RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GRAPQ13588 217 aa21.35■■□□□ 1.01
APTR-201ENST00000398043 GRIPAP1Q4V328 841 aa21.35■■□□□ 1.01
APTR-201ENST00000398043 GRAPLQ8TC17 118 aaPredicted RBP21.35■■□□□ 1.01
APTR-201ENST00000398043 JARID2Q92833 1246 aaPredicted RBP21.35■■□□□ 1.01
APTR-201ENST00000398043 NMRK2Q9NPI5 230 aa21.35■■□□□ 1.01
APTR-201ENST00000398043 H7C1W4 665 aa21.34■■□□□ 1.01
APTR-201ENST00000398043 DDX46Q7L014 1031 aaKnown RBP21.34■■□□□ 1.01
APTR-201ENST00000398043 ZNF277Q9NRM2 450 aaPredicted RBP21.34■■□□□ 1.01
APTR-201ENST00000398043 DUOX1Q9NRD9 1551 aa21.34■■□□□ 1.01
APTR-201ENST00000398043 GLTPD2A6NH11 291 aa21.33■■□□□ 1.01
APTR-201ENST00000398043 PDE8AO60658 829 aa21.33■■□□□ 1.01
APTR-201ENST00000398043 CASP7P55210 303 aa21.33■■□□□ 1.01
APTR-201ENST00000398043 GCKRQ14397 625 aa21.33■■□□□ 1.01
APTR-201ENST00000398043 SP8Q8IXZ3 490 aa21.33■■□□□ 1.01
APTR-201ENST00000398043 LINS1Q8NG48 757 aa21.33■■□□□ 1.01
APTR-201ENST00000398043 F6X3S4 739 aa21.32■■□□□ 1
APTR-201ENST00000398043 MRPL50Q8N5N7 158 aaKnown RBP21.32■■□□□ 1
APTR-201ENST00000398043 CELF1Q92879 486 aaKnown RBP21.32■■□□□ 1
APTR-201ENST00000398043 KDM2BQ8NHM5 1336 aa21.31■■□□□ 1
APTR-201ENST00000398043 HSP90B1P14625 803 aaKnown RBP21.31■■□□□ 1
APTR-201ENST00000398043 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
APTR-201ENST00000398043 C1QTNF8P60827 252 aa21.31■■□□□ 1
APTR-201ENST00000398043 BEND3Q5T5X7 828 aa21.31■■□□□ 1
APTR-201ENST00000398043 RTFDC1Q9BY42 306 aaPredicted RBP21.31■■□□□ 1
APTR-201ENST00000398043 SCN4AP35499 1836 aa21.3■■□□□ 1
APTR-201ENST00000398043 TMC4Q7Z404 712 aa21.3■■□□□ 1
APTR-201ENST00000398043 SSH1Q8WYL5 1049 aa21.3■■□□□ 1
APTR-201ENST00000398043 PLA2G12BQ9BX93 195 aa21.29■■□□□ 1
APTR-201ENST00000398043 SEC31BQ9NQW1 1179 aa21.29■■□□□ 1
APTR-201ENST00000398043 POTECB2RU33 542 aa21.28■■□□□ 1
APTR-201ENST00000398043 CTSWP56202 376 aa21.28■■□□□ 1
APTR-201ENST00000398043 UBE3BQ7Z3V4 1068 aa21.28■■□□□ 1
APTR-201ENST00000398043 TTLL11Q8NHH1 800 aa21.28■■□□□ 1
APTR-201ENST00000398043 FZD9O00144 591 aa21.27■■□□□ 1
APTR-201ENST00000398043 CT47B1P0C2W7 299 aaPredicted RBP21.27■■□□□ 1
APTR-201ENST00000398043 RPS8P62241 208 aaKnown RBP21.27■■□□□ 1
APTR-201ENST00000398043 ALDH1L2Q3SY69 923 aa21.27■■□□□ 1
APTR-201ENST00000398043 RRAGCQ9HB90 399 aa21.27■■□□□ 1
APTR-201ENST00000398043 RTL9Q8NET4 1388 aa21.26■□□□□ 0.99
APTR-201ENST00000398043 CCDC152Q4G0S7 254 aa21.26■□□□□ 0.99
APTR-201ENST00000398043 VPS33BQ9H267 617 aa21.26■□□□□ 0.99
APTR-201ENST00000398043 ZNF541Q9H0D2 1346 aa21.26■□□□□ 0.99
APTR-201ENST00000398043 DPY19L2Q6NUT2 758 aa21.25■□□□□ 0.99
APTR-201ENST00000398043 MPNDQ8N594 471 aa21.25■□□□□ 0.99
APTR-201ENST00000398043 A0A1B0GUL6 1792 aa21.25■□□□□ 0.99
APTR-201ENST00000398043 DDNO94850 711 aaPredicted RBP21.24■□□□□ 0.99
APTR-201ENST00000398043 PTPRCP08575 1304 aa21.24■□□□□ 0.99
APTR-201ENST00000398043 ALDH1L1O75891 902 aa21.23■□□□□ 0.99
APTR-201ENST00000398043 TOMM70O94826 608 aa21.23■□□□□ 0.99
APTR-201ENST00000398043 CSF1RP07333 972 aa21.23■□□□□ 0.99
APTR-201ENST00000398043 BRPF1P55201 1214 aaPredicted RBP21.23■□□□□ 0.99
APTR-201ENST00000398043 DPP8Q6V1X1 898 aaPredicted RBP21.23■□□□□ 0.99
APTR-201ENST00000398043 CCDC85AQ96PX6 553 aaPredicted RBP21.23■□□□□ 0.99
APTR-201ENST00000398043 BCL2L13Q9BXK5 485 aa21.23■□□□□ 0.99
APTR-201ENST00000398043 TMX4Q9H1E5 349 aaPredicted RBP21.23■□□□□ 0.99
APTR-201ENST00000398043 GREM2Q9H772 168 aa21.23■□□□□ 0.99
APTR-201ENST00000398043 GPSM2P81274 684 aa21.22■□□□□ 0.99
APTR-201ENST00000398043 AOC3Q16853 763 aa21.22■□□□□ 0.99
APTR-201ENST00000398043 SUPT20HQ8NEM7 779 aa21.22■□□□□ 0.99
APTR-201ENST00000398043 L3MBTL3Q96JM7 780 aaPredicted RBP21.22■□□□□ 0.99
APTR-201ENST00000398043 SCN9AQ15858 1988 aa21.22■□□□□ 0.99
APTR-201ENST00000398043 PSME4Q14997 1843 aa21.22■□□□□ 0.99
APTR-201ENST00000398043 VEGFAP15692 232 aaPredicted RBP21.21■□□□□ 0.99
APTR-201ENST00000398043 FOXO4P98177 505 aa21.21■□□□□ 0.99
APTR-201ENST00000398043 HNRNPUQ00839 825 aaKnown RBP eCLIP21.21■□□□□ 0.99
APTR-201ENST00000398043 KIAA2012Q0VF49 1180 aa21.21■□□□□ 0.99
APTR-201ENST00000398043 LARGE2Q8N3Y3 721 aa21.21■□□□□ 0.99
APTR-201ENST00000398043 PODXL2Q9NZ53 605 aa21.21■□□□□ 0.99
APTR-201ENST00000398043 GRM8O00222 908 aa21.2■□□□□ 0.98
APTR-201ENST00000398043 PPIP5K2O43314 1243 aa21.2■□□□□ 0.98
APTR-201ENST00000398043 SLC4A10Q6U841 1118 aa21.2■□□□□ 0.98
APTR-201ENST00000398043 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
APTR-201ENST00000398043 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
APTR-201ENST00000398043 SRCIN1Q9C0H9 1055 aa21.2■□□□□ 0.98
APTR-201ENST00000398043 POLLQ9UGP5 575 aa21.2■□□□□ 0.98
APTR-201ENST00000398043 UTYO14607 1347 aa21.2■□□□□ 0.98
APTR-201ENST00000398043 ADAMTSL1Q8N6G6 1762 aa21.19■□□□□ 0.98
APTR-201ENST00000398043 RARSP54136 660 aaKnown RBP21.19■□□□□ 0.98
APTR-201ENST00000398043 ANKRD18AQ8IVF6 992 aa21.19■□□□□ 0.98
APTR-201ENST00000398043 SMC4Q9NTJ3 1288 aa21.19■□□□□ 0.98
APTR-201ENST00000398043 NSFL1CQ9UNZ2 370 aaKnown RBP21.19■□□□□ 0.98
APTR-201ENST00000398043 EPHA10Q5JZY3 1008 aa21.18■□□□□ 0.98
APTR-201ENST00000398043 GPC2Q8N158 579 aa21.18■□□□□ 0.98
APTR-201ENST00000398043 CDC5LQ99459 802 aaKnown RBP21.18■□□□□ 0.98
APTR-201ENST00000398043 FAM161AQ3B820 660 aa21.17■□□□□ 0.98
APTR-201ENST00000398043 NIM1KQ8IY84 436 aa21.17■□□□□ 0.98
APTR-201ENST00000398043 TBC1D16Q8TBP0 767 aa21.17■□□□□ 0.98
APTR-201ENST00000398043 KAZALD1Q96I82 304 aa21.17■□□□□ 0.98
APTR-201ENST00000398043 BSDC1Q9NW68 430 aaPredicted RBP21.17■□□□□ 0.98
APTR-201ENST00000398043 ZNF646O15015 1829 aaPredicted RBP21.17■□□□□ 0.98
APTR-201ENST00000398043 ITGA6P23229 1130 aa21.16■□□□□ 0.98
APTR-201ENST00000398043 ZBED9Q6R2W3 1325 aa21.15■□□□□ 0.98
APTR-201ENST00000398043 NBPF7P0C2Y1 421 aaPredicted RBP21.15■□□□□ 0.98
APTR-201ENST00000398043 C9orf78Q9NZ63 289 aaPredicted RBP21.15■□□□□ 0.98
APTR-201ENST00000398043 ZNRF3Q9ULT6 936 aa21.15■□□□□ 0.98
APTR-201ENST00000398043 MINPP1Q9UNW1 487 aa21.15■□□□□ 0.98
APTR-201ENST00000398043 YDJCA8MPS7 323 aa21.14■□□□□ 0.97
APTR-201ENST00000398043 EIF6P56537 245 aaKnown RBP21.14■□□□□ 0.97
APTR-201ENST00000398043 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
APTR-201ENST00000398043 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms