF8Q5TAQ9 597 aa17.21■□□□□ 0.35
LINC01398-201ENST00000416581 CST9Q5W186 159 aa17.21■□□□□ 0.35
LINC01398-201ENST00000416581 SLC51AQ86UW1 340 aa17.21■□□□□ 0.35
LINC01398-201ENST00000416581 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
LINC01398-201ENST00000416581 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
LINC01398-201ENST00000416581 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
LINC01398-201ENST00000416581 ECE2O60344 883 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 GPSM2P81274 684 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 CYP4F22Q6NT55 531 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
LINC01398-201ENST00000416581 MYD88Q99836 296 aa17.19■□□□□ 0.34
LINC01398-201ENST00000416581 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
LINC01398-201ENST00000416581 GLIS2Q9BZE0 524 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms