RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 BEND3Q5T5X7 828 aa17.94■□□□□ 0.46
HLA-DQB1-202ENST00000399079 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
HLA-DQB1-202ENST00000399079 GRAPLQ8TC17 118 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CELF1Q92879 486 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB1-202ENST00000399079 ATP6V0A2Q9Y487 856 aa17.94■□□□□ 0.46
HLA-DQB1-202ENST00000399079 COL4A1P02462 1669 aa17.93■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CC2D2BQ6DHV5 1058 aa17.93■□□□□ 0.46
HLA-DQB1-202ENST00000399079 SLC4A10Q6U841 1118 aa17.93■□□□□ 0.46
HLA-DQB1-202ENST00000399079 SEC31BQ9NQW1 1179 aa17.93■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CDHR2Q9BYE9 1310 aa17.93■□□□□ 0.46
HLA-DQB1-202ENST00000399079 H7C1W4 665 aa17.93■□□□□ 0.46
HLA-DQB1-202ENST00000399079 HSP90B1P14625 803 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-202ENST00000399079 ALDH1L2Q3SY69 923 aa17.92■□□□□ 0.46
HLA-DQB1-202ENST00000399079 PSMD1Q99460 953 aa17.92■□□□□ 0.46
HLA-DQB1-202ENST00000399079 NMRK2Q9NPI5 230 aa17.92■□□□□ 0.46
HLA-DQB1-202ENST00000399079 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CASP7P55210 303 aa17.91■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CCDC152Q4G0S7 254 aa17.91■□□□□ 0.46
HLA-DQB1-202ENST00000399079 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
HLA-DQB1-202ENST00000399079 ZC3H4Q9UPT8 1303 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CT47B1P0C2W7 299 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CTSWP56202 376 aa17.9■□□□□ 0.46
HLA-DQB1-202ENST00000399079 TTLL11Q8NHH1 800 aa17.9■□□□□ 0.46
HLA-DQB1-202ENST00000399079 TMX4Q9H1E5 349 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-202ENST00000399079 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
HLA-DQB1-202ENST00000399079 IARSP41252 1262 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-202ENST00000399079 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-202ENST00000399079 PTPRCP08575 1304 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 KIF3CO14782 793 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 GRIPAP1Q4V328 841 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 GREM2Q9H772 168 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 KDM2BQ8NHM5 1336 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 RARSP54136 660 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 MPNDQ8N594 471 aa17.88■□□□□ 0.45
HLA-DQB1-202ENST00000399079 TMC4Q7Z404 712 aa17.87■□□□□ 0.45
HLA-DQB1-202ENST00000399079 RRAGCQ9HB90 399 aa17.87■□□□□ 0.45
HLA-DQB1-202ENST00000399079 COL4A5P29400 1685 aa17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 GRM8O00222 908 aa17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 ALDH1L1O75891 902 aa17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 DPY19L2Q6NUT2 758 aa17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 PLA2G12BQ9BX93 195 aa17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 C9orf78Q9NZ63 289 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 NOB1Q9ULX3 412 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 NSFL1CQ9UNZ2 370 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-202ENST00000399079 DDNO94850 711 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-202ENST00000399079 AOC3Q16853 763 aa17.85■□□□□ 0.45
HLA-DQB1-202ENST00000399079 LARGE2Q8N3Y3 721 aa17.85■□□□□ 0.45
HLA-DQB1-202ENST00000399079 RTFDC1Q9BY42 306 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-202ENST00000399079 PPIP5K2O43314 1243 aa17.84■□□□□ 0.45
HLA-DQB1-202ENST00000399079 GPSM2P81274 684 aa17.84■□□□□ 0.45
HLA-DQB1-202ENST00000399079 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
HLA-DQB1-202ENST00000399079 ANKRD18AQ8IVF6 992 aa17.84■□□□□ 0.45
HLA-DQB1-202ENST00000399079 JDP2Q8WYK2 163 aa17.84■□□□□ 0.45
HLA-DQB1-202ENST00000399079 ZNF541Q9H0D2 1346 aa17.84■□□□□ 0.45
HLA-DQB1-202ENST00000399079 LRRC37AA6NMS7 1700 aa17.83■□□□□ 0.45
HLA-DQB1-202ENST00000399079 FZD9O00144 591 aa17.83■□□□□ 0.45
HLA-DQB1-202ENST00000399079 CSF1RP07333 972 aa17.83■□□□□ 0.45
HLA-DQB1-202ENST00000399079 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.45
HLA-DQB1-202ENST00000399079 C1QTNF8P60827 252 aa17.83■□□□□ 0.45
HLA-DQB1-202ENST00000399079 FOXO4P98177 505 aa17.83■□□□□ 0.45
HLA-DQB1-202ENST00000399079 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.45
HLA-DQB1-202ENST00000399079 DUOX1Q9NRD9 1551 aa17.83■□□□□ 0.44
HLA-DQB1-202ENST00000399079 MYH3P11055 1940 aa17.83■□□□□ 0.44
HLA-DQB1-202ENST00000399079 ITGA6P23229 1130 aa17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 BRPF1P55201 1214 aaPredicted RBP17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 SUPT20HQ8NEM7 779 aa17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 CDC5LQ99459 802 aaKnown RBP17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 POLLQ9UGP5 575 aa17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 POTECB2RU33 542 aa17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 BCAR3O75815 825 aa17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 GPR101Q96P66 508 aaPredicted RBP17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 RTL9Q8NET4 1388 aa17.82■□□□□ 0.44
HLA-DQB1-202ENST00000399079 C6orf229H3BNL8 230 aa17.81■□□□□ 0.44
HLA-DQB1-202ENST00000399079 KIAA2012Q0VF49 1180 aa17.81■□□□□ 0.44
HLA-DQB1-202ENST00000399079 LMBR1LQ6UX01 489 aa17.81■□□□□ 0.44
HLA-DQB1-202ENST00000399079 KAZALD1Q96I82 304 aa17.81■□□□□ 0.44
HLA-DQB1-202ENST00000399079 ANKIB1Q9P2G1 1089 aa17.81■□□□□ 0.44
HLA-DQB1-202ENST00000399079 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
HLA-DQB1-202ENST00000399079 WTIPA6NIX2 430 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 VEGFAP15692 232 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 NIM1KQ8IY84 436 aa17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 TBC1D16Q8TBP0 767 aa17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 SUCLG2Q96I99 432 aa17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 VPS33BQ9H267 617 aa17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 BSDC1Q9NW68 430 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 UTYO14607 1347 aa17.8■□□□□ 0.44
HLA-DQB1-202ENST00000399079 RIMBP2O15034 1052 aa17.79■□□□□ 0.44
HLA-DQB1-202ENST00000399079 WASHC4Q2M389 1173 aa17.79■□□□□ 0.44
HLA-DQB1-202ENST00000399079 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
HLA-DQB1-202ENST00000399079 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
HLA-DQB1-202ENST00000399079 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
HLA-DQB1-202ENST00000399079 TOMM70O94826 608 aa17.78■□□□□ 0.44
HLA-DQB1-202ENST00000399079 EIF6P56537 245 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-202ENST00000399079 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
HLA-DQB1-202ENST00000399079 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms