RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 RARSP54136 660 aaKnown RBP29.88■■■□□ 2.37
R3HCC1-202ENST00000411463 TMX4Q9H1E5 349 aaPredicted RBP29.88■■■□□ 2.37
R3HCC1-202ENST00000411463 ATP6V0A2Q9Y487 856 aa29.88■■■□□ 2.37
R3HCC1-202ENST00000411463 CCDC152Q4G0S7 254 aa29.87■■■□□ 2.37
R3HCC1-202ENST00000411463 SRCIN1Q9C0H9 1055 aa29.87■■■□□ 2.37
R3HCC1-202ENST00000411463 BRPF1P55201 1214 aaPredicted RBP29.87■■■□□ 2.37
R3HCC1-202ENST00000411463 FKBP4Q02790 459 aaKnown RBP eCLIP29.87■■■□□ 2.37
R3HCC1-202ENST00000411463 GRIPAP1Q4V328 841 aa29.87■■■□□ 2.37
R3HCC1-202ENST00000411463 ALDH1L1O75891 902 aa29.86■■■□□ 2.37
R3HCC1-202ENST00000411463 FER1L6Q2WGJ9 1857 aa29.85■■■□□ 2.37
R3HCC1-202ENST00000411463 CASP7P55210 303 aa29.85■■■□□ 2.37
R3HCC1-202ENST00000411463 CTSWP56202 376 aa29.85■■■□□ 2.37
R3HCC1-202ENST00000411463 SP8Q8IXZ3 490 aa29.85■■■□□ 2.37
R3HCC1-202ENST00000411463 CELF1Q92879 486 aaKnown RBP29.85■■■□□ 2.37
R3HCC1-202ENST00000411463 TMC4Q7Z404 712 aa29.84■■■□□ 2.37
R3HCC1-202ENST00000411463 SLC51AQ86UW1 340 aa29.84■■■□□ 2.37
R3HCC1-202ENST00000411463 CCDC85AQ96PX6 553 aaPredicted RBP29.84■■■□□ 2.37
R3HCC1-202ENST00000411463 TTLL11Q8NHH1 800 aa29.83■■■□□ 2.37
R3HCC1-202ENST00000411463 SNED1Q8TER0 1413 aa29.83■■■□□ 2.37
R3HCC1-202ENST00000411463 PSMD1Q99460 953 aa29.83■■■□□ 2.37
R3HCC1-202ENST00000411463 NOB1Q9ULX3 412 aaKnown RBP29.83■■■□□ 2.37
R3HCC1-202ENST00000411463 ZNF526Q8TF50 670 aaPredicted RBP29.82■■■□□ 2.36
R3HCC1-202ENST00000411463 PLA2G12BQ9BX93 195 aa29.82■■■□□ 2.36
R3HCC1-202ENST00000411463 SEC31BQ9NQW1 1179 aa29.82■■■□□ 2.36
R3HCC1-202ENST00000411463 C9orf78Q9NZ63 289 aaPredicted RBP29.82■■■□□ 2.36
R3HCC1-202ENST00000411463 GRM8O00222 908 aa29.81■■■□□ 2.36
R3HCC1-202ENST00000411463 RPS8P62241 208 aaKnown RBP29.81■■■□□ 2.36
R3HCC1-202ENST00000411463 ZNF277Q9NRM2 450 aaPredicted RBP29.81■■■□□ 2.36
R3HCC1-202ENST00000411463 ZC3H4Q9UPT8 1303 aaKnown RBP29.81■■■□□ 2.36
R3HCC1-202ENST00000411463 SBF1O95248 1867 aa29.8■■■□□ 2.36
R3HCC1-202ENST00000411463 GPBP1L1Q9HC44 474 aaPredicted RBP29.79■■■□□ 2.36
R3HCC1-202ENST00000411463 KIF16BQ96L93 1317 aa29.79■■■□□ 2.36
R3HCC1-202ENST00000411463 API5Q9BZZ5 524 aaKnown RBP29.78■■■□□ 2.36
R3HCC1-202ENST00000411463 MPNDQ8N594 471 aa29.77■■■□□ 2.36
R3HCC1-202ENST00000411463 GREM2Q9H772 168 aa29.77■■■□□ 2.36
R3HCC1-202ENST00000411463 IARSP41252 1262 aaKnown RBP29.76■■■□□ 2.35
R3HCC1-202ENST00000411463 DPP8Q6V1X1 898 aaPredicted RBP29.76■■■□□ 2.35
R3HCC1-202ENST00000411463 RTL9Q8NET4 1388 aa29.76■■■□□ 2.35
R3HCC1-202ENST00000411463 BCAR3O75815 825 aa29.75■■■□□ 2.35
R3HCC1-202ENST00000411463 CSF1RP07333 972 aa29.75■■■□□ 2.35
R3HCC1-202ENST00000411463 ARHGAP45Q92619 1136 aa29.75■■■□□ 2.35
R3HCC1-202ENST00000411463 CDC5LQ99459 802 aaKnown RBP29.75■■■□□ 2.35
R3HCC1-202ENST00000411463 ANKRD18AQ8IVF6 992 aa29.74■■■□□ 2.35
R3HCC1-202ENST00000411463 COL4A1P02462 1669 aa29.74■■■□□ 2.35
R3HCC1-202ENST00000411463 TAF1P21675 1872 aa29.74■■■□□ 2.35
R3HCC1-202ENST00000411463 FOXO4P98177 505 aa29.74■■■□□ 2.35
R3HCC1-202ENST00000411463 SUPT20HQ8NEM7 779 aa29.74■■■□□ 2.35
R3HCC1-202ENST00000411463 RTFDC1Q9BY42 306 aaPredicted RBP29.74■■■□□ 2.35
R3HCC1-202ENST00000411463 UTYO14607 1347 aa29.73■■■□□ 2.35
R3HCC1-202ENST00000411463 IPO8O15397 1037 aaKnown RBP29.73■■■□□ 2.35
R3HCC1-202ENST00000411463 NBPF7P0C2Y1 421 aaPredicted RBP29.73■■■□□ 2.35
R3HCC1-202ENST00000411463 KDM2BQ8NHM5 1336 aa29.72■■■□□ 2.35
R3HCC1-202ENST00000411463 CCT4P50991 539 aaKnown RBP29.72■■■□□ 2.35
R3HCC1-202ENST00000411463 NSFL1CQ9UNZ2 370 aaKnown RBP29.72■■■□□ 2.35
R3HCC1-202ENST00000411463 ITGA6P23229 1130 aa29.71■■■□□ 2.35
R3HCC1-202ENST00000411463 FAM161AQ3B820 660 aa29.71■■■□□ 2.35
R3HCC1-202ENST00000411463 FRAT1Q92837 279 aaPredicted RBP29.71■■■□□ 2.35
R3HCC1-202ENST00000411463 GLTPD2A6NH11 291 aa29.7■■■□□ 2.35
R3HCC1-202ENST00000411463 EPHA10Q5JZY3 1008 aa29.7■■■□□ 2.35
R3HCC1-202ENST00000411463 DPY19L2Q6NUT2 758 aa29.7■■■□□ 2.35
R3HCC1-202ENST00000411463 JDP2Q8WYK2 163 aa29.7■■■□□ 2.35
R3HCC1-202ENST00000411463 VPS33BQ9H267 617 aa29.7■■■□□ 2.35
R3HCC1-202ENST00000411463 LMBR1LQ6UX01 489 aa29.69■■■□□ 2.34
R3HCC1-202ENST00000411463 LARGE2Q8N3Y3 721 aa29.69■■■□□ 2.34
R3HCC1-202ENST00000411463 USP44Q9H0E7 712 aa29.69■■■□□ 2.34
R3HCC1-202ENST00000411463 CCDC88AQ3V6T2 1871 aa29.69■■■□□ 2.34
R3HCC1-202ENST00000411463 GPSM2P81274 684 aa29.68■■■□□ 2.34
R3HCC1-202ENST00000411463 SUCLG2Q96I99 432 aa29.68■■■□□ 2.34
R3HCC1-202ENST00000411463 CHMP3Q9Y3E7 222 aa29.68■■■□□ 2.34
R3HCC1-202ENST00000411463 TIAM2Q8IVF5 1701 aa29.68■■■□□ 2.34
R3HCC1-202ENST00000411463 PPIP5K2O43314 1243 aa29.68■■■□□ 2.34
R3HCC1-202ENST00000411463 BSDC1Q9NW68 430 aaPredicted RBP29.68■■■□□ 2.34
R3HCC1-202ENST00000411463 LRRC37AA6NMS7 1700 aa29.67■■■□□ 2.34
R3HCC1-202ENST00000411463 ANKRD18BA2A2Z9 1011 aa29.67■■■□□ 2.34
R3HCC1-202ENST00000411463 IGHMBP2P38935 993 aaKnown RBP29.67■■■□□ 2.34
R3HCC1-202ENST00000411463 AOC3Q16853 763 aa29.67■■■□□ 2.34
R3HCC1-202ENST00000411463 ATF7IPQ6VMQ6 1270 aa29.67■■■□□ 2.34
R3HCC1-202ENST00000411463 MYH3P11055 1940 aa29.66■■■□□ 2.34
R3HCC1-202ENST00000411463 IFIT5Q13325 482 aaKnown RBP29.66■■■□□ 2.34
R3HCC1-202ENST00000411463 KAZALD1Q96I82 304 aa29.66■■■□□ 2.34
R3HCC1-202ENST00000411463 NMRK2Q9NPI5 230 aa29.66■■■□□ 2.34
R3HCC1-202ENST00000411463 ANKIB1Q9P2G1 1089 aa29.66■■■□□ 2.34
R3HCC1-202ENST00000411463 DICER1Q9UPY3 1922 aaKnown RBP29.65■■■□□ 2.34
R3HCC1-202ENST00000411463 FZD9O00144 591 aa29.65■■■□□ 2.34
R3HCC1-202ENST00000411463 TRIM27P14373 513 aa29.65■■■□□ 2.34
R3HCC1-202ENST00000411463 PODXL2Q9NZ53 605 aa29.65■■■□□ 2.34
R3HCC1-202ENST00000411463 C6orf229H3BNL8 230 aa29.64■■■□□ 2.34
R3HCC1-202ENST00000411463 KIAA2012Q0VF49 1180 aa29.64■■■□□ 2.34
R3HCC1-202ENST00000411463 POLLQ9UGP5 575 aa29.64■■■□□ 2.34
R3HCC1-202ENST00000411463 CCDC57Q2TAC2 916 aa29.63■■■□□ 2.33
R3HCC1-202ENST00000411463 ZKSCAN2Q63HK3 967 aa29.63■■■□□ 2.33
R3HCC1-202ENST00000411463 INTS3Q68E01 1043 aaKnown RBP29.63■■■□□ 2.33
R3HCC1-202ENST00000411463 NIM1KQ8IY84 436 aa29.63■■■□□ 2.33
R3HCC1-202ENST00000411463 MPHOSPH8Q99549 860 aa29.63■■■□□ 2.33
R3HCC1-202ENST00000411463 MINPP1Q9UNW1 487 aa29.63■■■□□ 2.33
R3HCC1-202ENST00000411463 TBC1D16Q8TBP0 767 aa29.62■■■□□ 2.33
R3HCC1-202ENST00000411463 BICC1Q9H694 974 aaKnown RBP29.62■■■□□ 2.33
R3HCC1-202ENST00000411463 DUOX1Q9NRD9 1551 aa29.62■■■□□ 2.33
R3HCC1-202ENST00000411463 COL4A5P29400 1685 aa29.62■■■□□ 2.33
R3HCC1-202ENST00000411463 DDNO94850 711 aaPredicted RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms