RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 MYD88Q99836 296 aa29.07■■■□□ 2.24
KDELR3-202ENST00000409006 RTFDC1Q9BY42 306 aaPredicted RBP29.07■■■□□ 2.24
KDELR3-202ENST00000409006 TMX4Q9H1E5 349 aaPredicted RBP29.07■■■□□ 2.24
KDELR3-202ENST00000409006 DUOX1Q9NRD9 1551 aa29.06■■■□□ 2.24
KDELR3-202ENST00000409006 SF3B3Q15393 1217 aaKnown RBP29.06■■■□□ 2.24
KDELR3-202ENST00000409006 CCDC30Q5VVM6 783 aa29.06■■■□□ 2.24
KDELR3-202ENST00000409006 JMYQ8N9B5 988 aa29.06■■■□□ 2.24
KDELR3-202ENST00000409006 DPP8Q6V1X1 898 aaPredicted RBP29.05■■■□□ 2.24
KDELR3-202ENST00000409006 NIM1KQ8IY84 436 aa29.05■■■□□ 2.24
KDELR3-202ENST00000409006 MPNDQ8N594 471 aa29.05■■■□□ 2.24
KDELR3-202ENST00000409006 CELF1Q92879 486 aaKnown RBP29.05■■■□□ 2.24
KDELR3-202ENST00000409006 IRS4O14654 1257 aaPredicted RBP29.04■■■□□ 2.24
KDELR3-202ENST00000409006 PASKQ96RG2 1323 aa29.02■■■□□ 2.24
KDELR3-202ENST00000409006 SCNN1DP51172 638 aa29.02■■■□□ 2.24
KDELR3-202ENST00000409006 ZBTB38Q8NAP3 1195 aaPredicted RBP29.02■■■□□ 2.24
KDELR3-202ENST00000409006 SUPT20HQ8NEM7 779 aa29.02■■■□□ 2.24
KDELR3-202ENST00000409006 JARID2Q92833 1246 aaPredicted RBP29.02■■■□□ 2.24
KDELR3-202ENST00000409006 VPS33BQ9H267 617 aa29.02■■■□□ 2.24
KDELR3-202ENST00000409006 CLEC11AQ9Y240 323 aa29.02■■■□□ 2.24
KDELR3-202ENST00000409006 ITGBL1O95965 494 aaPredicted RBP29.01■■■□□ 2.23
KDELR3-202ENST00000409006 METTL22Q9BUU2 404 aaPredicted RBP29.01■■■□□ 2.23
KDELR3-202ENST00000409006 SALL2Q9Y467 1007 aaPredicted RBP29.01■■■□□ 2.23
KDELR3-202ENST00000409006 EPS15P42566 896 aa28.99■■■□□ 2.23
KDELR3-202ENST00000409006 KIAA2012Q0VF49 1180 aa28.99■■■□□ 2.23
KDELR3-202ENST00000409006 TWISTNBQ3B726 338 aaPredicted RBP28.99■■■□□ 2.23
KDELR3-202ENST00000409006 PNMA8AQ86V59 439 aaPredicted RBP28.99■■■□□ 2.23
KDELR3-202ENST00000409006 CCDC191Q8NCU4 936 aa28.99■■■□□ 2.23
KDELR3-202ENST00000409006 ZNRF3Q9ULT6 936 aa28.99■■■□□ 2.23
KDELR3-202ENST00000409006 MAP3K2Q9Y2U5 619 aa28.99■■■□□ 2.23
KDELR3-202ENST00000409006 IL16Q14005 1332 aa28.98■■■□□ 2.23
KDELR3-202ENST00000409006 CXCL9Q07325 125 aa28.98■■■□□ 2.23
KDELR3-202ENST00000409006 NCBP3Q53F19 620 aaKnown RBP28.98■■■□□ 2.23
KDELR3-202ENST00000409006 MAP1SQ66K74 1059 aaPredicted RBP28.98■■■□□ 2.23
KDELR3-202ENST00000409006 G2E3Q7L622 706 aa28.98■■■□□ 2.23
KDELR3-202ENST00000409006 TMC4Q7Z404 712 aa28.98■■■□□ 2.23
KDELR3-202ENST00000409006 CREBZFQ9NS37 354 aa28.98■■■□□ 2.23
KDELR3-202ENST00000409006 DDX58O95786 925 aaKnown RBP28.97■■■□□ 2.23
KDELR3-202ENST00000409006 SEC31BQ9NQW1 1179 aa28.97■■■□□ 2.23
KDELR3-202ENST00000409006 CWC25Q9NXE8 425 aaPredicted RBP28.97■■■□□ 2.23
KDELR3-202ENST00000409006 CACNA1FO60840 1977 aa28.97■■■□□ 2.23
KDELR3-202ENST00000409006 PI4KAP2A4QPH2 592 aa28.96■■■□□ 2.23
KDELR3-202ENST00000409006 PCCAP05165 728 aaPredicted RBP28.96■■■□□ 2.23
KDELR3-202ENST00000409006 LMOD1P29536 600 aaPredicted RBP28.96■■■□□ 2.23
KDELR3-202ENST00000409006 KSR2Q6VAB6 950 aa28.96■■■□□ 2.23
KDELR3-202ENST00000409006 PI4KAP1Q8N8J0 262 aa28.96■■■□□ 2.23
KDELR3-202ENST00000409006 CHMP4AQ9BY43 222 aa28.96■■■□□ 2.23
KDELR3-202ENST00000409006 MYH3P11055 1940 aa28.96■■■□□ 2.23
KDELR3-202ENST00000409006 PCNTO95613 3336 aa28.95■■■□□ 2.23
KDELR3-202ENST00000409006 IGKV5-2P06315 115 aa28.95■■■□□ 2.22
KDELR3-202ENST00000409006 NSFL1CQ9UNZ2 370 aaKnown RBP28.95■■■□□ 2.22
KDELR3-202ENST00000409006 FANCIQ9NVI1 1328 aa28.94■■■□□ 2.22
KDELR3-202ENST00000409006 RPS8P62241 208 aaKnown RBP28.94■■■□□ 2.22
KDELR3-202ENST00000409006 GPSM2P81274 684 aa28.94■■■□□ 2.22
KDELR3-202ENST00000409006 CNTROBQ8N137 903 aa28.94■■■□□ 2.22
KDELR3-202ENST00000409006 STK31Q9BXU1 1019 aa28.94■■■□□ 2.22
KDELR3-202ENST00000409006 YDJCA8MPS7 323 aa28.93■■■□□ 2.22
KDELR3-202ENST00000409006 POLLQ9UGP5 575 aa28.93■■■□□ 2.22
KDELR3-202ENST00000409006 MKRN1Q9UHC7 482 aaKnown RBP28.93■■■□□ 2.22
KDELR3-202ENST00000409006 RAD17O75943 681 aa28.92■■■□□ 2.22
KDELR3-202ENST00000409006 SLC4A2P04920 1241 aa28.92■■■□□ 2.22
KDELR3-202ENST00000409006 CCDC85AQ96PX6 553 aaPredicted RBP28.92■■■□□ 2.22
KDELR3-202ENST00000409006 GPRC5DQ9NZD1 345 aa28.92■■■□□ 2.22
KDELR3-202ENST00000409006 PDE8AO60658 829 aa28.91■■■□□ 2.22
KDELR3-202ENST00000409006 WDR63Q8IWG1 891 aa28.91■■■□□ 2.22
KDELR3-202ENST00000409006 SPINK5Q9NQ38 1064 aaPredicted RBP28.91■■■□□ 2.22
KDELR3-202ENST00000409006 SPEF2Q9C093 1822 aa28.91■■■□□ 2.22
KDELR3-202ENST00000409006 GMPSP49915 693 aaPredicted RBP28.9■■■□□ 2.22
KDELR3-202ENST00000409006 CWF19L2Q2TBE0 894 aaKnown RBP28.9■■■□□ 2.22
KDELR3-202ENST00000409006 CIAPIN1Q6FI81 312 aa28.9■■■□□ 2.22
KDELR3-202ENST00000409006 FAM9BQ8IZU0 186 aa28.9■■■□□ 2.22
KDELR3-202ENST00000409006 GPR101Q96P66 508 aaPredicted RBP28.9■■■□□ 2.22
KDELR3-202ENST00000409006 RIMBP2O15034 1052 aa28.89■■■□□ 2.22
KDELR3-202ENST00000409006 WASHC4Q2M389 1173 aa28.89■■■□□ 2.22
KDELR3-202ENST00000409006 CDHR2Q9BYE9 1310 aa28.89■■■□□ 2.21
KDELR3-202ENST00000409006 TMEM88BA6NKF7 163 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 C6orf229H3BNL8 230 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 VAMP4O75379 141 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 FMR1Q06787 632 aaKnown RBP eCLIP28.88■■■□□ 2.21
KDELR3-202ENST00000409006 CCDC152Q4G0S7 254 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 IFFO2Q5TF58 517 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 USP50Q70EL3 339 aaPredicted RBP28.88■■■□□ 2.21
KDELR3-202ENST00000409006 DBNDD1Q9H9R9 158 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 TRPM7Q96QT4 1865 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 SCN9AQ15858 1988 aa28.88■■■□□ 2.21
KDELR3-202ENST00000409006 HSP90B1P14625 803 aaKnown RBP28.87■■■□□ 2.21
KDELR3-202ENST00000409006 EXOSC9Q06265 439 aaKnown RBP28.87■■■□□ 2.21
KDELR3-202ENST00000409006 TBC1D16Q8TBP0 767 aa28.87■■■□□ 2.21
KDELR3-202ENST00000409006 NEURL1BA8MQ27 555 aa28.86■■■□□ 2.21
KDELR3-202ENST00000409006 ADARB2Q9NS39 739 aaKnown RBP28.86■■■□□ 2.21
KDELR3-202ENST00000409006 CNTNAP1P78357 1384 aa28.86■■■□□ 2.21
KDELR3-202ENST00000409006 SHTN1A0MZ66 631 aa28.85■■■□□ 2.21
KDELR3-202ENST00000409006 NEXNQ0ZGT2 675 aa28.85■■■□□ 2.21
KDELR3-202ENST00000409006 FLIIQ13045 1269 aa28.85■■■□□ 2.21
KDELR3-202ENST00000409006 TNIP1Q15025 636 aa28.85■■■□□ 2.21
KDELR3-202ENST00000409006 KCNQ5Q9NR82 932 aa28.85■■■□□ 2.21
KDELR3-202ENST00000409006 DOK7Q18PE1 504 aa28.84■■■□□ 2.21
KDELR3-202ENST00000409006 BCL2L13Q9BXK5 485 aa28.84■■■□□ 2.21
KDELR3-202ENST00000409006 HSPA1AP0DMV8 641 aaKnown RBP28.83■■■□□ 2.21
KDELR3-202ENST00000409006 HSPA1BP0DMV9 641 aaKnown RBP28.83■■■□□ 2.21
KDELR3-202ENST00000409006 PODXL2Q9NZ53 605 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms