RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SMIM5Q71RC9 77 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 C2CD5Q86YS7 1000 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 TTLL6Q8N841 843 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 GRAPLQ8TC17 118 aaPredicted RBP9.48□□□□□ -0.89
USP16-204ENST00000399976 USP44Q9H0E7 712 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 DDX19BQ9UMR2 479 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 FOXO4P98177 505 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 PSMD1Q99460 953 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 TAF1P21675 1872 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 SCN4AP35499 1836 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 C15orf52Q6ZUT6 534 aaKnown RBP9.47□□□□□ -0.89
USP16-204ENST00000399976 SP8Q8IXZ3 490 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 IGSF3O75054 1194 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 BCAR3O75815 825 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 GPTP24298 496 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 MVPQ14764 893 aaKnown RBP9.47□□□□□ -0.89
USP16-204ENST00000399976 DALRD3Q5D0E6 543 aaKnown RBP9.47□□□□□ -0.89
USP16-204ENST00000399976 RTKN2Q8IZC4 609 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
USP16-204ENST00000399976 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
USP16-204ENST00000399976 DPEP1P16444 411 aa9.46□□□□□ -0.89
USP16-204ENST00000399976 ATP6V0A2Q9Y487 856 aa9.46□□□□□ -0.89
USP16-204ENST00000399976 COL4A1P02462 1669 aa9.46□□□□□ -0.89
USP16-204ENST00000399976 CIAO1O76071 339 aa9.46□□□□□ -0.9
USP16-204ENST00000399976 RRP1P56182 461 aaKnown RBP9.46□□□□□ -0.9
USP16-204ENST00000399976 CWF19L2Q2TBE0 894 aaKnown RBP9.46□□□□□ -0.9
USP16-204ENST00000399976 SUPT20HQ8NEM7 779 aa9.46□□□□□ -0.9
USP16-204ENST00000399976 RPGRQ92834 1020 aaKnown RBP9.46□□□□□ -0.9
USP16-204ENST00000399976 ECM29Q5VYK3 1845 aa9.46□□□□□ -0.9
USP16-204ENST00000399976 ATP5J2-PTCD1G3V325 749 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 GTF2E1P29083 439 aaPredicted RBP9.45□□□□□ -0.9
USP16-204ENST00000399976 MMP14P50281 582 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 DDX46Q7L014 1031 aaKnown RBP9.45□□□□□ -0.9
USP16-204ENST00000399976 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
USP16-204ENST00000399976 C9orf78Q9NZ63 289 aaPredicted RBP9.45□□□□□ -0.9
USP16-204ENST00000399976 MAST2Q6P0Q8 1798 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 F6X3S4 739 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 ZBTB7BO15156 539 aaPredicted RBP9.45□□□□□ -0.9
USP16-204ENST00000399976 UBTFL1P0CB47 393 aaPredicted RBP9.45□□□□□ -0.9
USP16-204ENST00000399976 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 BICDL1Q6ZP65 573 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 FTSJ3Q8IY81 847 aaKnown RBP9.45□□□□□ -0.9
USP16-204ENST00000399976 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 KAZALD1Q96I82 304 aa9.45□□□□□ -0.9
USP16-204ENST00000399976 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
USP16-204ENST00000399976 UBE3BQ7Z3V4 1068 aa9.44□□□□□ -0.9
USP16-204ENST00000399976 FAM89AQ96GI7 184 aa9.44□□□□□ -0.9
USP16-204ENST00000399976 GNAI2P04899 355 aa9.44□□□□□ -0.9
USP16-204ENST00000399976 POLA2Q14181 598 aa9.44□□□□□ -0.9
USP16-204ENST00000399976 NLGN2Q8NFZ4 835 aa9.44□□□□□ -0.9
USP16-204ENST00000399976 ANKRD2Q9GZV1 360 aa9.44□□□□□ -0.9
USP16-204ENST00000399976 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
USP16-204ENST00000399976 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
USP16-204ENST00000399976 NUTM1Q86Y26 1132 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 RPAP2Q8IXW5 612 aaPredicted RBP9.43□□□□□ -0.9
USP16-204ENST00000399976 TMEM57Q8N5G2 664 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 COPRSQ9NQ92 184 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 MED23Q9ULK4 1368 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 ANKRD18BA2A2Z9 1011 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 FKBP4Q02790 459 aaKnown RBP eCLIP9.43□□□□□ -0.9
USP16-204ENST00000399976 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 ZBTB40Q9NUA8 1239 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 MROH5Q6ZUA9 1318 aa9.43□□□□□ -0.9
USP16-204ENST00000399976 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
USP16-204ENST00000399976 NPHP1O15259 732 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
USP16-204ENST00000399976 BCL2L13Q9BXK5 485 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 NOP58Q9Y2X3 529 aaKnown RBP9.42□□□□□ -0.9
USP16-204ENST00000399976 DOCK2Q92608 1830 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 NBPF7P0C2Y1 421 aaPredicted RBP9.42□□□□□ -0.9
USP16-204ENST00000399976 RPS8P62241 208 aaKnown RBP9.42□□□□□ -0.9
USP16-204ENST00000399976 ERICH6BQ5W0A0 696 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 ANKRD18AQ8IVF6 992 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 SSH3Q8TE77 659 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 GPR108Q9NPR9 543 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 LEMD3Q9Y2U8 911 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 ADAMTSL1Q8N6G6 1762 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 SLC4A10Q6U841 1118 aa9.42□□□□□ -0.9
USP16-204ENST00000399976 IFIT5Q13325 482 aaKnown RBP9.41□□□□□ -0.9
USP16-204ENST00000399976 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 XDHP47989 1333 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 PDS5AQ29RF7 1337 aaKnown RBP9.41□□□□□ -0.9
USP16-204ENST00000399976 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 A0A0G2JLW4 131 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 RLBP1P12271 317 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 HCLS1P14317 486 aaPredicted RBP9.41□□□□□ -0.9
USP16-204ENST00000399976 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 IGHMBP2P38935 993 aaKnown RBP9.41□□□□□ -0.9
USP16-204ENST00000399976 ATP8B2P98198 1209 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
USP16-204ENST00000399976 IRS2Q9Y4H2 1338 aa9.41□□□□□ -0.9
USP16-204ENST00000399976 ITGA6P23229 1130 aa9.4□□□□□ -0.9
USP16-204ENST00000399976 CHRNA5P30532 468 aa9.4□□□□□ -0.9
USP16-204ENST00000399976 BICC1Q9H694 974 aaKnown RBP9.4□□□□□ -0.9
USP16-204ENST00000399976 FKBP1AP62942 108 aaKnown RBP9.4□□□□□ -0.9
USP16-204ENST00000399976 CCDC57Q2TAC2 916 aa9.4□□□□□ -0.9
USP16-204ENST00000399976 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.9
USP16-204ENST00000399976 TMED8Q6PL24 325 aaPredicted RBP9.4□□□□□ -0.9
USP16-204ENST00000399976 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms