RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 GYS1P13807 737 aa19.39■□□□□ 0.69
CHRFAM7A-203ENST00000401522 CCDC191Q8NCU4 936 aa19.39■□□□□ 0.69
CHRFAM7A-203ENST00000401522 GRPEL1Q9HAV7 217 aa19.39■□□□□ 0.69
CHRFAM7A-203ENST00000401522 ST18O60284 1047 aa19.38■□□□□ 0.69
CHRFAM7A-203ENST00000401522 PDE1AP54750 535 aa19.38■□□□□ 0.69
CHRFAM7A-203ENST00000401522 NUCB2P80303 420 aa19.38■□□□□ 0.69
CHRFAM7A-203ENST00000401522 GCKRQ14397 625 aa19.37■□□□□ 0.69
CHRFAM7A-203ENST00000401522 ANKRD36CQ5JPF3 1778 aa19.37■□□□□ 0.69
CHRFAM7A-203ENST00000401522 USP44Q9H0E7 712 aa19.37■□□□□ 0.69
CHRFAM7A-203ENST00000401522 CWC22Q9HCG8 908 aaKnown RBP19.37■□□□□ 0.69
CHRFAM7A-203ENST00000401522 TBC1D9BQ66K14 1250 aa19.36■□□□□ 0.69
CHRFAM7A-203ENST00000401522 NLRP10Q86W26 655 aa19.36■□□□□ 0.69
CHRFAM7A-203ENST00000401522 CWC25Q9NXE8 425 aaPredicted RBP19.36■□□□□ 0.69
CHRFAM7A-203ENST00000401522 NIP7Q9Y221 180 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHRFAM7A-203ENST00000401522 GPTP24298 496 aa19.35■□□□□ 0.69
CHRFAM7A-203ENST00000401522 PARP10Q53GL7 1025 aa19.35■□□□□ 0.69
CHRFAM7A-203ENST00000401522 PANK2Q9BZ23 570 aa19.35■□□□□ 0.69
CHRFAM7A-203ENST00000401522 UBN2Q6ZU65 1347 aa19.35■□□□□ 0.69
CHRFAM7A-203ENST00000401522 ATP8B2P98198 1209 aa19.35■□□□□ 0.69
CHRFAM7A-203ENST00000401522 NLGN1Q8N2Q7 840 aa19.35■□□□□ 0.69
CHRFAM7A-203ENST00000401522 LRRCC1Q9C099 1032 aa19.35■□□□□ 0.69
CHRFAM7A-203ENST00000401522 UTYO14607 1347 aa19.34■□□□□ 0.69
CHRFAM7A-203ENST00000401522 SALL3Q9BXA9 1300 aa19.34■□□□□ 0.69
CHRFAM7A-203ENST00000401522 BAG4O95429 457 aaKnown RBP19.34■□□□□ 0.69
CHRFAM7A-203ENST00000401522 SETDB2Q96T68 719 aa19.34■□□□□ 0.69
CHRFAM7A-203ENST00000401522 AFDNP55196 1824 aaKnown RBP19.34■□□□□ 0.69
CHRFAM7A-203ENST00000401522 GRM8O00222 908 aa19.33■□□□□ 0.69
CHRFAM7A-203ENST00000401522 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.69
CHRFAM7A-203ENST00000401522 TM4SF1P30408 202 aa19.33■□□□□ 0.68
CHRFAM7A-203ENST00000401522 NFIXQ14938 502 aa19.33■□□□□ 0.68
CHRFAM7A-203ENST00000401522 H7C1W4 665 aa19.32■□□□□ 0.68
CHRFAM7A-203ENST00000401522 CYP2E1P05181 493 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-203ENST00000401522 NBPF7P0C2Y1 421 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-203ENST00000401522 SUSD4Q5VX71 490 aa19.32■□□□□ 0.68
CHRFAM7A-203ENST00000401522 SLC16A10Q8TF71 515 aa19.32■□□□□ 0.68
CHRFAM7A-203ENST00000401522 PDGFDQ9GZP0 370 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-203ENST00000401522 EXOC6BQ9Y2D4 811 aa19.32■□□□□ 0.68
CHRFAM7A-203ENST00000401522 KLHL40Q2TBA0 621 aa19.31■□□□□ 0.68
CHRFAM7A-203ENST00000401522 BICDL1Q6ZP65 573 aa19.31■□□□□ 0.68
CHRFAM7A-203ENST00000401522 PPP1R42Q7Z4L9 355 aa19.31■□□□□ 0.68
CHRFAM7A-203ENST00000401522 ZBTB38Q8NAP3 1195 aaPredicted RBP19.31■□□□□ 0.68
CHRFAM7A-203ENST00000401522 RRAGDQ9NQL2 400 aaPredicted RBP19.31■□□□□ 0.68
CHRFAM7A-203ENST00000401522 MX1P20591 662 aa19.31■□□□□ 0.68
CHRFAM7A-203ENST00000401522 STAP2Q9UGK3 403 aa19.31■□□□□ 0.68
CHRFAM7A-203ENST00000401522 PCCAP05165 728 aaPredicted RBP19.3■□□□□ 0.68
CHRFAM7A-203ENST00000401522 CASP7P55210 303 aa19.3■□□□□ 0.68
CHRFAM7A-203ENST00000401522 R3HDM1Q15032 1099 aaKnown RBP19.3■□□□□ 0.68
CHRFAM7A-203ENST00000401522 UTP14AQ9BVJ6 771 aaKnown RBP19.3■□□□□ 0.68
CHRFAM7A-203ENST00000401522 AOX1Q06278 1338 aa19.3■□□□□ 0.68
CHRFAM7A-203ENST00000401522 CARMIL3Q8ND23 1372 aa19.3■□□□□ 0.68
CHRFAM7A-203ENST00000401522 UBTFL1P0CB47 393 aaPredicted RBP19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 TRMT112Q9UI30 125 aaKnown RBP19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 COL24A1Q17RW2 1714 aa19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 PNMA6EA0A0J9YXQ4 647 aa19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 NTSR2O95665 410 aa19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 UBE3BQ7Z3V4 1068 aa19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 ESYT1Q9BSJ8 1104 aa19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 HDAC5Q9UQL6 1122 aa19.29■□□□□ 0.68
CHRFAM7A-203ENST00000401522 MCCP23508 829 aa19.28■□□□□ 0.68
CHRFAM7A-203ENST00000401522 MCM2P49736 904 aa19.28■□□□□ 0.68
CHRFAM7A-203ENST00000401522 FAM89AQ96GI7 184 aa19.28■□□□□ 0.68
CHRFAM7A-203ENST00000401522 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
CHRFAM7A-203ENST00000401522 TPTE2Q6XPS3 522 aa19.27■□□□□ 0.68
CHRFAM7A-203ENST00000401522 GAS2L3Q86XJ1 694 aa19.27■□□□□ 0.68
CHRFAM7A-203ENST00000401522 LRRFIP2Q9Y608 721 aaKnown RBP19.27■□□□□ 0.68
CHRFAM7A-203ENST00000401522 DDX49Q9Y6V7 483 aaKnown RBP19.27■□□□□ 0.68
CHRFAM7A-203ENST00000401522 CASZ1Q86V15 1759 aa19.27■□□□□ 0.68
CHRFAM7A-203ENST00000401522 POLRMTO00411 1230 aaKnown RBP19.27■□□□□ 0.67
CHRFAM7A-203ENST00000401522 SOCS7O14512 581 aa19.27■□□□□ 0.67
CHRFAM7A-203ENST00000401522 ANAPC15P60006 121 aa19.27■□□□□ 0.67
CHRFAM7A-203ENST00000401522 NBPF5PQ86XG9 351 aaPredicted RBP19.27■□□□□ 0.67
CHRFAM7A-203ENST00000401522 JARID2Q92833 1246 aaPredicted RBP19.27■□□□□ 0.67
CHRFAM7A-203ENST00000401522 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.67
CHRFAM7A-203ENST00000401522 CDHR2Q9BYE9 1310 aa19.27■□□□□ 0.67
CHRFAM7A-203ENST00000401522 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
CHRFAM7A-203ENST00000401522 DDR1Q08345 913 aa19.26■□□□□ 0.67
CHRFAM7A-203ENST00000401522 SERPINB2P05120 415 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 MSL1Q68DK7 614 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 KAZALD1Q96I82 304 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 RAB11FIP3O75154 756 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 MMP10P09238 476 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 CHMLP26374 656 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 SYNE4Q8N205 404 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
CHRFAM7A-203ENST00000401522 PSDA5PKW4 1024 aaPredicted RBP19.24■□□□□ 0.67
CHRFAM7A-203ENST00000401522 EPB41L2O43491 1005 aaKnown RBP19.24■□□□□ 0.67
CHRFAM7A-203ENST00000401522 SLC10A5Q5PT55 438 aa19.24■□□□□ 0.67
CHRFAM7A-203ENST00000401522 MCTP1Q6DN14 999 aa19.24■□□□□ 0.67
CHRFAM7A-203ENST00000401522 NUTM1Q86Y26 1132 aa19.24■□□□□ 0.67
CHRFAM7A-203ENST00000401522 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
CHRFAM7A-203ENST00000401522 PLA2G12BQ9BX93 195 aa19.24■□□□□ 0.67
CHRFAM7A-203ENST00000401522 IRS4O14654 1257 aaPredicted RBP19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 TSHZ3Q63HK5 1081 aa19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 MTFR1LQ9H019 292 aa19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 HSP90B1P14625 803 aaKnown RBP19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 CLCN1P35523 988 aa19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 ERFEQ4G0M1 354 aa19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 ZGPATQ8N5A5 531 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms