RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 ZNF652Q9Y2D9 606 aa13.95□□□□□ -0.18
LINC00330-201ENST00000414562 CARMIL3Q8ND23 1372 aa13.95□□□□□ -0.18
LINC00330-201ENST00000414562 FLAD1Q8NFF5 587 aa13.95□□□□□ -0.18
LINC00330-201ENST00000414562 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
LINC00330-201ENST00000414562 TAF1P21675 1872 aa13.94□□□□□ -0.18
LINC00330-201ENST00000414562 TNRC6CQ9HCJ0 1690 aaKnown RBP13.94□□□□□ -0.18
LINC00330-201ENST00000414562 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
LINC00330-201ENST00000414562 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
LINC00330-201ENST00000414562 EXOC6BQ9Y2D4 811 aa13.94□□□□□ -0.18
LINC00330-201ENST00000414562 LAMB2P55268 1798 aa13.94□□□□□ -0.18
LINC00330-201ENST00000414562 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
LINC00330-201ENST00000414562 NRXN2Q9P2S2 1712 aa13.93□□□□□ -0.18
LINC00330-201ENST00000414562 ANKRD31Q8N7Z5 1873 aa13.93□□□□□ -0.18
LINC00330-201ENST00000414562 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
LINC00330-201ENST00000414562 ZBTB7AO95365 584 aa13.93□□□□□ -0.18
LINC00330-201ENST00000414562 MMP10P09238 476 aa13.93□□□□□ -0.18
LINC00330-201ENST00000414562 PARP10Q53GL7 1025 aa13.93□□□□□ -0.18
LINC00330-201ENST00000414562 PRR5LQ6MZQ0 368 aa13.93□□□□□ -0.18
LINC00330-201ENST00000414562 IRS4O14654 1257 aaPredicted RBP13.92□□□□□ -0.18
LINC00330-201ENST00000414562 SERPINB2P05120 415 aa13.92□□□□□ -0.18
LINC00330-201ENST00000414562 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
LINC00330-201ENST00000414562 SSH3Q8TE77 659 aa13.92□□□□□ -0.18
LINC00330-201ENST00000414562 CCDC85AQ96PX6 553 aaPredicted RBP13.92□□□□□ -0.18
LINC00330-201ENST00000414562 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
LINC00330-201ENST00000414562 RABL6Q3YEC7 729 aaPredicted RBP13.91□□□□□ -0.18
LINC00330-201ENST00000414562 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 KLHDC4Q8TBB5 520 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 MYH3P11055 1940 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 SH3TC1Q8TE82 1336 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
LINC00330-201ENST00000414562 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
LINC00330-201ENST00000414562 LMBR1LQ6UX01 489 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
LINC00330-201ENST00000414562 PLEKHM2Q8IWE5 1019 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 C16orf71Q8IYS4 520 aaPredicted RBP13.91□□□□□ -0.18
LINC00330-201ENST00000414562 PLA2G12BQ9BX93 195 aa13.91□□□□□ -0.18
LINC00330-201ENST00000414562 UPF2Q9HAU5 1272 aaKnown RBP13.91□□□□□ -0.18
LINC00330-201ENST00000414562 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
LINC00330-201ENST00000414562 SURF6O75683 361 aaKnown RBP13.9□□□□□ -0.18
LINC00330-201ENST00000414562 CSF1RP07333 972 aa13.9□□□□□ -0.18
LINC00330-201ENST00000414562 POLA2Q14181 598 aa13.9□□□□□ -0.18
LINC00330-201ENST00000414562 BMP2KLQ5H9B9 411 aa13.9□□□□□ -0.18
LINC00330-201ENST00000414562 SLC10A5Q5PT55 438 aa13.9□□□□□ -0.18
LINC00330-201ENST00000414562 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
LINC00330-201ENST00000414562 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
LINC00330-201ENST00000414562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
LINC00330-201ENST00000414562 FGD1P98174 961 aa13.9□□□□□ -0.18
LINC00330-201ENST00000414562 MTX1Q13505 466 aa13.9□□□□□ -0.18
LINC00330-201ENST00000414562 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
LINC00330-201ENST00000414562 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
LINC00330-201ENST00000414562 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
LINC00330-201ENST00000414562 GREM2Q9H772 168 aa13.89□□□□□ -0.19
LINC00330-201ENST00000414562 SEC24BO95487 1268 aa13.88□□□□□ -0.19
LINC00330-201ENST00000414562 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
LINC00330-201ENST00000414562 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
LINC00330-201ENST00000414562 OTUD7AQ8TE49 926 aaPredicted RBP13.88□□□□□ -0.19
LINC00330-201ENST00000414562 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
LINC00330-201ENST00000414562 SEC31BQ9NQW1 1179 aa13.88□□□□□ -0.19
LINC00330-201ENST00000414562 PDE8AO60658 829 aa13.88□□□□□ -0.19
LINC00330-201ENST00000414562 CTSWP56202 376 aa13.88□□□□□ -0.19
LINC00330-201ENST00000414562 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
LINC00330-201ENST00000414562 TPTE2Q6XPS3 522 aa13.88□□□□□ -0.19
LINC00330-201ENST00000414562 TTC22Q5TAA0 569 aa13.87□□□□□ -0.19
LINC00330-201ENST00000414562 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
LINC00330-201ENST00000414562 PTGER2P43116 358 aa13.86□□□□□ -0.19
LINC00330-201ENST00000414562 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
LINC00330-201ENST00000414562 COL11A2P13942 1736 aaPredicted RBP13.86□□□□□ -0.19
LINC00330-201ENST00000414562 SLC16A10Q8TF71 515 aa13.86□□□□□ -0.19
LINC00330-201ENST00000414562 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
LINC00330-201ENST00000414562 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
LINC00330-201ENST00000414562 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
LINC00330-201ENST00000414562 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
LINC00330-201ENST00000414562 PARP3Q9Y6F1 533 aa13.85□□□□□ -0.19
LINC00330-201ENST00000414562 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
LINC00330-201ENST00000414562 MFAP1P55081 439 aaKnown RBP13.85□□□□□ -0.19
LINC00330-201ENST00000414562 SF3B3Q15393 1217 aaKnown RBP13.85□□□□□ -0.19
LINC00330-201ENST00000414562 RHPN1Q8TCX5 695 aa13.85□□□□□ -0.19
LINC00330-201ENST00000414562 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
LINC00330-201ENST00000414562 SPEF2Q9C093 1822 aa13.84□□□□□ -0.19
LINC00330-201ENST00000414562 KLRG2A4D1S0 409 aaPredicted RBP13.84□□□□□ -0.19
LINC00330-201ENST00000414562 SOCS7O14512 581 aa13.84□□□□□ -0.19
LINC00330-201ENST00000414562 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
LINC00330-201ENST00000414562 PDE1AP54750 535 aa13.84□□□□□ -0.19
LINC00330-201ENST00000414562 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
LINC00330-201ENST00000414562 MTFR1LQ9H019 292 aa13.84□□□□□ -0.19
LINC00330-201ENST00000414562 CHMP3Q9Y3E7 222 aa13.84□□□□□ -0.19
LINC00330-201ENST00000414562 CDC45O75419 566 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 MX1P20591 662 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 ITGA6P23229 1130 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 G3BP1Q13283 466 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC00330-201ENST00000414562 ERC1Q8IUD2 1116 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 SIL1Q9H173 461 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 NOP58Q9Y2X3 529 aaKnown RBP13.83□□□□□ -0.2
LINC00330-201ENST00000414562 WTIPA6NIX2 430 aaPredicted RBP13.83□□□□□ -0.2
LINC00330-201ENST00000414562 CRY2Q49AN0 593 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
LINC00330-201ENST00000414562 OSBPL3Q9H4L5 887 aa13.83□□□□□ -0.2
LINC00330-201ENST00000414562 KIAA1551Q9HCM1 1747 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms