RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 CHMP4CQ96CF2 233 aa10.45□□□□□ -0.74
LINC01139-201ENST00000400946 ZKSCAN5Q9Y2L8 839 aa10.45□□□□□ -0.74
LINC01139-201ENST00000400946 RGPD5Q99666 1765 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 C5P01031 1676 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 MED23Q9ULK4 1368 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 ELP1O95163 1332 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 SOS2Q07890 1332 aaPredicted RBP10.44□□□□□ -0.74
LINC01139-201ENST00000400946 SPATA31A6Q5VVP1 1343 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 SASH1O94885 1247 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 ATP5JP18859 108 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 CASTP20810 708 aaKnown RBP10.44□□□□□ -0.74
LINC01139-201ENST00000400946 RABL6Q3YEC7 729 aaPredicted RBP10.44□□□□□ -0.74
LINC01139-201ENST00000400946 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 IFNL2Q8IZJ0 200 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 KAZALD1Q96I82 304 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 SUCLG2Q96I99 432 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
LINC01139-201ENST00000400946 NEURL1BA8MQ27 555 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 RRP9O43818 475 aaKnown RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 SNRPA1P09661 255 aaKnown RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 PHKG2P15735 406 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 GCKRQ14397 625 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 CREB3L3Q68CJ9 461 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 EAF2Q96CJ1 260 aaPredicted RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 JAKMIP1Q96N16 626 aaKnown RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 RBM8AQ9Y5S9 174 aaKnown RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 KDM6AO15550 1401 aaPredicted RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 CPDO75976 1380 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 IGKV5-2P06315 115 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 TPM3P06753 285 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 PROSER3Q2NL68 480 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 BICC1Q9H694 974 aaKnown RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 GPR108Q9NPR9 543 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 RGS17Q9UGC6 210 aaPredicted RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 NSFL1CQ9UNZ2 370 aaKnown RBP10.43□□□□□ -0.74
LINC01139-201ENST00000400946 MTMR6Q9Y217 621 aa10.43□□□□□ -0.74
LINC01139-201ENST00000400946 SPEF2Q9C093 1822 aa10.42□□□□□ -0.74
LINC01139-201ENST00000400946 PTH1RQ03431 593 aa10.42□□□□□ -0.74
LINC01139-201ENST00000400946 CWF19L2Q2TBE0 894 aaKnown RBP10.42□□□□□ -0.74
LINC01139-201ENST00000400946 PRPF40BQ6NWY9 871 aaKnown RBP10.42□□□□□ -0.74
LINC01139-201ENST00000400946 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
LINC01139-201ENST00000400946 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
LINC01139-201ENST00000400946 CDAN1Q8IWY9 1227 aa10.42□□□□□ -0.74
LINC01139-201ENST00000400946 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
LINC01139-201ENST00000400946 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
LINC01139-201ENST00000400946 TCHHQ07283 1943 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 LRP6O75581 1613 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 SLC27A2O14975 620 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 MAP4K4O95819 1239 aaPredicted RBP10.41□□□□□ -0.74
LINC01139-201ENST00000400946 ANXA1P04083 346 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 GJB2P29033 226 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 KCNJ4P48050 445 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 NMIQ13287 307 aaPredicted RBP10.41□□□□□ -0.74
LINC01139-201ENST00000400946 LRP10Q7Z4F1 713 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 AXIN2Q9Y2T1 843 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 ARFGEF2Q9Y6D5 1785 aa10.41□□□□□ -0.74
LINC01139-201ENST00000400946 AFDNP55196 1824 aaKnown RBP10.4□□□□□ -0.74
LINC01139-201ENST00000400946 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
LINC01139-201ENST00000400946 RPS6KB1P23443 525 aa10.4□□□□□ -0.74
LINC01139-201ENST00000400946 RFX5P48382 616 aaPredicted RBP10.4□□□□□ -0.74
LINC01139-201ENST00000400946 KRT85P78386 507 aa10.4□□□□□ -0.74
LINC01139-201ENST00000400946 TTC5Q8N0Z6 440 aa10.4□□□□□ -0.74
LINC01139-201ENST00000400946 PLBD2Q8NHP8 589 aa10.4□□□□□ -0.74
LINC01139-201ENST00000400946 FSD1Q9BTV5 496 aa10.4□□□□□ -0.74
LINC01139-201ENST00000400946 SCAND2PQ9GZW5 306 aaPredicted RBP10.4□□□□□ -0.74
LINC01139-201ENST00000400946 ATG3Q9NT62 314 aa10.4□□□□□ -0.74
LINC01139-201ENST00000400946 PA2G4Q9UQ80 394 aaKnown RBP10.4□□□□□ -0.74
LINC01139-201ENST00000400946 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
LINC01139-201ENST00000400946 CAVIN2O95810 425 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 ME3Q16798 604 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 NOL8Q76FK4 1167 aaKnown RBP10.39□□□□□ -0.75
LINC01139-201ENST00000400946 COPS6Q7L5N1 327 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 XAGE3Q8WTP9 111 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 MS4A3Q96HJ5 214 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 MAP7D2Q96T17 732 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 LLPHQ9BRT6 129 aaKnown RBP10.39□□□□□ -0.75
LINC01139-201ENST00000400946 CNPY2Q9Y2B0 182 aa10.39□□□□□ -0.75
LINC01139-201ENST00000400946 TAF5LO75529 589 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 XPCQ01831 940 aaPredicted RBP10.38□□□□□ -0.75
LINC01139-201ENST00000400946 ADCK5Q3MIX3 580 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 TNNI3KQ59H18 835 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 FOXD4L5Q5VV16 416 aaPredicted RBP10.38□□□□□ -0.75
LINC01139-201ENST00000400946 LARP1BQ659C4 914 aaKnown RBP10.38□□□□□ -0.75
LINC01139-201ENST00000400946 ATL3Q6DD88 541 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 CCDC83Q8IWF9 413 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 RGS22Q8NE09 1264 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC01139-201ENST00000400946 FOXD4L4Q8WXT5 416 aaPredicted RBP10.38□□□□□ -0.75
LINC01139-201ENST00000400946 HAUS7Q99871 368 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 FUCA2Q9BTY2 467 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
LINC01139-201ENST00000400946 USP25Q9UHP3 1055 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 KIF3AQ9Y496 699 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 FPGT-TNNI3KV9GXZ4 949 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 UBR2Q8IWV8 1755 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 TNS3Q68CZ2 1445 aa10.38□□□□□ -0.75
LINC01139-201ENST00000400946 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms