RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 RARSP54136 660 aaKnown RBP24.4■■□□□ 1.5
RTN4-207ENST00000402434 GRIPAP1Q4V328 841 aa24.4■■□□□ 1.5
RTN4-207ENST00000402434 UBE3BQ7Z3V4 1068 aa24.4■■□□□ 1.5
RTN4-207ENST00000402434 CASP7P55210 303 aa24.39■■□□□ 1.5
RTN4-207ENST00000402434 GRAPQ13588 217 aa24.39■■□□□ 1.5
RTN4-207ENST00000402434 GRAPLQ8TC17 118 aaPredicted RBP24.39■■□□□ 1.5
RTN4-207ENST00000402434 ATP6V0A2Q9Y487 856 aa24.39■■□□□ 1.5
RTN4-207ENST00000402434 ALDH1L1O75891 902 aa24.38■■□□□ 1.49
RTN4-207ENST00000402434 FKBP4Q02790 459 aaKnown RBP eCLIP24.38■■□□□ 1.49
RTN4-207ENST00000402434 SLC4A10Q6U841 1118 aa24.38■■□□□ 1.49
RTN4-207ENST00000402434 PLA2G12BQ9BX93 195 aa24.38■■□□□ 1.49
RTN4-207ENST00000402434 CCDC152Q4G0S7 254 aa24.37■■□□□ 1.49
RTN4-207ENST00000402434 TMC4Q7Z404 712 aa24.37■■□□□ 1.49
RTN4-207ENST00000402434 SP8Q8IXZ3 490 aa24.37■■□□□ 1.49
RTN4-207ENST00000402434 PSMD1Q99460 953 aa24.37■■□□□ 1.49
RTN4-207ENST00000402434 CTSWP56202 376 aa24.36■■□□□ 1.49
RTN4-207ENST00000402434 SLC51AQ86UW1 340 aa24.36■■□□□ 1.49
RTN4-207ENST00000402434 TTLL11Q8NHH1 800 aa24.36■■□□□ 1.49
RTN4-207ENST00000402434 CELF1Q92879 486 aaKnown RBP24.36■■□□□ 1.49
RTN4-207ENST00000402434 SRCIN1Q9C0H9 1055 aa24.36■■□□□ 1.49
RTN4-207ENST00000402434 TAF1P21675 1872 aa24.36■■□□□ 1.49
RTN4-207ENST00000402434 CCDC88AQ3V6T2 1871 aa24.36■■□□□ 1.49
RTN4-207ENST00000402434 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
RTN4-207ENST00000402434 RPS8P62241 208 aaKnown RBP24.34■■□□□ 1.49
RTN4-207ENST00000402434 TMX4Q9H1E5 349 aaPredicted RBP24.34■■□□□ 1.49
RTN4-207ENST00000402434 SEC31BQ9NQW1 1179 aa24.34■■□□□ 1.49
RTN4-207ENST00000402434 NOB1Q9ULX3 412 aaKnown RBP24.34■■□□□ 1.49
RTN4-207ENST00000402434 GRM8O00222 908 aa24.33■■□□□ 1.49
RTN4-207ENST00000402434 MYH3P11055 1940 aa24.32■■□□□ 1.48
RTN4-207ENST00000402434 RTL9Q8NET4 1388 aa24.32■■□□□ 1.48
RTN4-207ENST00000402434 CSF1RP07333 972 aa24.32■■□□□ 1.48
RTN4-207ENST00000402434 DICER1Q9UPY3 1922 aaKnown RBP24.32■■□□□ 1.48
RTN4-207ENST00000402434 COL4A1P02462 1669 aa24.31■■□□□ 1.48
RTN4-207ENST00000402434 ARHGAP45Q92619 1136 aa24.31■■□□□ 1.48
RTN4-207ENST00000402434 CCDC85AQ96PX6 553 aaPredicted RBP24.31■■□□□ 1.48
RTN4-207ENST00000402434 ZNF277Q9NRM2 450 aaPredicted RBP24.31■■□□□ 1.48
RTN4-207ENST00000402434 C9orf78Q9NZ63 289 aaPredicted RBP24.31■■□□□ 1.48
RTN4-207ENST00000402434 KIF16BQ96L93 1317 aa24.3■■□□□ 1.48
RTN4-207ENST00000402434 RTFDC1Q9BY42 306 aaPredicted RBP24.3■■□□□ 1.48
RTN4-207ENST00000402434 UTYO14607 1347 aa24.3■■□□□ 1.48
RTN4-207ENST00000402434 API5Q9BZZ5 524 aaKnown RBP24.29■■□□□ 1.48
RTN4-207ENST00000402434 GREM2Q9H772 168 aa24.29■■□□□ 1.48
RTN4-207ENST00000402434 GPBP1L1Q9HC44 474 aaPredicted RBP24.29■■□□□ 1.48
RTN4-207ENST00000402434 IARSP41252 1262 aaKnown RBP24.28■■□□□ 1.48
RTN4-207ENST00000402434 FOXO4P98177 505 aa24.28■■□□□ 1.48
RTN4-207ENST00000402434 MPNDQ8N594 471 aa24.28■■□□□ 1.48
RTN4-207ENST00000402434 LRRC37AA6NMS7 1700 aa24.28■■□□□ 1.48
RTN4-207ENST00000402434 BCAR3O75815 825 aa24.27■■□□□ 1.48
RTN4-207ENST00000402434 DPP8Q6V1X1 898 aaPredicted RBP24.27■■□□□ 1.48
RTN4-207ENST00000402434 ZNF526Q8TF50 670 aaPredicted RBP24.27■■□□□ 1.48
RTN4-207ENST00000402434 CDC5LQ99459 802 aaKnown RBP24.27■■□□□ 1.48
RTN4-207ENST00000402434 VPS33BQ9H267 617 aa24.27■■□□□ 1.48
RTN4-207ENST00000402434 NBPF7P0C2Y1 421 aaPredicted RBP24.26■■□□□ 1.47
RTN4-207ENST00000402434 ANKRD18AQ8IVF6 992 aa24.26■■□□□ 1.47
RTN4-207ENST00000402434 GLTPD2A6NH11 291 aa24.26■■□□□ 1.47
RTN4-207ENST00000402434 CCT4P50991 539 aaKnown RBP24.26■■□□□ 1.47
RTN4-207ENST00000402434 SUPT20HQ8NEM7 779 aa24.26■■□□□ 1.47
RTN4-207ENST00000402434 USP44Q9H0E7 712 aa24.26■■□□□ 1.47
RTN4-207ENST00000402434 TIAM2Q8IVF5 1701 aa24.25■■□□□ 1.47
RTN4-207ENST00000402434 IPO8O15397 1037 aaKnown RBP24.25■■□□□ 1.47
RTN4-207ENST00000402434 EPHA10Q5JZY3 1008 aa24.25■■□□□ 1.47
RTN4-207ENST00000402434 KDM2BQ8NHM5 1336 aa24.24■■□□□ 1.47
RTN4-207ENST00000402434 ITGA6P23229 1130 aa24.24■■□□□ 1.47
RTN4-207ENST00000402434 FAM161AQ3B820 660 aa24.24■■□□□ 1.47
RTN4-207ENST00000402434 KAZALD1Q96I82 304 aa24.24■■□□□ 1.47
RTN4-207ENST00000402434 BSDC1Q9NW68 430 aaPredicted RBP24.24■■□□□ 1.47
RTN4-207ENST00000402434 DPY19L2Q6NUT2 758 aa24.23■■□□□ 1.47
RTN4-207ENST00000402434 PODXL2Q9NZ53 605 aa24.23■■□□□ 1.47
RTN4-207ENST00000402434 NSFL1CQ9UNZ2 370 aaKnown RBP24.23■■□□□ 1.47
RTN4-207ENST00000402434 FZD9O00144 591 aa24.22■■□□□ 1.47
RTN4-207ENST00000402434 GPSM2P81274 684 aa24.22■■□□□ 1.47
RTN4-207ENST00000402434 LMBR1LQ6UX01 489 aa24.22■■□□□ 1.47
RTN4-207ENST00000402434 SUCLG2Q96I99 432 aa24.22■■□□□ 1.47
RTN4-207ENST00000402434 TRIM27P14373 513 aa24.21■■□□□ 1.47
RTN4-207ENST00000402434 LARGE2Q8N3Y3 721 aa24.21■■□□□ 1.47
RTN4-207ENST00000402434 JDP2Q8WYK2 163 aa24.21■■□□□ 1.47
RTN4-207ENST00000402434 DUOX1Q9NRD9 1551 aa24.21■■□□□ 1.47
RTN4-207ENST00000402434 AOC3Q16853 763 aa24.2■■□□□ 1.47
RTN4-207ENST00000402434 INTS3Q68E01 1043 aaKnown RBP24.2■■□□□ 1.47
RTN4-207ENST00000402434 ATF7IPQ6VMQ6 1270 aa24.2■■□□□ 1.47
RTN4-207ENST00000402434 POLLQ9UGP5 575 aa24.2■■□□□ 1.47
RTN4-207ENST00000402434 COL4A5P29400 1685 aa24.2■■□□□ 1.46
RTN4-207ENST00000402434 LTBP1Q14766 1721 aa24.2■■□□□ 1.46
RTN4-207ENST00000402434 ANKRD18BA2A2Z9 1011 aa24.19■■□□□ 1.46
RTN4-207ENST00000402434 PPIP5K2O43314 1243 aa24.19■■□□□ 1.46
RTN4-207ENST00000402434 IGHMBP2P38935 993 aaKnown RBP24.19■■□□□ 1.46
RTN4-207ENST00000402434 KIAA2012Q0VF49 1180 aa24.19■■□□□ 1.46
RTN4-207ENST00000402434 IFIT5Q13325 482 aaKnown RBP24.19■■□□□ 1.46
RTN4-207ENST00000402434 FRAT1Q92837 279 aaPredicted RBP24.19■■□□□ 1.46
RTN4-207ENST00000402434 NMRK2Q9NPI5 230 aa24.19■■□□□ 1.46
RTN4-207ENST00000402434 KIF3CO14782 793 aa24.19■■□□□ 1.46
RTN4-207ENST00000402434 RABL6Q3YEC7 729 aaPredicted RBP24.19■■□□□ 1.46
RTN4-207ENST00000402434 TBC1D16Q8TBP0 767 aa24.19■■□□□ 1.46
RTN4-207ENST00000402434 MINPP1Q9UNW1 487 aa24.19■■□□□ 1.46
RTN4-207ENST00000402434 BICC1Q9H694 974 aaKnown RBP24.18■■□□□ 1.46
RTN4-207ENST00000402434 ANKIB1Q9P2G1 1089 aa24.18■■□□□ 1.46
RTN4-207ENST00000402434 ZKSCAN2Q63HK3 967 aa24.17■■□□□ 1.46
RTN4-207ENST00000402434 CHMP3Q9Y3E7 222 aa24.17■■□□□ 1.46
RTN4-207ENST00000402434 XDHP47989 1333 aa24.16■■□□□ 1.46
RTN4-207ENST00000402434 DDNO94850 711 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms