RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 CCDC191Q8NCU4 936 aa10.76□□□□□ -0.69
USP16-202ENST00000399973 RRAGCQ9HB90 399 aa10.76□□□□□ -0.69
USP16-202ENST00000399973 LTBP1Q14766 1721 aa10.75□□□□□ -0.69
USP16-202ENST00000399973 SCN4AP35499 1836 aa10.75□□□□□ -0.69
USP16-202ENST00000399973 VAMP4O75379 141 aa10.75□□□□□ -0.69
USP16-202ENST00000399973 IARSP41252 1262 aaKnown RBP10.75□□□□□ -0.69
USP16-202ENST00000399973 GRAPQ13588 217 aa10.75□□□□□ -0.69
USP16-202ENST00000399973 CC2D2BQ6DHV5 1058 aa10.75□□□□□ -0.69
USP16-202ENST00000399973 ZBTB38Q8NAP3 1195 aaPredicted RBP10.75□□□□□ -0.69
USP16-202ENST00000399973 GRAPLQ8TC17 118 aaPredicted RBP10.75□□□□□ -0.69
USP16-202ENST00000399973 CCDC85AQ96PX6 553 aaPredicted RBP10.75□□□□□ -0.69
USP16-202ENST00000399973 A0A1B0GUL6 1792 aa10.75□□□□□ -0.69
USP16-202ENST00000399973 GLTPD2A6NH11 291 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 E9PSI1 815 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 PCCAP05165 728 aaPredicted RBP10.74□□□□□ -0.69
USP16-202ENST00000399973 IGKV5-2P06315 115 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 HSP90B1P14625 803 aaKnown RBP10.74□□□□□ -0.69
USP16-202ENST00000399973 TRIM28Q13263 835 aaKnown RBP10.74□□□□□ -0.69
USP16-202ENST00000399973 DPY19L2Q6NUT2 758 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 UBE3BQ7Z3V4 1068 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 MIER1Q8N108 512 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 PSMD1Q99460 953 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 ATP6V0A2Q9Y487 856 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 ZNF541Q9H0D2 1346 aa10.74□□□□□ -0.69
USP16-202ENST00000399973 NEURL1BA8MQ27 555 aa10.73□□□□□ -0.69
USP16-202ENST00000399973 PPIP5K2O43314 1243 aa10.73□□□□□ -0.69
USP16-202ENST00000399973 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
USP16-202ENST00000399973 LARGE2Q8N3Y3 721 aa10.73□□□□□ -0.69
USP16-202ENST00000399973 DNAAF4Q8WXU2 420 aa10.73□□□□□ -0.69
USP16-202ENST00000399973 JDP2Q8WYK2 163 aa10.73□□□□□ -0.69
USP16-202ENST00000399973 CELF1Q92879 486 aaKnown RBP10.73□□□□□ -0.69
USP16-202ENST00000399973 F6X3S4 739 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 PDE8AO60658 829 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 BBOX1O75936 387 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 TOMM70O94826 608 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 DDNO94850 711 aaPredicted RBP10.72□□□□□ -0.69
USP16-202ENST00000399973 SF3B3Q15393 1217 aaKnown RBP10.72□□□□□ -0.69
USP16-202ENST00000399973 AOC3Q16853 763 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 CCDC152Q4G0S7 254 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 GRIPAP1Q4V328 841 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 NIM1KQ8IY84 436 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 MPNDQ8N594 471 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 BCL2L13Q9BXK5 485 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 CDHR2Q9BYE9 1310 aa10.72□□□□□ -0.69
USP16-202ENST00000399973 VEGFAP15692 232 aaPredicted RBP10.71□□□□□ -0.69
USP16-202ENST00000399973 CTSWP56202 376 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
USP16-202ENST00000399973 SLFN5Q08AF3 891 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 SLC4A10Q6U841 1118 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 TMC4Q7Z404 712 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 SP8Q8IXZ3 490 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 SUPT20HQ8NEM7 779 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 SEC31BQ9NQW1 1179 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
USP16-202ENST00000399973 GCKRQ14397 625 aa10.7□□□□□ -0.7
USP16-202ENST00000399973 LINS1Q8NG48 757 aa10.7□□□□□ -0.7
USP16-202ENST00000399973 RBM46Q8TBY0 533 aaKnown RBP10.7□□□□□ -0.7
USP16-202ENST00000399973 NSFL1CQ9UNZ2 370 aaKnown RBP10.7□□□□□ -0.7
USP16-202ENST00000399973 PSME4Q14997 1843 aa10.7□□□□□ -0.7
USP16-202ENST00000399973 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
USP16-202ENST00000399973 GPSM2P81274 684 aa10.69□□□□□ -0.7
USP16-202ENST00000399973 HNRNPUQ00839 825 aaKnown RBP eCLIP10.69□□□□□ -0.7
USP16-202ENST00000399973 ANKRD18AQ8IVF6 992 aa10.69□□□□□ -0.7
USP16-202ENST00000399973 GPR101Q96P66 508 aaPredicted RBP10.69□□□□□ -0.7
USP16-202ENST00000399973 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
USP16-202ENST00000399973 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
USP16-202ENST00000399973 ADAMTSL1Q8N6G6 1762 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 IQCA1LA6NCM1 817 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 HSPA6P17066 643 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 RPS8P62241 208 aaKnown RBP10.68□□□□□ -0.7
USP16-202ENST00000399973 FAM161AQ3B820 660 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
USP16-202ENST00000399973 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 SSH1Q8WYL5 1049 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 CDC5LQ99459 802 aaKnown RBP10.68□□□□□ -0.7
USP16-202ENST00000399973 GREM2Q9H772 168 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 ANKIB1Q9P2G1 1089 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 SCN9AQ15858 1988 aa10.68□□□□□ -0.7
USP16-202ENST00000399973 H7C1W4 665 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 FZD9O00144 591 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 UFL1O94874 794 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 LMOD1P29536 600 aaPredicted RBP10.67□□□□□ -0.7
USP16-202ENST00000399973 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
USP16-202ENST00000399973 BEND3Q5T5X7 828 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 GPC2Q8N158 579 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 MRPL50Q8N5N7 158 aaKnown RBP10.67□□□□□ -0.7
USP16-202ENST00000399973 TTLL11Q8NHH1 800 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 RTFDC1Q9BY42 306 aaPredicted RBP10.67□□□□□ -0.7
USP16-202ENST00000399973 SRCIN1Q9C0H9 1055 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 C9orf78Q9NZ63 289 aaPredicted RBP10.67□□□□□ -0.7
USP16-202ENST00000399973 HACL1Q9UJ83 578 aa10.67□□□□□ -0.7
USP16-202ENST00000399973 RTL9Q8NET4 1388 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 POTECB2RU33 542 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 GRM8O00222 908 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 POTEIP0CG38 1075 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 KIAA2012Q0VF49 1180 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 FSTL1Q12841 308 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms