RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CHADLQ6NUI6 762 aa24.84■■□□□ 1.57
SMARCB1-204ENST00000407422 EIF6P56537 245 aaKnown RBP24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 DPP8Q6V1X1 898 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 FAM9BQ8IZU0 186 aa24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 MPNDQ8N594 471 aa24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 ZBTB38Q8NAP3 1195 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 CELF1Q92879 486 aaKnown RBP24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 METTL22Q9BUU2 404 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 RTFDC1Q9BY42 306 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 HACL1Q9UJ83 578 aa24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 MAP3K2Q9Y2U5 619 aa24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 GJA3Q9Y6H8 435 aa24.83■■□□□ 1.57
SMARCB1-204ENST00000407422 DDX58O95786 925 aaKnown RBP24.83■■□□□ 1.56
SMARCB1-204ENST00000407422 JARID2Q92833 1246 aaPredicted RBP24.83■■□□□ 1.56
SMARCB1-204ENST00000407422 FANCIQ9NVI1 1328 aa24.82■■□□□ 1.56
SMARCB1-204ENST00000407422 LRRC37AA6NMS7 1700 aa24.82■■□□□ 1.56
SMARCB1-204ENST00000407422 NIM1KQ8IY84 436 aa24.82■■□□□ 1.56
SMARCB1-204ENST00000407422 CCDC191Q8NCU4 936 aa24.82■■□□□ 1.56
SMARCB1-204ENST00000407422 STK31Q9BXU1 1019 aa24.82■■□□□ 1.56
SMARCB1-204ENST00000407422 PI4KAP2A4QPH2 592 aa24.81■■□□□ 1.56
SMARCB1-204ENST00000407422 G2E3Q7L622 706 aa24.81■■□□□ 1.56
SMARCB1-204ENST00000407422 WDR63Q8IWG1 891 aa24.81■■□□□ 1.56
SMARCB1-204ENST00000407422 PI4KAP1Q8N8J0 262 aa24.81■■□□□ 1.56
SMARCB1-204ENST00000407422 EPHX2P34913 555 aa24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 EAPPQ56P03 285 aaPredicted RBP24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 KSR2Q6VAB6 950 aa24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 LDHDQ86WU2 507 aa24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 SUPT20HQ8NEM7 779 aa24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 KLRG1Q96E93 195 aa24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 CWC25Q9NXE8 425 aaPredicted RBP24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 LTBP1Q14766 1721 aa24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 DUOX1Q9NRD9 1551 aa24.8■■□□□ 1.56
SMARCB1-204ENST00000407422 SLC4A2P04920 1241 aa24.79■■□□□ 1.56
SMARCB1-204ENST00000407422 VPS33BQ9H267 617 aa24.79■■□□□ 1.56
SMARCB1-204ENST00000407422 PCCAP05165 728 aaPredicted RBP24.79■■□□□ 1.56
SMARCB1-204ENST00000407422 TMC4Q7Z404 712 aa24.79■■□□□ 1.56
SMARCB1-204ENST00000407422 SPINK5Q9NQ38 1064 aaPredicted RBP24.79■■□□□ 1.56
SMARCB1-204ENST00000407422 ADAMTSL1Q8N6G6 1762 aa24.78■■□□□ 1.56
SMARCB1-204ENST00000407422 IGKV5-2P06315 115 aa24.78■■□□□ 1.56
SMARCB1-204ENST00000407422 SEC31BQ9NQW1 1179 aa24.77■■□□□ 1.56
SMARCB1-204ENST00000407422 SCNN1DP51172 638 aa24.76■■□□□ 1.55
SMARCB1-204ENST00000407422 KIAA2012Q0VF49 1180 aa24.76■■□□□ 1.55
SMARCB1-204ENST00000407422 ZNRF3Q9ULT6 936 aa24.76■■□□□ 1.55
SMARCB1-204ENST00000407422 CACNA1FO60840 1977 aa24.76■■□□□ 1.55
SMARCB1-204ENST00000407422 EXOSC9Q06265 439 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 NSFL1CQ9UNZ2 370 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 CLEC11AQ9Y240 323 aa24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 VAMP4O75379 141 aa24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 EPS15P42566 896 aa24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 RPS8P62241 208 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 CXCL9Q07325 125 aa24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 CWF19L2Q2TBE0 894 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 CCDC85AQ96PX6 553 aaPredicted RBP24.75■■□□□ 1.55
SMARCB1-204ENST00000407422 PDE8AO60658 829 aa24.74■■□□□ 1.55
SMARCB1-204ENST00000407422 PNMA8AQ86V59 439 aaPredicted RBP24.74■■□□□ 1.55
SMARCB1-204ENST00000407422 HSP90B1P14625 803 aaKnown RBP24.73■■□□□ 1.55
SMARCB1-204ENST00000407422 LMOD1P29536 600 aaPredicted RBP24.73■■□□□ 1.55
SMARCB1-204ENST00000407422 GPSM2P81274 684 aa24.73■■□□□ 1.55
SMARCB1-204ENST00000407422 FLIIQ13045 1269 aa24.73■■□□□ 1.55
SMARCB1-204ENST00000407422 PASKQ96RG2 1323 aa24.73■■□□□ 1.55
SMARCB1-204ENST00000407422 ITGBL1O95965 494 aaPredicted RBP24.72■■□□□ 1.55
SMARCB1-204ENST00000407422 NEXNQ0ZGT2 675 aa24.72■■□□□ 1.55
SMARCB1-204ENST00000407422 POLLQ9UGP5 575 aa24.72■■□□□ 1.55
SMARCB1-204ENST00000407422 CCDC152Q4G0S7 254 aa24.72■■□□□ 1.55
SMARCB1-204ENST00000407422 MAP1SQ66K74 1059 aaPredicted RBP24.72■■□□□ 1.55
SMARCB1-204ENST00000407422 JMYQ8N9B5 988 aa24.72■■□□□ 1.55
SMARCB1-204ENST00000407422 CDHR2Q9BYE9 1310 aa24.71■■□□□ 1.55
SMARCB1-204ENST00000407422 MYH3P11055 1940 aa24.71■■□□□ 1.55
SMARCB1-204ENST00000407422 NEURL1BA8MQ27 555 aa24.71■■□□□ 1.55
SMARCB1-204ENST00000407422 RAD17O75943 681 aa24.71■■□□□ 1.55
SMARCB1-204ENST00000407422 YDJCA8MPS7 323 aa24.7■■□□□ 1.54
SMARCB1-204ENST00000407422 WASHC4Q2M389 1173 aa24.7■■□□□ 1.54
SMARCB1-204ENST00000407422 C6orf229H3BNL8 230 aa24.69■■□□□ 1.54
SMARCB1-204ENST00000407422 RIMBP2O15034 1052 aa24.69■■□□□ 1.54
SMARCB1-204ENST00000407422 FKBP5Q13451 457 aaPredicted RBP24.69■■□□□ 1.54
SMARCB1-204ENST00000407422 GPR101Q96P66 508 aaPredicted RBP24.69■■□□□ 1.54
SMARCB1-204ENST00000407422 CREBZFQ9NS37 354 aa24.69■■□□□ 1.54
SMARCB1-204ENST00000407422 CIAPIN1Q6FI81 312 aa24.68■■□□□ 1.54
SMARCB1-204ENST00000407422 CNTROBQ8N137 903 aa24.68■■□□□ 1.54
SMARCB1-204ENST00000407422 GPRC5DQ9NZD1 345 aa24.68■■□□□ 1.54
SMARCB1-204ENST00000407422 GMPSP49915 693 aaPredicted RBP24.68■■□□□ 1.54
SMARCB1-204ENST00000407422 CTSWP56202 376 aa24.68■■□□□ 1.54
SMARCB1-204ENST00000407422 TBC1D16Q8TBP0 767 aa24.68■■□□□ 1.54
SMARCB1-204ENST00000407422 MYH16Q9H6N6 1097 aa24.68■■□□□ 1.54
SMARCB1-204ENST00000407422 UBE3BQ7Z3V4 1068 aa24.67■■□□□ 1.54
SMARCB1-204ENST00000407422 DBNDD1Q9H9R9 158 aa24.67■■□□□ 1.54
SMARCB1-204ENST00000407422 TTLL11Q8NHH1 800 aa24.66■■□□□ 1.54
SMARCB1-204ENST00000407422 DNAAF4Q8WXU2 420 aa24.66■■□□□ 1.54
SMARCB1-204ENST00000407422 SPEF2Q9C093 1822 aa24.66■■□□□ 1.54
SMARCB1-204ENST00000407422 H7C1W4 665 aa24.65■■□□□ 1.54
SMARCB1-204ENST00000407422 GCKRQ14397 625 aa24.65■■□□□ 1.54
SMARCB1-204ENST00000407422 TNIP1Q15025 636 aa24.65■■□□□ 1.54
SMARCB1-204ENST00000407422 USP50Q70EL3 339 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-204ENST00000407422 ANKIB1Q9P2G1 1089 aa24.65■■□□□ 1.54
SMARCB1-204ENST00000407422 GREM2Q9H772 168 aa24.64■■□□□ 1.54
SMARCB1-204ENST00000407422 PODXL2Q9NZ53 605 aa24.64■■□□□ 1.54
SMARCB1-204ENST00000407422 MKRN1Q9UHC7 482 aaKnown RBP24.64■■□□□ 1.54
SMARCB1-204ENST00000407422 ZNF521Q96K83 1311 aa24.64■■□□□ 1.54
SMARCB1-204ENST00000407422 DOK7Q18PE1 504 aa24.64■■□□□ 1.53
SMARCB1-204ENST00000407422 ANKRD18AQ8IVF6 992 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms