RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
PDGFA-203ENST00000402802 TAF3Q5VWG9 929 aa19.21■□□□□ 0.67
PDGFA-203ENST00000402802 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
PDGFA-203ENST00000402802 TSPY26PQ9H489 355 aa19.21■□□□□ 0.67
PDGFA-203ENST00000402802 A0A087WZG4 1122 aa19.2■□□□□ 0.66
PDGFA-203ENST00000402802 ATP6V1AP38606 617 aa19.2■□□□□ 0.66
PDGFA-203ENST00000402802 NOLC1Q14978 699 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDGFA-203ENST00000402802 UTYO14607 1347 aa19.2■□□□□ 0.66
PDGFA-203ENST00000402802 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
PDGFA-203ENST00000402802 ITPK1Q13572 414 aa19.2■□□□□ 0.66
PDGFA-203ENST00000402802 LOC102724428A0A0B4J2F2 783 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 SIK1P57059 783 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 TAF7LQ5H9L4 462 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 KLHDC4Q8TBB5 520 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 LRRCC1Q9C099 1032 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 PALLDQ8WX93 1383 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 AFDNP55196 1824 aaKnown RBP19.19■□□□□ 0.66
PDGFA-203ENST00000402802 RNF214Q8ND24 703 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 NAP1L2Q9ULW6 460 aaPredicted RBP19.19■□□□□ 0.66
PDGFA-203ENST00000402802 EP400Q96L91 3159 aa19.19■□□□□ 0.66
PDGFA-203ENST00000402802 TJP1Q07157 1748 aa19.18■□□□□ 0.66
PDGFA-203ENST00000402802 HLFQ16534 295 aa19.18■□□□□ 0.66
PDGFA-203ENST00000402802 USP26Q9BXU7 913 aa19.18■□□□□ 0.66
PDGFA-203ENST00000402802 NSFL1CQ9UNZ2 370 aaKnown RBP19.18■□□□□ 0.66
PDGFA-203ENST00000402802 TSC1Q92574 1164 aa19.18■□□□□ 0.66
PDGFA-203ENST00000402802 NUP188Q5SRE5 1749 aa19.18■□□□□ 0.66
PDGFA-203ENST00000402802 ST18O60284 1047 aa19.17■□□□□ 0.66
PDGFA-203ENST00000402802 UVSSAQ2YD98 709 aa19.17■□□□□ 0.66
PDGFA-203ENST00000402802 SPTLC3Q9NUV7 552 aa19.17■□□□□ 0.66
PDGFA-203ENST00000402802 TBC1D2BQ9UPU7 963 aa19.17■□□□□ 0.66
PDGFA-203ENST00000402802 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
PDGFA-203ENST00000402802 MTX1Q13505 466 aa19.16■□□□□ 0.66
PDGFA-203ENST00000402802 KIF6Q6ZMV9 814 aa19.16■□□□□ 0.66
PDGFA-203ENST00000402802 ZGPATQ8N5A5 531 aaKnown RBP19.16■□□□□ 0.66
PDGFA-203ENST00000402802 SIL1Q9H173 461 aa19.16■□□□□ 0.66
PDGFA-203ENST00000402802 GPTP24298 496 aa19.16■□□□□ 0.66
PDGFA-203ENST00000402802 NUTM1Q86Y26 1132 aa19.16■□□□□ 0.66
PDGFA-203ENST00000402802 QTRT2Q9H974 415 aaKnown RBP19.16■□□□□ 0.66
PDGFA-203ENST00000402802 THSD7AQ9UPZ6 1657 aa19.15■□□□□ 0.66
PDGFA-203ENST00000402802 CRKLP46109 303 aaKnown RBP19.15■□□□□ 0.66
PDGFA-203ENST00000402802 CASP7P55210 303 aa19.15■□□□□ 0.66
PDGFA-203ENST00000402802 OS9Q13438 667 aaPredicted RBP19.15■□□□□ 0.66
PDGFA-203ENST00000402802 INTS5Q6P9B9 1019 aaKnown RBP19.15■□□□□ 0.66
PDGFA-203ENST00000402802 SMIM5Q71RC9 77 aa19.15■□□□□ 0.66
PDGFA-203ENST00000402802 SEPT12Q8IYM1 358 aa19.15■□□□□ 0.66
PDGFA-203ENST00000402802 PDCL2Q8N4E4 241 aa19.15■□□□□ 0.66
PDGFA-203ENST00000402802 FAM184AQ8NB25 1140 aa19.15■□□□□ 0.66
PDGFA-203ENST00000402802 BCL2L12Q9HB09 334 aa19.15■□□□□ 0.66
PDGFA-203ENST00000402802 CWC25Q9NXE8 425 aaPredicted RBP19.15■□□□□ 0.66
PDGFA-203ENST00000402802 TRPC5Q9UL62 973 aaPredicted RBP19.15■□□□□ 0.66
PDGFA-203ENST00000402802 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.15■□□□□ 0.66
PDGFA-203ENST00000402802 RHPN1Q8TCX5 695 aa19.14■□□□□ 0.66
PDGFA-203ENST00000402802 ATRNO75882 1429 aa19.14■□□□□ 0.65
PDGFA-203ENST00000402802 TTC22Q5TAA0 569 aa19.14■□□□□ 0.65
PDGFA-203ENST00000402802 MAP3K15Q6ZN16 1313 aa19.13■□□□□ 0.65
PDGFA-203ENST00000402802 PHF14O94880 888 aa19.13■□□□□ 0.65
PDGFA-203ENST00000402802 PDE1AP54750 535 aa19.13■□□□□ 0.65
PDGFA-203ENST00000402802 TCIRG1Q13488 830 aa19.13■□□□□ 0.65
PDGFA-203ENST00000402802 SYNE4Q8N205 404 aa19.13■□□□□ 0.65
PDGFA-203ENST00000402802 H7C1W4 665 aa19.12■□□□□ 0.65
PDGFA-203ENST00000402802 DZIP3Q86Y13 1208 aaKnown RBP19.12■□□□□ 0.65
PDGFA-203ENST00000402802 ISCA1Q9BUE6 129 aa19.12■□□□□ 0.65
PDGFA-203ENST00000402802 CCDC87Q9NVE4 849 aa19.12■□□□□ 0.65
PDGFA-203ENST00000402802 CHMP3Q9Y3E7 222 aa19.12■□□□□ 0.65
PDGFA-203ENST00000402802 SALL3Q9BXA9 1300 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 ANKRD7Q92527 254 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 LMBR1LQ6UX01 489 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 CCDC191Q8NCU4 936 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 LINC00116Q8NCU8 138 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 FEZ1Q99689 392 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 HDAC5Q9UQL6 1122 aa19.11■□□□□ 0.65
PDGFA-203ENST00000402802 RAB11FIP3O75154 756 aa19.1■□□□□ 0.65
PDGFA-203ENST00000402802 MX1P20591 662 aa19.1■□□□□ 0.65
PDGFA-203ENST00000402802 IL6STP40189 918 aaPredicted RBP19.1■□□□□ 0.65
PDGFA-203ENST00000402802 GIGYF2Q6Y7W6 1299 aaKnown RBP19.1■□□□□ 0.65
PDGFA-203ENST00000402802 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
PDGFA-203ENST00000402802 CCDC85AQ96PX6 553 aaPredicted RBP19.1■□□□□ 0.65
PDGFA-203ENST00000402802 DIAPH3Q9NSV4 1193 aa19.1■□□□□ 0.65
PDGFA-203ENST00000402802 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
PDGFA-203ENST00000402802 SDSP20132 328 aa19.09■□□□□ 0.65
PDGFA-203ENST00000402802 FOXO4P98177 505 aa19.09■□□□□ 0.65
PDGFA-203ENST00000402802 SMARCC1Q92922 1105 aaPredicted RBP19.09■□□□□ 0.65
PDGFA-203ENST00000402802 EIF5P55010 431 aaKnown RBP19.09■□□□□ 0.65
PDGFA-203ENST00000402802 TMEM51Q9NW97 253 aa19.09■□□□□ 0.65
PDGFA-203ENST00000402802 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.65
PDGFA-203ENST00000402802 ZNF830Q96NB3 372 aaPredicted RBP19.08■□□□□ 0.65
PDGFA-203ENST00000402802 SPDYE4A6NLX3 237 aa19.08■□□□□ 0.64
PDGFA-203ENST00000402802 SASH1O94885 1247 aa19.08■□□□□ 0.64
PDGFA-203ENST00000402802 BRD1O95696 1058 aa19.08■□□□□ 0.64
PDGFA-203ENST00000402802 RFX5P48382 616 aaPredicted RBP19.08■□□□□ 0.64
PDGFA-203ENST00000402802 FAM177BA6PVY3 158 aa19.07■□□□□ 0.64
PDGFA-203ENST00000402802 ONECUT3O60422 494 aaPredicted RBP19.07■□□□□ 0.64
PDGFA-203ENST00000402802 MAP4K4O95819 1239 aaPredicted RBP19.07■□□□□ 0.64
PDGFA-203ENST00000402802 RABL6Q3YEC7 729 aaPredicted RBP19.07■□□□□ 0.64
PDGFA-203ENST00000402802 PTPN12Q05209 780 aaKnown RBP19.07■□□□□ 0.64
PDGFA-203ENST00000402802 CHAF1AQ13111 956 aaPredicted RBP19.07■□□□□ 0.64
PDGFA-203ENST00000402802 TTC12Q9H892 705 aaPredicted RBP19.07■□□□□ 0.64
PDGFA-203ENST00000402802 CTIFO43310 598 aaKnown RBP19.06■□□□□ 0.64
PDGFA-203ENST00000402802 G3BP1Q13283 466 aaKnown RBP eCLIP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms